| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bphyt_6883 |
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| Symbol | |
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| ID | 6278733 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia phytofirmans PsJN |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010676 |
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| Strand | - |
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| Start bp | 3242965 |
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| End bp | 3243606 |
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| Gene Length | 642 bp |
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| Protein Length | 213 aa |
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| Translation table | 11 |
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| GC content | 58% |
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| IMG OID | 642617910 |
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| Product | two component transcriptional regulator, LuxR family |
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| Protein accession | YP_001890546 |
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| Protein GI | 187921514 |
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| COG category | [K] Transcription
[T] Signal transduction mechanisms |
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| COG ID | [COG2197] Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 0.239531 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 33 |
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| Fosmid unclonability p-value | 0.170628 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCAACTA TTCTGGTTAT CGACGACCAT CCGGCGTTCC GTATGGTCAT CAAAATGCAG
CTCGTGCAAT TGCTTGGCGT AGAAGAAGTG ATCGAGGCCG ATAACGGCCA GACTGCTGTC
GAGTTGGCCC GGATACACGC TCCAGAGCTG GCCATACTTG ACCTCGATAT TCCGCGCATC
AGCGGACTGG ATGTGATTCC CCGGCTCAAG CTCGCTCATC CGCAGATCCG CGTGATGGTG
TTGTCGGGTC ACGACCCGGC TACATTCGCG CCGCGCGCGA TGCGCTCGGG CGTCCACGGT
TTTGTCGGCA AGTCGCAGGA AATGAAGGAG ATCATGCGCG GCGTGGAGGC GGTGATGGCC
GGCTACACAG TGTTCCCGAT GGCGGTCGGC GGCGCAGGCA TGACGTTCGC CGACGGAGTG
GGAGGGGAGG AGGCCAGGAT CGGCCTGCTG TCGGATAAAG AACTCGTGAT TTTGCAGATG
CTGTCGAAGG GCATGTCGAA TAAGGCAATT GGCGATGCCT TGTTTATCAG TAACAAAACG
GTCAGCAGCC ATAAGACACG CATCATGCAC AAGCTTGGCG TCAAATCGCT GGTTGAGCTG
ATCGATCTGG CGCGACGCTG CCGGATTGCG TCCACGCAAT GA
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| Protein sequence | MSTILVIDDH PAFRMVIKMQ LVQLLGVEEV IEADNGQTAV ELARIHAPEL AILDLDIPRI
SGLDVIPRLK LAHPQIRVMV LSGHDPATFA PRAMRSGVHG FVGKSQEMKE IMRGVEAVMA
GYTVFPMAVG GAGMTFADGV GGEEARIGLL SDKELVILQM LSKGMSNKAI GDALFISNKT
VSSHKTRIMH KLGVKSLVEL IDLARRCRIA STQ
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