Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Slin_3671 |
Symbol | |
ID | 8727424 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Spirosoma linguale DSM 74 |
Kingdom | Bacteria |
Replicon accession | NC_013730 |
Strand | + |
Start bp | 4431301 |
End bp | 4433274 |
Gene Length | 1974 bp |
Protein Length | 657 aa |
Translation table | 11 |
GC content | 47% |
IMG OID | |
Product | Sigma 54 interacting domain protein |
Protein accession | YP_003388476 |
Protein GI | 284038546 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 25 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 40 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAGCACCA GGATACTGAT TGTTGAGGAT GAGTTTGTGG TAGCCAATTC GCTCCGTATC CTGTTAAGGC AGGCTGGCTA CCATGTGAGT GGTATCGCCA CTTCGGCTGA GGAAGCGTAT GCCATTTTAC AAAAGGATAA ACCCCACCTT GTGCTGCTAG ATATCCGATT GAATGGAAGC GAGTCGGGCA TTGATCTGGC CCGAAAGCTA AAAGCGGAAC ATATTGCCTT TGTTTATTTA TCCGCCAATT CAAGTCAAAA AGTACTGGAA GAAGCGAAAA AAACCGAACC CTACGGCTTT CTCGTCAAGC CATTCAGGGA GAAAGATCTG CTGGTGGCCC TGGATATTGC CCTGTATCTC CATAAGAACA GGCTCGAGTC AAAGTTGCGG CAGGAAGCCC TTCTGGAAAG ACAACTATTG GAAATTAGCC AGAATGCCTT GAACGCCAAG CAGACGTTTT TACAGATTGC ACGGGCTATT CGAACGGTTA TTCCCTTTGA TCTCATAGTA TGTGGAACCA GACCATTTAC GGCTTCCCGG TTTGGTGATT ACGGCTATTT ACGCGTCGGA CTTGATGACT ATCAGTTCAT CGGTAGGGAT GAGCTACTGA CCATTTCGGG TTTAAAAAGT GACGCCTTAT CCAATATCAT TGAAAACAGT CATACGGATA CCCATGTAGC CACTTATAAT AACAATGCAA CGACCGATGT TGTCCACCTT ACTCCGTTGC AAAAGCTCTG GTTAACCATT TACAATTTAG AATCATATCT GGTATTTCCC GTCGCTCTTA GCGATGGATC ATGGGTTCAC TACACTTTTT ATAGTCGTCG GCGGGAAATG TATACGCAAA GCCACTTAGC CATGCTAACC GGTTTTATAA GCAGTTTGAC TAAGGCTACT GAAAAATTAG TTCAGTCCGA CCTATCTTCC ACATACACGA CACGACTATC GGTTGATAGA AAGCATGATC GCGCCCAAGA TAGTCAAGGC TCTGTTCCGA AATTCAAAGG CATTATCGGG AATCATCCGC TTTTACTGGC CGCCTTAGAC CTTGTAACGC AGGTGGCACC TTATAATACA TCCGTGCTTA TACTTGGGGA AAGCGGTACT GGAAAAGAAA GCATCGCACA GGCCATTCAC TCCCTCTCTG TACGGAAAAC CGGGCCGTTC ATCAAAGTAA ATTGTGCGGC TATTCCGGCG GCACTGATCG AATCTGAGCT GTTTGGCCAT GAGAAAGGCG CATTTACCGG CGCCATTGAA AAGAGGAAAG GAAAATTTGA GCAGTCTCAT GAAGGAACGC TGTTTTTAGA CGAGATTGGC GAAATGCCAT TGGACATGCA AGTGCGGCTG TTGCGGGTTT TACAGGAAAA GGAAATTGAC CCAGTAGGCG GCAAATCGCC CAAGAAAGTC GATGTTCGTG TTGTAGCCGC TACGAACCGA AATCTGGAAC GTGAAGTGGC TGAAGGCCGG TTCAGGCTTG ATCTGTATTA TCGCCTAAAC GTTTTTCCAA TAACCTTACC ACCCCTTCGC GAACGAAAAA GTGATATACA GGCACTATCA GTTTATGTTG CCAACCGGTT TTGTAAAGAG TTCAGCAAGG ATTTCAACGG CATCTCGGCA GGCATGATGG ATGAATTAGA GGGGTATACC TGGCCGGGAA ATATTCGTGA ACTCGAGAAC GTGCTGGAGC GGTCGGTGAT CCTGAATGAT GGTCAATCTG AACTGGAATT AAAGCAAAGC CTCTTGGGCA CAACTGACAA GGTACCCAGC AAGGTAGCGA TCGAAACCCT TGGGGATGTT AGGCGCATTC AGCGAGAGAC AGAAAGGGAG TATCTTATTT CTGTTCTCAA AAACACGAAA GGCCTCATCC GGGGGGCCAA TGGGGCCGCC GAATTACTAC ATATAAAGCC GACAACCCTG GAAGCCAGAC TCGCTAAGTT GGGCATTCAG CGAGAGGATT TAGGCATCGG ATAG
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Protein sequence | MSTRILIVED EFVVANSLRI LLRQAGYHVS GIATSAEEAY AILQKDKPHL VLLDIRLNGS ESGIDLARKL KAEHIAFVYL SANSSQKVLE EAKKTEPYGF LVKPFREKDL LVALDIALYL HKNRLESKLR QEALLERQLL EISQNALNAK QTFLQIARAI RTVIPFDLIV CGTRPFTASR FGDYGYLRVG LDDYQFIGRD ELLTISGLKS DALSNIIENS HTDTHVATYN NNATTDVVHL TPLQKLWLTI YNLESYLVFP VALSDGSWVH YTFYSRRREM YTQSHLAMLT GFISSLTKAT EKLVQSDLSS TYTTRLSVDR KHDRAQDSQG SVPKFKGIIG NHPLLLAALD LVTQVAPYNT SVLILGESGT GKESIAQAIH SLSVRKTGPF IKVNCAAIPA ALIESELFGH EKGAFTGAIE KRKGKFEQSH EGTLFLDEIG EMPLDMQVRL LRVLQEKEID PVGGKSPKKV DVRVVAATNR NLEREVAEGR FRLDLYYRLN VFPITLPPLR ERKSDIQALS VYVANRFCKE FSKDFNGISA GMMDELEGYT WPGNIRELEN VLERSVILND GQSELELKQS LLGTTDKVPS KVAIETLGDV RRIQRETERE YLISVLKNTK GLIRGANGAA ELLHIKPTTL EARLAKLGIQ REDLGIG
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