| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Afer_0180 |
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| Symbol | |
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| ID | 8322233 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Acidimicrobium ferrooxidans DSM 10331 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013124 |
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| Strand | + |
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| Start bp | 187810 |
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| End bp | 188460 |
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| Gene Length | 651 bp |
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| Protein Length | 216 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 644951327 |
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| Product | two component transcriptional regulator, LuxR family |
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| Protein accession | YP_003108822 |
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| Protein GI | 256370998 |
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| COG category | [K] Transcription
[T] Signal transduction mechanisms |
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| COG ID | [COG2197] Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain |
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| TIGRFAM ID | [TIGR02937] RNA polymerase sigma factor, sigma-70 family |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.245465 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGGCCGTGA CCATCGTGCT CGTCGATGAC CACCAGGTGA TCATCGACGG GGTGCGTGCC
ATGCTTGCGC CCTACGCCGA CCGGGTCACG ATGGTCGGGT CGGCGAAGAC GCGGGCCGAG
CTGTTCGAGG TGCTCGAGAG CGTGCACCCT GATCTCATCG TGACCGATGC GAGGCTCACC
AACGACTCGG GCTTCGAGAT CCTCGAGGAC CTCCAGCGAC GTGGCGTGGC GGTGCCCGTC
GTGTTCTACA GTGCCTATGA CGACGAGGCC TACCTCTTTC GTGCGTTGCG CGCCGGTGCG
CGAGGCTACC TCCTCAAGCA GGCCTCAGGC GAAGAGCTCG TAGGGATGCT CGAGCGGGCC
GCAGGTGGCG AGACGATGAT CGATGCTGCG CTCGCCGGCA GAGTAGCCCT GCTCGCAGCC
CGCTTGCAGT TCGGTGAGTT CTGGCCGGGA GCACACCTCG GACTCACGCA GCGCGAGAGC
GAGATCCTCG ATCTGGTGGT CAAGGGGCTC TCGAATCGAG ACATCGCGCA GCGACTGTTC
CTGGGAGAAG AGACCGTCAA GACGCATCTG TCCTCGATCT ATCGCAAGCT CAAGGTCAAG
GGACGCGCCG AGGCGATCGC GGTTGCCCTG CGCGAAGTGC GGTTCCGATG A
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| Protein sequence | MAVTIVLVDD HQVIIDGVRA MLAPYADRVT MVGSAKTRAE LFEVLESVHP DLIVTDARLT
NDSGFEILED LQRRGVAVPV VFYSAYDDEA YLFRALRAGA RGYLLKQASG EELVGMLERA
AGGETMIDAA LAGRVALLAA RLQFGEFWPG AHLGLTQRES EILDLVVKGL SNRDIAQRLF
LGEETVKTHL SSIYRKLKVK GRAEAIAVAL REVRFR
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