More than 300 homologs were found in PanDaTox collection
for query gene Krad_1583 on replicon NC_009664
Organism: Kineococcus radiotolerans SRS30216



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Replicon accession
Locus tag
Product
% identity
Alignment on query gene
Alignment on homolog gene
Length
Bit score

E-value
Organism name
Kingdom
Plasmid clonability
Plasmid unclonability p-value
Fosmid clonability
Fosmid unclonability p-value
Coverage Plot
PanDaTox homologs
Experimental validation
NC_009664  Krad_1583  two component transcriptional regulator, LuxR family  100 
 
 		 200 aa  393  1e-109  Kineococcus radiotolerans SRS30216  Bacteria  decreased coverage  0.00238178  normal  0.469918 
 
 
-
 
NC_008578  Acel_1390  two component LuxR family transcriptional regulator  50.22 
 
 		 225 aa  179  2e-44  Acidothermus cellulolyticus 11B  Bacteria  normal  1  normal  1 
 
 
-
 
NC_013093  Amir_1549  two component transcriptional regulator, LuxR family  49.09 
 
 		 238 aa  172  2.9999999999999996e-42  Actinosynnema mirum DSM 43827  Bacteria  normal  0.196807  n/a   
 
 
-
 
NC_013131  Caci_6781  two component transcriptional regulator, LuxR family  45.92 
 
 		 232 aa  162  3e-39  Catenulispora acidiphila DSM 44928  Bacteria  normal  1  normal  0.516576 
 
 
-
 
NC_013235  Namu_3546  two component transcriptional regulator, LuxR family  44.44 
 
 		 229 aa  110  1.0000000000000001e-23  Nakamurella multipartita DSM 44233  Bacteria  decreased coverage  0.00000843196  hitchhiker  0.00749158 
 
 
-
 
NC_014151  Cfla_1727  transcriptional regulator, LuxR family  46.51 
 
 		 137 aa  92.4  4e-18  Cellulomonas flavigena DSM 20109  Bacteria  normal  1  normal  0.0510322 
 
 
-
 
NC_013124  Afer_1981  two component transcriptional regulator, LuxR family  34.8 
 
 		 222 aa  82.8  0.000000000000003  Acidimicrobium ferrooxidans DSM 10331  Bacteria  normal  1  n/a   
 
 
-
 
NC_013235  Namu_3769  transcriptional regulator, LuxR family  37.81 
 
 		 205 aa  78.6  0.00000000000006  Nakamurella multipartita DSM 44233  Bacteria  normal  0.0158689  normal  0.601222 
 
 
-
 
NC_007974  Rmet_5165  two component LuxR family transcriptional regulator  31.55 
 
 		 231 aa  70.1  0.00000000002  Cupriavidus metallidurans CH34  Bacteria  normal  1  normal  0.162111 
 
 
-
 
NC_008025  Dgeo_1626  two component LuxR family transcriptional regulator  32.97 
 
 		 194 aa  69.7  0.00000000002  Deinococcus geothermalis DSM 11300  Bacteria  normal  1  normal  0.947018 
 
 
-
 
NC_007947  Mfla_0447  two component LuxR family transcriptional regulator  28.77 
 
 		 244 aa  69.7  0.00000000003  Methylobacillus flagellatus KT  Bacteria  normal  0.013193  normal  0.6128 
 
 
-
 
NC_010002  Daci_5322  two component LuxR family transcriptional regulator  34.27 
 
 		 220 aa  69.3  0.00000000003  Delftia acidovorans SPH-1  Bacteria  normal  1  normal  0.929677 
 
 
-
 
NC_010623  Bphy_4331  two component LuxR family transcriptional regulator  31.07 
 
 		 212 aa  68.9  0.00000000005  Burkholderia phymatum STM815  Bacteria  normal  0.748519  normal  1 
 
 
-
 
NC_009972  Haur_1563  two component LuxR family transcriptional regulator  51.61 
 
 		 257 aa  66.6  0.0000000003  Herpetosiphon aurantiacus ATCC 23779  Bacteria  normal  0.781509  n/a   
 
 
-
 
NC_011831  Cagg_2359  two component transcriptional regulator, LuxR family  53.23 
 
 		 247 aa  65.5  0.0000000005  Chloroflexus aggregans DSM 9485  Bacteria  normal  0.0990205  decreased coverage  0.00133027 
 
 
-
 
NC_012791  Vapar_3592  two component transcriptional regulator, LuxR family  28.9 
 
 		 235 aa  65.5  0.0000000005  Variovorax paradoxus S110  Bacteria  normal  0.356082  n/a   
 
 
-
 
NC_013757  Gobs_4001  two component transcriptional regulator, LuxR family  33.93 
 
 		 236 aa  65.5  0.0000000005  Geodermatophilus obscurus DSM 43160  Bacteria  normal  1  n/a   
 
 
-
 
NC_011891  A2cp1_1966  two component transcriptional regulator, LuxR family  29.52 
 
 		 218 aa  65.5  0.0000000006  Anaeromyxobacter dehalogenans 2CP-1  Bacteria  normal  1  n/a   
 
 
-
 
NC_011145  AnaeK_1881  two component transcriptional regulator, LuxR family  29.52 
 
 		 218 aa  65.5  0.0000000006  Anaeromyxobacter sp. K  Bacteria  normal  0.0160211  n/a   
 
 
-
 
NC_010718  Nther_0648  two component transcriptional regulator, LuxR family  29.19 
 
 		 215 aa  65.1  0.0000000007  Natranaerobius thermophilus JW/NM-WN-LF  Bacteria  normal  1  normal  1 
 
 
-
 
NC_007760  Adeh_1997  two component LuxR family transcriptional regulator  29.05 
 
 		 218 aa  64.7  0.0000000008  Anaeromyxobacter dehalogenans 2CP-C  Bacteria  normal  1  n/a   
 
 
-
 
NC_013411  GYMC61_3240  two component transcriptional regulator, LuxR family  28.37 
 
 		 224 aa  64.7  0.0000000009  Geobacillus sp. Y412MC61  Bacteria  n/a    n/a   
 
 
-
 
NC_013739  Cwoe_5387  two component transcriptional regulator, LuxR family  31.19 
 
 		 215 aa  64.3  0.000000001  Conexibacter woesei DSM 14684  Bacteria  normal  1  normal  1 
 
 
-
 
NC_007404  Tbd_2786  two component LuxR family transcriptional regulator  30.12 
 
 		 210 aa  63.9  0.000000001  Thiobacillus denitrificans ATCC 25259  Bacteria  normal  0.0443035  normal  0.922606 
 
 
-
 
NC_013124  Afer_1446  two component transcriptional regulator, LuxR family  28.9 
 
 		 223 aa  64.7  0.000000001  Acidimicrobium ferrooxidans DSM 10331  Bacteria  normal  1  n/a   
 
 
-
 
NC_011830  Dhaf_1230  two component transcriptional regulator, LuxR family  26.71 
 
 		 215 aa  63.5  0.000000002  Desulfitobacterium hafniense DCB-2  Bacteria  normal  1  n/a   
 
 
-
 
NC_009921  Franean1_6596  two component LuxR family transcriptional regulator  31.22 
 
 		 249 aa  62  0.000000005  Frankia sp. EAN1pec  Bacteria  normal  1  normal  1 
 
 
-
 
NC_008009  Acid345_3748  two component LuxR family transcriptional regulator  28 
 
 		 211 aa  62.4  0.000000005  Candidatus Koribacter versatilis Ellin345  Bacteria  normal  0.107866  normal  1 
 
 
-
 
NC_012669  Bcav_0717  two component transcriptional regulator, LuxR family  31.07 
 
 		 209 aa  62  0.000000005  Beutenbergia cavernae DSM 12333  Bacteria  normal  0.854815  normal  0.189113 
 
 
-
 
NC_014151  Cfla_2586  two component transcriptional regulator, LuxR family  54.84 
 
 		 223 aa  62  0.000000006  Cellulomonas flavigena DSM 20109  Bacteria  normal  0.646343  normal  1 
 
 
-
 
NC_014151  Cfla_2563  two component transcriptional regulator, LuxR family  30.77 
 
 		 229 aa  61.6  0.000000007  Cellulomonas flavigena DSM 20109  Bacteria  normal  0.127898  normal  1 
 
 
-
 
NC_009972  Haur_1600  two component LuxR family transcriptional regulator  32.05 
 
 		 207 aa  61.6  0.000000008  Herpetosiphon aurantiacus ATCC 23779  Bacteria  normal  1  n/a   
 
 
-
 
NC_009921  Franean1_6933  two component LuxR family transcriptional regulator  31.08 
 
 		 244 aa  61.6  0.000000008  Frankia sp. EAN1pec  Bacteria  normal  1  normal  0.322421 
 
 
-
 
NC_009921  Franean1_4062  two component LuxR family transcriptional regulator  31.08 
 
 		 216 aa  61.6  0.000000008  Frankia sp. EAN1pec  Bacteria  normal  0.0448793  normal  0.300284 
 
 
-
 
NC_010524  Lcho_0242  two component LuxR family transcriptional regulator  32.3 
 
 		 211 aa  61.2  0.000000009  Leptothrix cholodnii SP-6  Bacteria  n/a    decreased coverage  0.000159114 
 
 
-
 
NC_009253  Dred_1864  two component LuxR family transcriptional regulator  28.65 
 
 		 205 aa  61.2  0.000000009  Desulfotomaculum reducens MI-1  Bacteria  normal  1  n/a   
 
 
-
 
NC_013235  Namu_1210  two component transcriptional regulator, LuxR family  36.13 
 
 		 198 aa  61.2  0.000000009  Nakamurella multipartita DSM 44233  Bacteria  normal  0.292938  normal  1 
 
 
-
 
NC_005945  BAS2109  LuxR family DNA-binding response regulator  27.38 
 
 		 209 aa  60.5  0.00000001  Bacillus anthracis str. Sterne  Bacteria  normal  1  n/a   
 
 
-
 
NC_005957  BT9727_2048  response regulator  27.38 
 
 		 209 aa  60.5  0.00000001  Bacillus thuringiensis serovar konkukian str. 97-27  Bacteria  normal  0.102554  n/a   
 
 
-
 
NC_006274  BCZK2046  response regulator  27.38 
 
 		 209 aa  60.5  0.00000001  Bacillus cereus E33L  Bacteria  normal  1  n/a   
 
 
-
 
NC_013510  Tcur_0154  two component transcriptional regulator, LuxR family  31.9 
 
 		 244 aa  60.8  0.00000001  Thermomonospora curvata DSM 43183  Bacteria  normal  1  n/a   
 
 
-
 
NC_007530  GBAA_2265  LuxR family DNA-binding response regulator  27.38 
 
 		 209 aa  60.5  0.00000001  Bacillus anthracis str. 'Ames Ancestor'  Bacteria  normal  0.201191  n/a   
 
 
-
 
NC_007777  Francci3_3253  two component LuxR family transcriptional regulator  29.68 
 
 		 213 aa  61.2  0.00000001  Frankia sp. CcI3  Bacteria  normal  1  normal  1 
 
 
-
 
NC_013552  DhcVS_1132  DNA-binding response regulator, LuxR family  35.9 
 
 		 225 aa  60.8  0.00000001  Dehalococcoides sp. VS  Bacteria  normal  0.893152  n/a   
 
 
-
 
NC_008578  Acel_0365  two component LuxR family transcriptional regulator  33.76 
 
 		 199 aa  60.8  0.00000001  Acidothermus cellulolyticus 11B  Bacteria  normal  0.210231  normal  0.243335 
 
 
-
 
NC_008726  Mvan_2836  two component LuxR family transcriptional regulator  31.82 
 
 		 207 aa  61.2  0.00000001  Mycobacterium vanbaalenii PYR-1  Bacteria  normal  0.644859  normal  1 
 
 
-
 
NC_013124  Afer_0180  two component transcriptional regulator, LuxR family  33.75 
 
 		 216 aa  60.8  0.00000001  Acidimicrobium ferrooxidans DSM 10331  Bacteria  normal  0.245465  n/a   
 
 
-
 
NC_010676  Bphyt_6883  two component transcriptional regulator, LuxR family  30.69 
 
 		 213 aa  61.2  0.00000001  Burkholderia phytofirmans PsJN  Bacteria  normal  0.239531  normal  0.170628 
 
 
-
 
NC_011773  BCAH820_2290  DNA-binding response regulator, LuxR family  27.38 
 
 		 209 aa  60.5  0.00000001  Bacillus cereus AH820  Bacteria  n/a    hitchhiker  0.00000000000000736213 
 
 
-
 
NC_011071  Smal_2340  two component transcriptional regulator, LuxR family  50.79 
 
 		 217 aa  60.1  0.00000002  Stenotrophomonas maltophilia R551-3  Bacteria  normal  0.273151  normal  1 
 
 
-
 
NC_013521  Sked_32990  response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain  29.45 
 
 		 217 aa  60.5  0.00000002  Sanguibacter keddieii DSM 10542  Bacteria  normal  1  normal  0.227707 
 
 
-
 
NC_007952  Bxe_B2928  two component LuxR family transcriptional regulator  31.19 
 
 		 213 aa  60.1  0.00000002  Burkholderia xenovorans LB400  Bacteria  normal  1  normal  1 
 
 
-
 
NC_008146  Mmcs_0590  two component LuxR family transcriptional regulator  39.6 
 
 		 215 aa  60.1  0.00000002  Mycobacterium sp. MCS  Bacteria  normal  1  n/a   
 
 
-
 
NC_008148  Rxyl_0882  LuxR family transcriptional regulator  54.55 
 
 		 253 aa  60.1  0.00000002  Rubrobacter xylanophilus DSM 9941  Bacteria  normal  1  n/a   
 
 
-
 
NC_009921  Franean1_0533  two component LuxR family transcriptional regulator  46.88 
 
 		 219 aa  60.5  0.00000002  Frankia sp. EAN1pec  Bacteria  normal  0.405575  normal  1 
 
 
-
 
NC_008705  Mkms_0603  two component LuxR family transcriptional regulator  39.6 
 
 		 215 aa  60.1  0.00000002  Mycobacterium sp. KMS  Bacteria  normal  1  normal  1 
 
 
-
 
NC_009077  Mjls_0581  two component LuxR family transcriptional regulator  39.6 
 
 		 215 aa  60.1  0.00000002  Mycobacterium sp. JLS  Bacteria  normal  1  normal  1 
 
 
-
 
NC_009511  Swit_0804  two component LuxR family transcriptional regulator  28.23 
 
 		 229 aa  59.7  0.00000002  Sphingomonas wittichii RW1  Bacteria  normal  1  normal  1 
 
 
-
 
NC_011831  Cagg_0020  two component transcriptional regulator, LuxR family  39.78 
 
 		 229 aa  59.7  0.00000003  Chloroflexus aggregans DSM 9485  Bacteria  normal  1  normal  1 
 
 
-
 
NC_012793  GWCH70_3043  two component transcriptional regulator, LuxR family  28.32 
 
 		 225 aa  59.7  0.00000003  Geobacillus sp. WCH70  Bacteria  decreased coverage  0.0000000652561  n/a   
 
 
-
 
NC_008009  Acid345_2443  two component LuxR family transcriptional regulator  30.92 
 
 		 215 aa  59.3  0.00000003  Candidatus Koribacter versatilis Ellin345  Bacteria  normal  1  normal  1 
 
 
-
 
NC_009767  Rcas_2258  two component LuxR family transcriptional regulator  48.39 
 
 		 254 aa  59.3  0.00000003  Roseiflexus castenholzii DSM 13941  Bacteria  normal  1  hitchhiker  0.00245701 
 
 
-
 
NC_012669  Bcav_2482  two component transcriptional regulator, LuxR family  33.56 
 
 		 208 aa  59.7  0.00000003  Beutenbergia cavernae DSM 12333  Bacteria  normal  0.0211915  normal  0.642006 
 
 
-
 
NC_008148  Rxyl_0160  two component LuxR family transcriptional regulator  29.72 
 
 		 212 aa  59.3  0.00000003  Rubrobacter xylanophilus DSM 9941  Bacteria  normal  1  n/a   
 
 
-
 
NC_010571  Oter_3357  two component LuxR family transcriptional regulator  30.81 
 
 		 238 aa  59.7  0.00000003  Opitutus terrae PB90-1  Bacteria  normal  0.1255  normal  1 
 
 
-
 
NC_013510  Tcur_1253  two component transcriptional regulator, LuxR family  36.87 
 
 		 203 aa  59.3  0.00000003  Thermomonospora curvata DSM 43183  Bacteria  normal  1  n/a   
 
 
-
 
NC_008752  Aave_1121  two component LuxR family transcriptional regulator  34.46 
 
 		 222 aa  59.3  0.00000003  Acidovorax citrulli AAC00-1  Bacteria  normal  0.864132  normal  0.872256 
 
 
-
 
NC_013131  Caci_1011  two component transcriptional regulator, LuxR family  31.48 
 
 		 203 aa  59.7  0.00000003  Catenulispora acidiphila DSM 44928  Bacteria  normal  1  normal  0.109267 
 
 
-
 
NC_010571  Oter_3186  two component LuxR family transcriptional regulator  27.54 
 
 		 215 aa  59.7  0.00000003  Opitutus terrae PB90-1  Bacteria  normal  0.0678517  normal  1 
 
 
-
 
NC_009485  BBta_0530  two component LuxR family transcriptional regulator  29.8 
 
 		 211 aa  59.3  0.00000003  Bradyrhizobium sp. BTAi1  Bacteria  normal  1  normal  1 
 
 
-
 
NC_009523  RoseRS_1633  two component LuxR family transcriptional regulator  48.39 
 
 		 254 aa  59.7  0.00000003  Roseiflexus sp. RS-1  Bacteria  normal  1  normal  1 
 
 
-
 
NC_009719  Plav_1134  two component LuxR family transcriptional regulator  46.03 
 
 		 213 aa  59.3  0.00000004  Parvibaculum lavamentivorans DS-1  Bacteria  normal  1  normal  1 
 
 
-
 
NC_007947  Mfla_1927  LuxR family transcriptional regulator  36.84 
 
 		 257 aa  59.3  0.00000004  Methylobacillus flagellatus KT  Bacteria  normal  1  normal  1 
 
 
-
 
NC_010571  Oter_1284  two component LuxR family transcriptional regulator  30.67 
 
 		 209 aa  59.3  0.00000004  Opitutus terrae PB90-1  Bacteria  normal  0.479266  normal  1 
 
 
-
 
NC_010571  Oter_3372  two component LuxR family transcriptional regulator  45.07 
 
 		 212 aa  59.3  0.00000004  Opitutus terrae PB90-1  Bacteria  normal  1  normal  0.383896 
 
 
-
 
NC_010717  PXO_06170  response regulator  29.44 
 
 		 210 aa  58.9  0.00000005  Xanthomonas oryzae pv. oryzae PXO99A  Bacteria  normal  0.624626  n/a   
 
 
-
 
NC_010717  PXO_00996  response regulator  29.44 
 
 		 210 aa  58.9  0.00000005  Xanthomonas oryzae pv. oryzae PXO99A  Bacteria  normal  0.0885199  n/a   
 
 
-
 
NC_002936  DET1350  LuxR family DNA-binding response regulator  28.48 
 
 		 225 aa  58.5  0.00000006  Dehalococcoides ethenogenes 195  Bacteria  decreased coverage  0.00111586  n/a   
 
 
-
 
NC_009656  PSPA7_2885  putative transcriptional regulator  31.28 
 
 		 213 aa  58.5  0.00000006  Pseudomonas aeruginosa PA7  Bacteria  normal  0.115145  n/a   
 
 
-
 
NC_013757  Gobs_4449  two component transcriptional regulator, LuxR family  49.21 
 
 		 253 aa  58.2  0.00000007  Geodermatophilus obscurus DSM 43160  Bacteria  normal  1  n/a   
 
 
-
 
NC_010338  Caul_0621  two component LuxR family transcriptional regulator  35.29 
 
 		 212 aa  58.2  0.00000007  Caulobacter sp. K31  Bacteria  normal  1  normal  0.881689 
 
 
-
 
NC_009943  Dole_0029  two component LuxR family transcriptional regulator  28.16 
 
 		 214 aa  58.2  0.00000007  Desulfococcus oleovorans Hxd3  Bacteria  normal  0.317943  n/a   
 
 
-
 
NC_014165  Tbis_3390  LuxR family two component transcriptional regulator  36.63 
 
 		 228 aa  58.2  0.00000008  Thermobispora bispora DSM 43833  Bacteria  normal  0.269937  normal  1 
 
 
-
 
NC_014210  Ndas_0346  two component transcriptional regulator, LuxR family  30.43 
 
 		 210 aa  58.2  0.00000008  Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111  Bacteria  normal  0.0205277  normal  0.823307 
 
 
-
 
NC_013521  Sked_08490  response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain  40.48 
 
 		 236 aa  58.2  0.00000009  Sanguibacter keddieii DSM 10542  Bacteria  normal  0.199706  normal  0.526513 
 
 
-
 
NC_008010  Dgeo_2846  two component LuxR family transcriptional regulator  32.69 
 
 		 209 aa  57.8  0.00000009  Deinococcus geothermalis DSM 11300  Bacteria  normal  1  n/a   
 
 
-
 
NC_013521  Sked_29940  two component transcriptional regulator, LuxR family  33.33 
 
 		 234 aa  58.2  0.00000009  Sanguibacter keddieii DSM 10542  Bacteria  normal  1  normal  0.683883 
 
 
-
 
NC_013947  Snas_4575  two component transcriptional regulator, LuxR family  42.03 
 
 		 224 aa  57.4  0.0000001  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  0.703378  normal  0.112036 
 
 
-
 
NC_009338  Mflv_3579  two component LuxR family transcriptional regulator  30.05 
 
 		 217 aa  57.8  0.0000001  Mycobacterium gilvum PYR-GCK  Bacteria  normal  0.393396  normal  0.0540104 
 
 
-
 
NC_012850  Rleg_1545  two component transcriptional regulator, LuxR family  29.89 
 
 		 218 aa  57.8  0.0000001  Rhizobium leguminosarum bv. trifolii WSM1325  Bacteria  normal  0.0982964  normal  0.0521608 
 
 
-
 
NC_013093  Amir_6962  two component transcriptional regulator, LuxR family  29.61 
 
 		 234 aa  57.4  0.0000001  Actinosynnema mirum DSM 43827  Bacteria  normal  1  n/a   
 
 
-
 
NC_012669  Bcav_2822  two component transcriptional regulator, LuxR family  41.67 
 
 		 231 aa  57  0.0000002  Beutenbergia cavernae DSM 12333  Bacteria  normal  0.311075  normal  1 
 
 
-
 
NC_007778  RPB_3850  two component LuxR family transcriptional regulator  28.93 
 
 		 209 aa  56.6  0.0000002  Rhodopseudomonas palustris HaA2  Bacteria  normal  1  normal  1 
 
 
-
 
NC_009767  Rcas_4428  two component LuxR family transcriptional regulator  45.16 
 
 		 231 aa  57  0.0000002  Roseiflexus castenholzii DSM 13941  Bacteria  normal  1  normal  1 
 
 
-
 
NC_013595  Sros_0277  response regulator receiver protein  33.73 
 
 		 214 aa  57  0.0000002  Streptosporangium roseum DSM 43021  Bacteria  normal  1  normal  1 
 
 
-
 
NC_009953  Sare_4229  two component LuxR family transcriptional regulator  49.18 
 
 		 270 aa  56.6  0.0000002  Salinispora arenicola CNS-205  Bacteria  normal  1  normal  0.104641 
 
 
-
 
NC_010717  PXO_02404  transcriptional regulator LuxR/uhpA family  28.64 
 
 		 218 aa  56.6  0.0000002  Xanthomonas oryzae pv. oryzae PXO99A  Bacteria  normal  1  n/a   
 
 
-
 
NC_012669  Bcav_1611  two component transcriptional regulator, LuxR family  30.34 
 
 		 208 aa  57  0.0000002  Beutenbergia cavernae DSM 12333  Bacteria  normal  0.548364  normal  1 
 
 
-
 
NC_013525  Tter_1132  two component transcriptional regulator, LuxR family  25.41 
 
 		 214 aa  56.6  0.0000002  Thermobaculum terrenum ATCC BAA-798  Bacteria  n/a    n/a   
 
 
-
 
NC_010501  PputW619_2781  two component LuxR family transcriptional regulator  29.14 
 
 		 204 aa  57  0.0000002  Pseudomonas putida W619  Bacteria  normal  1  normal  1 
 
 
-
 
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