Gene Mboo_1242 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMboo_1242 
Symbol 
ID5409926 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCandidatus Methanoregula boonei 6A8 
KingdomArchaea 
Replicon accessionNC_009712 
Strand
Start bp1261826 
End bp1263244 
Gene Length1419 bp 
Protein Length472 aa 
Translation table11 
GC content55% 
IMG OID640868470 
Productmulti-sensor signal transduction histidine kinase 
Protein accessionYP_001404403 
Protein GI154150785 
COG category[T] Signal transduction mechanisms 
COG ID[COG0642] Signal transduction histidine kinase 
TIGRFAM ID[TIGR00229] PAS domain S-box 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value0.41521 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones42 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCGGCCG CACGGATTCT GATCGTTGAA GACGAACGGC TGGTAGCAGA AGACATTAAG 
CTCACACTTC TTGGCTTTGG CTACCAGATC GCCGGCATTA CGACCACCGG GGAGGAAGCG
ATCCGGCTCG CCCGTGATGC AACTCCTGAC CTGATCCTGA TGGATATCCA TCTTGCCGGG
ACCATAAACG GGATCGCTGC CGCTGAAGAG ATACAGAAGT TTTCTGCGGT CCCGGTGGTG
TACCTGACCG CATTTGCCGA CGAGAACATT ACAGCGCAGG CCAAGATCAC GCAGCCGTAC
GGCTATATCA TCAAGCCTTA TGATGAGCGC GAACTGCGCA CGGTCATCGA GTTCTCCCTG
TTCAAATCCC AGCTTGACCA GAAACTTAAG GAAAGCGAGG AGAAGTACCG TGCCCTTGCC
GAGAACACCG CCGATGTCCT ATTTGCGCTG GATGTAAACG GTATTGTCAC CTACATCTCG
CCGCACGTAA ACAAGTACGG CTATCTGGTC GAAGATCTGG TTCTTGGAGG TTTCTGCGAT
TTTGTCTACC CGCAGGACAG GAAGATCGTG CGGGAGAATT TTCTGAAGGT TCTCTCGTGC
GAACGGCAGG AAAGTACCGT GTTCAGGGTC GTGGACAAAT GGGGGTACAT TCACTGGGTG
GAAGAGCGCA GCACGGTCAG GATGGATGTA TACGGCAGGC CGATCGGGAT TTACGGCACC
CTCCGGGATA TCACGGACCG CCGGCGGGCC GAAGAAAGTT TTGTGCTTGC CAATAAGAAA
CTCAACCTGT TAAATAACAT CACCCGGCAT GACATCCTCA ACACCATCAC CGGGCTTCTA
GGCCTCATTG ACATGTCTCT GGCAAGCAAA GAGATGGCGG AACGCGATGA ACTGCTCCAG
GAGATCAAAA ATTCCGTGGA GATCATCCAG CACCAGATCT CCTTTACCCG GGAGTACCAG
GAAGTAGGAG TGAATGCCCC GATCTGGCAG GAGGCAGAGG CAATCCTGCA GCGGGTTATC
CCCGATTGTT CCCGGCCGGG AATTGCCATT GTCTCGCAGG TCAAAGGGAT TGGGATCTTT
GCTGATCCGC TGCTGGAAAA AGTCTTCTAC AACCTGATCG ATAACGCACT ACGGTACGGA
GGGGAGACTC TCACAACCGT CACCTTTTTC GAGCAGGTCT CCGATGAGGG GCTGATCCTT
GTCTGCGAGG ATAACGGCGC AGGTATCCCG CCGGAAGAAA AGAAGAAGGT CTTCGAGCGC
GGGATTGGGA AGAACACCGG CATGGGCCTG TTTCTCACAC GGGAGATCCT GCTGATCACC
GGGATCACGA TTCGCGAGAC CGGGATCTTG GGGAAAGGCG CACGTTTCGA GATCCTGATT
CCCAACGGGG CCTGGCGGCT TACAAAGACA AATGTGTGA
 
Protein sequence
MAAARILIVE DERLVAEDIK LTLLGFGYQI AGITTTGEEA IRLARDATPD LILMDIHLAG 
TINGIAAAEE IQKFSAVPVV YLTAFADENI TAQAKITQPY GYIIKPYDER ELRTVIEFSL
FKSQLDQKLK ESEEKYRALA ENTADVLFAL DVNGIVTYIS PHVNKYGYLV EDLVLGGFCD
FVYPQDRKIV RENFLKVLSC ERQESTVFRV VDKWGYIHWV EERSTVRMDV YGRPIGIYGT
LRDITDRRRA EESFVLANKK LNLLNNITRH DILNTITGLL GLIDMSLASK EMAERDELLQ
EIKNSVEIIQ HQISFTREYQ EVGVNAPIWQ EAEAILQRVI PDCSRPGIAI VSQVKGIGIF
ADPLLEKVFY NLIDNALRYG GETLTTVTFF EQVSDEGLIL VCEDNGAGIP PEEKKKVFER
GIGKNTGMGL FLTREILLIT GITIRETGIL GKGARFEILI PNGAWRLTKT NV