Gene Cpin_6068 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCpin_6068 
Symbol 
ID8362250 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChitinophaga pinensis DSM 2588 
KingdomBacteria 
Replicon accessionNC_013132 
Strand
Start bp7666185 
End bp7666931 
Gene Length747 bp 
Protein Length248 aa 
Translation table11 
GC content40% 
IMG OID644968202 
Productresponse regulator receiver protein 
Protein accessionYP_003125681 
Protein GI256425028 
COG category[T] Signal transduction mechanisms 
COG ID[COG2204] Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones30 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones43 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGAAAAGA AAAAGATACT TATTGTTGAA GATGAAATTA TTGTAAGTAC CAGTATGACG 
CTTACACTTA GCAGGAAGAA TTACGATTGT ATGGTCGTTA CATCCGGGGA GCAGGCTATT
AATGCACTGG ATACTTATGA GCCGGATCTT ATATTAATGG ATATCGGACT TGATGGTAAA
ATTGATGGAA TCTCTGCGGC CAGTATTATC CGCAAGCAAT ATGACAGTCC CATTATTTTT
GTAACGGAGC AGCAGGATAC CAATGTATTT CAACATGCGA TGATCGCTTT CCCACAGAAT
TATCTCAGCA AGCCATATAC TGATATAGCG CTCTTACAGG CTGTTGAGAT GGCCATTCAT
CAACCTGTTG CAGCGGGTAA TCCGGCTACT CCTAAGCCAA TGGACGACCG GGTTTCGGAT
GGTATTTTTA TTTACCTGCA TAATCAGTAT GTGAAGGTAT TATTTGCCGA TATTCTATAT
CTGAAAGCAG ACGGAATGTC TACGGTTATG TATTGTGCTA TGAATAAAGA GTATACTATC
TCGCTTCCGT CGAATAAGGT GGTTGCTCAA CTTGCCTGTC CGTGGATCGT ACAAACCAAC
CGGTCATTTT ATGTCAATAT TCATCGTATT GATAGTATAA GACATGATAC GCTTATTGTG
AACAGGAATG AAGTGCCGAT GGGTAAAAAG TACAAGTTTA ATGTGTTGAG TCGCCTTAAG
AAAATTACGC AAGGTAAACA GGAATAG
 
Protein sequence
MEKKKILIVE DEIIVSTSMT LTLSRKNYDC MVVTSGEQAI NALDTYEPDL ILMDIGLDGK 
IDGISAASII RKQYDSPIIF VTEQQDTNVF QHAMIAFPQN YLSKPYTDIA LLQAVEMAIH
QPVAAGNPAT PKPMDDRVSD GIFIYLHNQY VKVLFADILY LKADGMSTVM YCAMNKEYTI
SLPSNKVVAQ LACPWIVQTN RSFYVNIHRI DSIRHDTLIV NRNEVPMGKK YKFNVLSRLK
KITQGKQE