More than 300 homologs were found in PanDaTox collection
for query gene Dred_2864 on replicon NC_009253
Organism: Desulfotomaculum reducens MI-1



Page 1 of 3    << first  < prev  1  2  3    next >  last >>   


Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_009253  Dred_2864  Fis family transcriptional regulator  100 
 
 
191 aa  384  1e-106  Desulfotomaculum reducens MI-1  Bacteria  hitchhiker  0.0000561884  n/a   
 
 
-
 
NC_013216  Dtox_3761  response regulator receiver and ANTAR domain protein  41.27 
 
 
194 aa  154  7e-37  Desulfotomaculum acetoxidans DSM 771  Bacteria  hitchhiker  0.0000015775  normal 
 
 
-
 
NC_009972  Haur_4203  response regulator receiver/ANTAR domain-containing protein  41.18 
 
 
195 aa  154  8e-37  Herpetosiphon aurantiacus ATCC 23779  Bacteria  normal  0.793788  n/a   
 
 
-
 
NC_011831  Cagg_2047  response regulator receiver and ANTAR domain protein  39.57 
 
 
191 aa  147  6e-35  Chloroflexus aggregans DSM 9485  Bacteria  unclonable  0.000000169009  normal 
 
 
-
 
NC_007644  Moth_1295  response regulator receiver/ANTAR domain-containing protein  39.04 
 
 
208 aa  146  2.0000000000000003e-34  Moorella thermoacetica ATCC 39073  Bacteria  normal  0.153579  normal  0.0128304 
 
 
-
 
NC_009253  Dred_2808  response regulator receiver/ANTAR domain-containing protein  39.15 
 
 
220 aa  146  2.0000000000000003e-34  Desulfotomaculum reducens MI-1  Bacteria  decreased coverage  0.00041222  n/a   
 
 
-
 
NC_009523  RoseRS_4102  response regulator receiver/ANTAR domain-containing protein  37.91 
 
 
194 aa  143  1e-33  Roseiflexus sp. RS-1  Bacteria  normal  normal 
 
 
-
 
NC_011661  Dtur_1110  response regulator receiver and ANTAR domain protein  36.36 
 
 
197 aa  143  2e-33  Dictyoglomus turgidum DSM 6724  Bacteria  normal  0.0520878  n/a   
 
 
-
 
NC_009767  Rcas_3658  response regulator receiver/ANTAR domain-containing protein  37.36 
 
 
194 aa  142  3e-33  Roseiflexus castenholzii DSM 13941  Bacteria  normal  normal  0.568485 
 
 
-
 
NC_013216  Dtox_3764  response regulator receiver and ANTAR domain protein  36.61 
 
 
194 aa  139  1.9999999999999998e-32  Desulfotomaculum acetoxidans DSM 771  Bacteria  normal  0.0425638  normal 
 
 
-
 
NC_010424  Daud_2028  response regulator receiver/ANTAR domain-containing protein  37.84 
 
 
192 aa  129  2.0000000000000002e-29  Candidatus Desulforudis audaxviator MP104C  Bacteria  hitchhiker  0.000049817  n/a   
 
 
-
 
NC_014165  Tbis_1468  response regulator receiver and ANTAR domain-containing protein  36.9 
 
 
197 aa  128  5.0000000000000004e-29  Thermobispora bispora DSM 43833  Bacteria  normal  normal 
 
 
-
 
NC_013595  Sros_2955  response regulator  36.56 
 
 
199 aa  127  1.0000000000000001e-28  Streptosporangium roseum DSM 43021  Bacteria  normal  normal 
 
 
-
 
NC_008578  Acel_1081  response regulator receiver/ANTAR domain-containing protein  38.1 
 
 
247 aa  127  1.0000000000000001e-28  Acidothermus cellulolyticus 11B  Bacteria  normal  normal 
 
 
-
 
NC_013131  Caci_5687  response regulator receiver and ANTAR domain protein  34.41 
 
 
210 aa  123  2e-27  Catenulispora acidiphila DSM 44928  Bacteria  normal  normal 
 
 
-
 
NC_013159  Svir_25990  response regulator with putative antiterminator output domain protein  37.16 
 
 
204 aa  123  2e-27  Saccharomonospora viridis DSM 43017  Bacteria  normal  normal 
 
 
-
 
NC_010424  Daud_2031  response regulator receiver/ANTAR domain-containing protein  35.91 
 
 
198 aa  123  2e-27  Candidatus Desulforudis audaxviator MP104C  Bacteria  unclonable  0.00000000027462  n/a   
 
 
-
 
NC_007333  Tfu_1181  response regulator receiver  36.26 
 
 
207 aa  122  3e-27  Thermobifida fusca YX  Bacteria  normal  0.928438  n/a   
 
 
-
 
NC_009921  Franean1_2035  response regulator receiver/ANTAR domain-containing protein  34.95 
 
 
199 aa  122  3e-27  Frankia sp. EAN1pec  Bacteria  normal  normal  0.480822 
 
 
-
 
NC_011831  Cagg_2517  response regulator receiver and ANTAR domain protein  33.51 
 
 
194 aa  121  5e-27  Chloroflexus aggregans DSM 9485  Bacteria  normal  normal 
 
 
-
 
NC_013093  Amir_5540  response regulator receiver and ANTAR domain protein  36.61 
 
 
200 aa  121  7e-27  Actinosynnema mirum DSM 43827  Bacteria  normal  n/a   
 
 
-
 
NC_013757  Gobs_3208  response regulator receiver and ANTAR domain protein  37.36 
 
 
200 aa  120  9.999999999999999e-27  Geodermatophilus obscurus DSM 43160  Bacteria  normal  n/a   
 
 
-
 
NC_013510  Tcur_2860  response regulator receiver and ANTAR domain protein  35.68 
 
 
214 aa  119  1.9999999999999998e-26  Thermomonospora curvata DSM 43183  Bacteria  normal  0.153721  n/a   
 
 
-
 
NC_007777  Francci3_1618  response regulator receiver/ANTAR domain-containing protein  33.87 
 
 
199 aa  119  1.9999999999999998e-26  Frankia sp. CcI3  Bacteria  normal  0.144201  normal  0.292856 
 
 
-
 
NC_013441  Gbro_2893  response regulator receiver  34.62 
 
 
206 aa  120  1.9999999999999998e-26  Gordonia bronchialis DSM 43247  Bacteria  normal  0.723289  n/a   
 
 
-
 
NC_008146  Mmcs_3021  response regulator receiver/ANTAR domain-containing protein  36.61 
 
 
210 aa  119  1.9999999999999998e-26  Mycobacterium sp. MCS  Bacteria  normal  n/a   
 
 
-
 
NC_008705  Mkms_3067  response regulator receiver/ANTAR domain-containing protein  36.61 
 
 
210 aa  119  1.9999999999999998e-26  Mycobacterium sp. KMS  Bacteria  normal  normal 
 
 
-
 
NC_009077  Mjls_3036  response regulator receiver/ANTAR domain-containing protein  36.61 
 
 
210 aa  119  1.9999999999999998e-26  Mycobacterium sp. JLS  Bacteria  normal  0.222389  normal  0.216241 
 
 
-
 
NC_009380  Strop_3151  response regulator receiver  38.38 
 
 
206 aa  119  3e-26  Salinispora tropica CNB-440  Bacteria  normal  normal  0.332536 
 
 
-
 
NC_009338  Mflv_3575  response regulator receiver/ANTAR domain-containing protein  36.26 
 
 
229 aa  119  3.9999999999999996e-26  Mycobacterium gilvum PYR-GCK  Bacteria  normal  0.10936  normal  0.0183031 
 
 
-
 
NC_008726  Mvan_2840  response regulator receiver/ANTAR domain-containing protein  34.97 
 
 
213 aa  118  6e-26  Mycobacterium vanbaalenii PYR-1  Bacteria  normal  0.0401204  normal 
 
 
-
 
NC_002939  GSU2822  response regulator  35.71 
 
 
191 aa  117  9e-26  Geobacter sulfurreducens PCA  Bacteria  normal  n/a   
 
 
-
 
NC_011886  Achl_1689  response regulator receiver and ANTAR domain protein  34.43 
 
 
201 aa  115  3e-25  Arthrobacter chlorophenolicus A6  Bacteria  n/a    hitchhiker  0.00000385738 
 
 
-
 
NC_009565  TBFG_11642  two component system transcriptional regulator  36.07 
 
 
205 aa  115  3.9999999999999997e-25  Mycobacterium tuberculosis F11  Bacteria  normal  0.0378541  normal  0.634495 
 
 
-
 
NC_008541  Arth_1694  response regulator receiver/ANTAR domain-containing protein  34.43 
 
 
201 aa  115  3.9999999999999997e-25  Arthrobacter sp. FB24  Bacteria  normal  0.136848  n/a   
 
 
-
 
NC_014210  Ndas_3159  response regulator receiver and ANTAR domain protein  34.62 
 
 
212 aa  115  3.9999999999999997e-25  Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111  Bacteria  normal  normal 
 
 
-
 
NC_013174  Jden_1223  response regulator receiver and ANTAR domain protein  34.97 
 
 
229 aa  115  5e-25  Jonesia denitrificans DSM 20603  Bacteria  normal  normal  0.788892 
 
 
-
 
NC_009953  Sare_3378  response regulator receiver/ANTAR domain-containing protein  37.84 
 
 
206 aa  115  5e-25  Salinispora arenicola CNS-205  Bacteria  normal  normal  0.0248143 
 
 
-
 
NC_007498  Pcar_2091  response regulator  34.25 
 
 
187 aa  114  6e-25  Pelobacter carbinolicus DSM 2380  Bacteria  normal  n/a   
 
 
-
 
NC_012669  Bcav_2208  response regulator receiver and ANTAR domain protein  33.33 
 
 
220 aa  115  6e-25  Beutenbergia cavernae DSM 12333  Bacteria  normal  normal 
 
 
-
 
NC_009664  Krad_2958  response regulator receiver and ANTAR domain protein  34.41 
 
 
229 aa  114  6.9999999999999995e-25  Kineococcus radiotolerans SRS30216  Bacteria  normal  0.799557  normal  0.502809 
 
 
-
 
NC_013172  Bfae_14950  response regulator with putative antiterminator output domain  33.15 
 
 
215 aa  114  7.999999999999999e-25  Brachybacterium faecium DSM 4810  Bacteria  normal  0.117628  n/a   
 
 
-
 
NC_014158  Tpau_2483  response regulator receiver and ANTAR domain protein  34.62 
 
 
205 aa  113  1.0000000000000001e-24  Tsukamurella paurometabola DSM 20162  Bacteria  normal  n/a   
 
 
-
 
NC_014151  Cfla_1977  response regulator receiver and ANTAR domain protein  34.97 
 
 
227 aa  112  2.0000000000000002e-24  Cellulomonas flavigena DSM 20109  Bacteria  normal  0.239234  normal 
 
 
-
 
NC_009483  Gura_1146  response regulator receiver/ANTAR domain-containing protein  31.55 
 
 
188 aa  112  4.0000000000000004e-24  Geobacter uraniireducens Rf4  Bacteria  decreased coverage  0.00000000356105  n/a   
 
 
-
 
NC_012803  Mlut_11030  response regulator with putative antiterminator output domain  34.07 
 
 
198 aa  112  5e-24  Micrococcus luteus NCTC 2665  Bacteria  normal  0.241703  n/a   
 
 
-
 
NC_013235  Namu_3061  response regulator receiver and ANTAR domain protein  32.79 
 
 
194 aa  111  7.000000000000001e-24  Nakamurella multipartita DSM 44233  Bacteria  hitchhiker  0.00113676  hitchhiker  0.000689676 
 
 
-
 
NC_007517  Gmet_0660  response regulator receiver/ANTAR domain-containing protein  32.74 
 
 
202 aa  110  1.0000000000000001e-23  Geobacter metallireducens GS-15  Bacteria  normal  0.132289  normal  0.0166929 
 
 
-
 
NC_008261  CPF_0888  response regulator  32.63 
 
 
191 aa  110  1.0000000000000001e-23  Clostridium perfringens ATCC 13124  Bacteria  normal  n/a   
 
 
-
 
NC_013124  Afer_1081  response regulator receiver and ANTAR domain protein  33.33 
 
 
203 aa  107  1e-22  Acidimicrobium ferrooxidans DSM 10331  Bacteria  normal  n/a   
 
 
-
 
NC_013521  Sked_20250  response regulator with putative antiterminator output domain  33.33 
 
 
226 aa  107  2e-22  Sanguibacter keddieii DSM 10542  Bacteria  normal  normal  0.0947543 
 
 
-
 
NC_011831  Cagg_2933  response regulator receiver and ANTAR domain protein  34.22 
 
 
194 aa  107  2e-22  Chloroflexus aggregans DSM 9485  Bacteria  normal  0.0803562  normal  0.225953 
 
 
-
 
NC_013530  Xcel_1506  response regulator receiver and ANTAR domain protein  33.33 
 
 
220 aa  106  3e-22  Xylanimonas cellulosilytica DSM 15894  Bacteria  normal  n/a   
 
 
-
 
NC_008699  Noca_3018  response regulator receiver  35.87 
 
 
207 aa  104  6e-22  Nocardioides sp. JS614  Bacteria  normal  n/a   
 
 
-
 
NC_010320  Teth514_2177  response regulator receiver/ANTAR domain-containing protein  31.52 
 
 
190 aa  102  2e-21  Thermoanaerobacter sp. X514  Bacteria  normal  n/a   
 
 
-
 
NC_013721  HMPREF0424_0616  response regulator receiver domain protein  30.92 
 
 
249 aa  101  5e-21  Gardnerella vaginalis 409-05  Bacteria  n/a    normal 
 
 
-
 
NC_009767  Rcas_3118  response regulator receiver/ANTAR domain-containing protein  30.48 
 
 
196 aa  102  5e-21  Roseiflexus castenholzii DSM 13941  Bacteria  normal  normal 
 
 
-
 
NC_013947  Snas_3775  response regulator receiver and ANTAR domain-containing protein  32.79 
 
 
207 aa  101  6e-21  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  0.665226  normal  0.0118196 
 
 
-
 
NC_010816  BLD_0739  putative response regulator  31.86 
 
 
261 aa  101  6e-21  Bifidobacterium longum DJO10A  Bacteria  hitchhiker  0.000540248  n/a   
 
 
-
 
NC_013739  Cwoe_5028  response regulator receiver and ANTAR domain protein  32.79 
 
 
198 aa  99.4  3e-20  Conexibacter woesei DSM 14684  Bacteria  normal  0.181706  normal  0.0113639 
 
 
-
 
NC_013169  Ksed_12950  response regulator with putative antiterminator output domain  31.38 
 
 
189 aa  99.4  3e-20  Kytococcus sedentarius DSM 20547  Bacteria  normal  0.22629  normal  0.269406 
 
 
-
 
NC_009253  Dred_2811  response regulator receiver/ANTAR domain-containing protein  29.73 
 
 
191 aa  99  4e-20  Desulfotomaculum reducens MI-1  Bacteria  hitchhiker  0.00444481  n/a   
 
 
-
 
NC_009523  RoseRS_2361  response regulator receiver/ANTAR domain-containing protein  28.88 
 
 
196 aa  98.2  6e-20  Roseiflexus sp. RS-1  Bacteria  normal  normal 
 
 
-
 
NC_013385  Adeg_1890  response regulator receiver and ANTAR domain protein  32.63 
 
 
197 aa  97.8  8e-20  Ammonifex degensii KC4  Bacteria  normal  0.0366782  n/a   
 
 
-
 
NC_009972  Haur_4357  response regulator receiver/ANTAR domain-containing protein  29.73 
 
 
198 aa  92.8  3e-18  Herpetosiphon aurantiacus ATCC 23779  Bacteria  normal  0.480943  n/a   
 
 
-
 
NC_010003  Pmob_0297  response regulator receiver/ANTAR domain-containing protein  28.88 
 
 
195 aa  92.4  4e-18  Petrotoga mobilis SJ95  Bacteria  normal  0.719259  n/a   
 
 
-
 
NC_013517  Sterm_1051  response regulator receiver and ANTAR domain protein  26.06 
 
 
192 aa  92  5e-18  Sebaldella termitidis ATCC 33386  Bacteria  normal  n/a   
 
 
-
 
NC_008609  Ppro_3459  response regulator receiver/ANTAR domain-containing protein  28.11 
 
 
205 aa  90.9  1e-17  Pelobacter propionicus DSM 2379  Bacteria  normal  n/a   
 
 
-
 
NC_002977  MCA0588  response regulator NasT  28.95 
 
 
191 aa  89.7  2e-17  Methylococcus capsulatus str. Bath  Bacteria  normal  0.419145  n/a   
 
 
-
 
NC_012034  Athe_0569  response regulator receiver and ANTAR domain protein  28.26 
 
 
194 aa  89.4  3e-17  Anaerocellum thermophilum DSM 6725  Bacteria  hitchhiker  0.000937079  n/a   
 
 
-
 
NC_013517  Sterm_0084  response regulator receiver and ANTAR domain protein  27.17 
 
 
242 aa  88.6  5e-17  Sebaldella termitidis ATCC 33386  Bacteria  normal  0.682854  n/a   
 
 
-
 
NC_010718  Nther_0963  response regulator receiver and ANTAR domain protein  29.03 
 
 
191 aa  87.8  8e-17  Natranaerobius thermophilus JW/NM-WN-LF  Bacteria  hitchhiker  0.0000231614  normal 
 
 
-
 
NC_009720  Xaut_2506  response regulator receiver/ANTAR domain-containing protein  29.95 
 
 
221 aa  86.3  2e-16  Xanthobacter autotrophicus Py2  Bacteria  normal  0.187461  normal 
 
 
-
 
NC_009620  Smed_4528  response regulator receiver/ANTAR domain-containing protein  32.65 
 
 
196 aa  84.7  7e-16  Sinorhizobium medicae WSM419  Bacteria  normal  normal 
 
 
-
 
NC_009253  Dred_1289  response regulator receiver/ANTAR domain-containing protein  27.03 
 
 
221 aa  84.3  9e-16  Desulfotomaculum reducens MI-1  Bacteria  normal  0.132207  n/a   
 
 
-
 
NC_007520  Tcr_1151  response regulator receiver/ANTAR domain-containing protein  24.73 
 
 
195 aa  83.2  0.000000000000002  Thiomicrospira crunogena XCL-2  Bacteria  normal  n/a   
 
 
-
 
NC_011369  Rleg2_1455  response regulator receiver and ANTAR domain protein  30.61 
 
 
195 aa  82.4  0.000000000000003  Rhizobium leguminosarum bv. trifolii WSM2304  Bacteria  normal  normal  0.770993 
 
 
-
 
NC_007925  RPC_1211  response regulator receiver/ANTAR domain-containing protein  28.8 
 
 
194 aa  82.8  0.000000000000003  Rhodopseudomonas palustris BisB18  Bacteria  normal  normal 
 
 
-
 
NC_009485  BBta_4139  response regulator receiver/ANTAR domain-containing protein  27.75 
 
 
196 aa  82.4  0.000000000000004  Bradyrhizobium sp. BTAi1  Bacteria  normal  normal  0.214536 
 
 
-
 
NC_011004  Rpal_4227  response regulator receiver and ANTAR domain protein  29.08 
 
 
194 aa  82.4  0.000000000000004  Rhodopseudomonas palustris TIE-1  Bacteria  normal  0.0711042  n/a   
 
 
-
 
NC_012850  Rleg_1632  response regulator receiver and ANTAR domain protein  31.29 
 
 
207 aa  82  0.000000000000005  Rhizobium leguminosarum bv. trifolii WSM1325  Bacteria  normal  normal  0.0623893 
 
 
-
 
NC_007778  RPB_1762  response regulator receiver/ANTAR domain-containing protein  27.75 
 
 
194 aa  81.6  0.000000000000007  Rhodopseudomonas palustris HaA2  Bacteria  normal  0.48447  normal  0.0125916 
 
 
-
 
NC_010676  Bphyt_5673  response regulator receiver and ANTAR domain protein  27.27 
 
 
191 aa  76.6  0.0000000000002  Burkholderia phytofirmans PsJN  Bacteria  normal  normal  0.598594 
 
 
-
 
NC_010511  M446_3741  response regulator receiver/ANTAR domain-containing protein  28.72 
 
 
202 aa  76.3  0.0000000000002  Methylobacterium sp. 4-46  Bacteria  normal  0.755024  normal  0.109153 
 
 
-
 
NC_009654  Mmwyl1_2821  response regulator receiver/ANTAR domain-containing protein  26.34 
 
 
224 aa  75.9  0.0000000000004  Marinomonas sp. MWYL1  Bacteria  normal  0.41961  normal  0.477248 
 
 
-
 
NC_010172  Mext_4498  ANTAR domain-containing protein  28.08 
 
 
195 aa  74.7  0.0000000000007  Methylobacterium extorquens PA1  Bacteria  normal  normal 
 
 
-
 
NC_011894  Mnod_2871  response regulator receiver and ANTAR domain protein  30.61 
 
 
204 aa  74.7  0.0000000000008  Methylobacterium nodulans ORS 2060  Bacteria  normal  0.372726  n/a   
 
 
-
 
NC_011988  Avi_5900  two component response regulator  28.57 
 
 
195 aa  74.3  0.0000000000009  Agrobacterium vitis S4  Bacteria  normal  n/a   
 
 
-
 
NC_009952  Dshi_1661  transcription antitermination regulatory protein  29.37 
 
 
194 aa  74.3  0.000000000001  Dinoroseobacter shibae DFL 12  Bacteria  normal  hitchhiker  0.00275655 
 
 
-
 
NC_010725  Mpop_5014  response regulator receiver and ANTAR domain protein  27.97 
 
 
195 aa  73.2  0.000000000002  Methylobacterium populi BJ001  Bacteria  normal  normal  0.757534 
 
 
-
 
NC_013235  Namu_2394  response regulator receiver and ANTAR domain protein  28.57 
 
 
218 aa  73.2  0.000000000002  Nakamurella multipartita DSM 44233  Bacteria  hitchhiker  0.00108275  hitchhiker  0.000509226 
 
 
-
 
NC_008254  Meso_1448  response regulator receiver/ANTAR domain-containing protein  28.57 
 
 
196 aa  73.2  0.000000000002  Chelativorans sp. BNC1  Bacteria  normal  n/a   
 
 
-
 
NC_011757  Mchl_4961  response regulator receiver and ANTAR domain protein  28.08 
 
 
195 aa  73.6  0.000000000002  Methylobacterium chloromethanicum CM4  Bacteria  normal  normal  0.044252 
 
 
-
 
NC_009253  Dred_1293  response regulator receiver protein  29.63 
 
 
159 aa  72  0.000000000004  Desulfotomaculum reducens MI-1  Bacteria  normal  n/a   
 
 
-
 
NC_010623  Bphy_3445  response regulator receiver/ANTAR domain-containing protein  26.32 
 
 
191 aa  72  0.000000000004  Burkholderia phymatum STM815  Bacteria  normal  normal 
 
 
-
 
NC_013235  Namu_0678  response regulator receiver and ANTAR domain protein  27.81 
 
 
243 aa  72.4  0.000000000004  Nakamurella multipartita DSM 44233  Bacteria  normal  normal 
 
 
-
 
NC_006349  BMAA1090  response regulator NasT  25.81 
 
 
198 aa  71.6  0.000000000006  Burkholderia mallei ATCC 23344  Bacteria  normal  0.0864919  n/a   
 
 
-
 
NC_007435  BURPS1710b_A0246  response regulator NasT  25.81 
 
 
198 aa  71.6  0.000000000006  Burkholderia pseudomallei 1710b  Bacteria  normal  n/a   
 
 
-
 
NC_009079  BMA10247_A1255  response regulator/ANTAR domain-containing protein  25.81 
 
 
198 aa  71.6  0.000000000006  Burkholderia mallei NCTC 10247  Bacteria  normal  0.0422038  n/a   
 
 
-
 
NC_009078  BURPS1106A_A1670  response regulator/ANTAR domain-containing protein  25.81 
 
 
198 aa  71.6  0.000000000006  Burkholderia pseudomallei 1106a  Bacteria  normal  n/a   
 
 
-
 
Page 1 of 3    << first  < prev  1  2  3    next >  last >>