More than 300 homologs were found in PanDaTox collection
for query gene Afer_0180 on replicon NC_013124
Organism: Acidimicrobium ferrooxidans DSM 10331



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_013124  Afer_0180  two component transcriptional regulator, LuxR family  100 
 
 
216 aa  427  1e-119  Acidimicrobium ferrooxidans DSM 10331  Bacteria  normal  0.245465  n/a   
 
 
-
 
NC_013510  Tcur_1651  two component transcriptional regulator, LuxR family  55.61 
 
 
218 aa  230  1e-59  Thermomonospora curvata DSM 43183  Bacteria  hitchhiker  0.000163278  n/a   
 
 
-
 
NC_008146  Mmcs_1056  two component LuxR family transcriptional regulator  56.67 
 
 
219 aa  220  9.999999999999999e-57  Mycobacterium sp. MCS  Bacteria  normal  n/a   
 
 
-
 
NC_008705  Mkms_1072  two component LuxR family transcriptional regulator  56.67 
 
 
219 aa  220  9.999999999999999e-57  Mycobacterium sp. KMS  Bacteria  normal  0.562029  normal  0.0679961 
 
 
-
 
NC_009077  Mjls_1083  two component LuxR family transcriptional regulator  56.67 
 
 
219 aa  220  9.999999999999999e-57  Mycobacterium sp. JLS  Bacteria  normal  0.605869  normal 
 
 
-
 
NC_008726  Mvan_1358  two component LuxR family transcriptional regulator  56.19 
 
 
220 aa  210  2e-53  Mycobacterium vanbaalenii PYR-1  Bacteria  normal  0.110964  normal 
 
 
-
 
NC_009338  Mflv_5014  two component LuxR family transcriptional regulator  50.93 
 
 
209 aa  208  4e-53  Mycobacterium gilvum PYR-GCK  Bacteria  normal  0.103708  normal  0.29037 
 
 
-
 
NC_007777  Francci3_2258  two component LuxR family transcriptional regulator  38.28 
 
 
224 aa  137  1e-31  Frankia sp. CcI3  Bacteria  normal  0.124896  normal  0.0124728 
 
 
-
 
NC_009921  Franean1_1971  two component LuxR family transcriptional regulator  40.67 
 
 
216 aa  136  3.0000000000000003e-31  Frankia sp. EAN1pec  Bacteria  normal  0.356635  normal  0.773651 
 
 
-
 
NC_008148  Rxyl_1550  two component LuxR family transcriptional regulator  37.14 
 
 
220 aa  133  1.9999999999999998e-30  Rubrobacter xylanophilus DSM 9941  Bacteria  normal  n/a   
 
 
-
 
NC_012669  Bcav_3541  two component transcriptional regulator, LuxR family  39.23 
 
 
211 aa  132  6e-30  Beutenbergia cavernae DSM 12333  Bacteria  normal  0.485125  normal  0.513005 
 
 
-
 
NC_009921  Franean1_2449  two component LuxR family transcriptional regulator  38.28 
 
 
211 aa  129  4.0000000000000003e-29  Frankia sp. EAN1pec  Bacteria  normal  normal  0.265588 
 
 
-
 
NC_009921  Franean1_4062  two component LuxR family transcriptional regulator  36.45 
 
 
216 aa  128  5.0000000000000004e-29  Frankia sp. EAN1pec  Bacteria  normal  0.0448793  normal  0.300284 
 
 
-
 
NC_007333  Tfu_2950  LuxR response regulator receiver  35.81 
 
 
221 aa  128  5.0000000000000004e-29  Thermobifida fusca YX  Bacteria  normal  n/a   
 
 
-
 
NC_009921  Franean1_6933  two component LuxR family transcriptional regulator  36.45 
 
 
244 aa  128  5.0000000000000004e-29  Frankia sp. EAN1pec  Bacteria  normal  normal  0.322421 
 
 
-
 
NC_009921  Franean1_4979  two component LuxR family transcriptional regulator  36.19 
 
 
231 aa  128  6e-29  Frankia sp. EAN1pec  Bacteria  normal  0.889239  normal  0.507767 
 
 
-
 
NC_013235  Namu_2003  two component transcriptional regulator, LuxR family  35.65 
 
 
219 aa  127  1.0000000000000001e-28  Nakamurella multipartita DSM 44233  Bacteria  normal  0.183245  hitchhiker  0.00373502 
 
 
-
 
NC_013385  Adeg_1034  two component transcriptional regulator, LuxR family  35.41 
 
 
213 aa  126  2.0000000000000002e-28  Ammonifex degensii KC4  Bacteria  normal  n/a   
 
 
-
 
NC_007777  Francci3_1487  two component LuxR family transcriptional regulator  36.84 
 
 
231 aa  125  3e-28  Frankia sp. CcI3  Bacteria  normal  0.0122618  normal  0.753042 
 
 
-
 
NC_014158  Tpau_4145  two component transcriptional regulator, LuxR family  35.98 
 
 
216 aa  126  3e-28  Tsukamurella paurometabola DSM 20162  Bacteria  normal  n/a   
 
 
-
 
NC_014210  Ndas_4749  two component transcriptional regulator, LuxR family  35.98 
 
 
223 aa  126  3e-28  Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111  Bacteria  normal  normal 
 
 
-
 
NC_013946  Mrub_0806  two component LuxR family transcriptional regulator  35.24 
 
 
216 aa  125  4.0000000000000003e-28  Meiothermus ruber DSM 1279  Bacteria  normal  normal 
 
 
-
 
NC_009012  Cthe_1267  two component LuxR family transcriptional regulator  31.03 
 
 
216 aa  125  4.0000000000000003e-28  Clostridium thermocellum ATCC 27405  Bacteria  normal  n/a   
 
 
-
 
NC_013159  Svir_01100  response regulator containing a CheY-like receiver domain protein and an HTH DNA-binding domain protein  36.36 
 
 
214 aa  125  5e-28  Saccharomonospora viridis DSM 43017  Bacteria  normal  normal 
 
 
-
 
NC_008699  Noca_0992  regulatory protein, LuxR  33.18 
 
 
218 aa  125  7e-28  Nocardioides sp. JS614  Bacteria  normal  0.850793  n/a   
 
 
-
 
NC_009767  Rcas_1142  two component LuxR family transcriptional regulator  35.24 
 
 
222 aa  125  7e-28  Roseiflexus castenholzii DSM 13941  Bacteria  normal  0.661777  normal 
 
 
-
 
NC_009953  Sare_1528  two component LuxR family transcriptional regulator  33.97 
 
 
212 aa  124  8.000000000000001e-28  Salinispora arenicola CNS-205  Bacteria  normal  0.212037  hitchhiker  0.000165031 
 
 
-
 
NC_012669  Bcav_0717  two component transcriptional regulator, LuxR family  39.62 
 
 
209 aa  124  8.000000000000001e-28  Beutenbergia cavernae DSM 12333  Bacteria  normal  0.854815  normal  0.189113 
 
 
-
 
NC_013595  Sros_3331  response regulator receiver protein  38.57 
 
 
227 aa  124  1e-27  Streptosporangium roseum DSM 43021  Bacteria  normal  0.832029  normal  0.250763 
 
 
-
 
NC_013093  Amir_0513  two component transcriptional regulator, LuxR family  40.19 
 
 
209 aa  124  1e-27  Actinosynnema mirum DSM 43827  Bacteria  normal  0.52986  n/a   
 
 
-
 
NC_010717  PXO_04459  two-component system regulatory protein  35.27 
 
 
213 aa  124  2e-27  Xanthomonas oryzae pv. oryzae PXO99A  Bacteria  normal  n/a   
 
 
-
 
NC_008148  Rxyl_0160  two component LuxR family transcriptional regulator  38.76 
 
 
212 aa  123  2e-27  Rubrobacter xylanophilus DSM 9941  Bacteria  normal  n/a   
 
 
-
 
NC_009972  Haur_0983  two component LuxR family transcriptional regulator  35.41 
 
 
213 aa  123  2e-27  Herpetosiphon aurantiacus ATCC 23779  Bacteria  normal  n/a   
 
 
-
 
NC_013525  Tter_0799  two component transcriptional regulator, LuxR family  33.63 
 
 
226 aa  123  2e-27  Thermobaculum terrenum ATCC BAA-798  Bacteria  n/a    n/a   
 
 
-
 
NC_009921  Franean1_5840  two component LuxR family transcriptional regulator  33.96 
 
 
237 aa  122  3e-27  Frankia sp. EAN1pec  Bacteria  normal  0.0206065  normal  0.380036 
 
 
-
 
NC_013093  Amir_6098  two component transcriptional regulator, LuxR family  37.38 
 
 
218 aa  123  3e-27  Actinosynnema mirum DSM 43827  Bacteria  normal  n/a   
 
 
-
 
NC_013947  Snas_2579  two component transcriptional regulator, LuxR family  39.13 
 
 
213 aa  122  3e-27  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  normal  0.0500394 
 
 
-
 
NC_009380  Strop_1577  response regulator receiver  33.49 
 
 
212 aa  122  3e-27  Salinispora tropica CNB-440  Bacteria  normal  normal  0.967001 
 
 
-
 
NC_014165  Tbis_3505  LuxR family two component transcriptional regulator  35.64 
 
 
213 aa  122  4e-27  Thermobispora bispora DSM 43833  Bacteria  normal  0.345096  normal 
 
 
-
 
NC_013525  Tter_0300  two component transcriptional regulator, LuxR family  34.43 
 
 
224 aa  122  4e-27  Thermobaculum terrenum ATCC BAA-798  Bacteria  n/a    n/a   
 
 
-
 
NC_008699  Noca_0945  response regulator receiver  33.33 
 
 
216 aa  122  5e-27  Nocardioides sp. JS614  Bacteria  normal  0.0407172  n/a   
 
 
-
 
NC_014212  Mesil_2510  two component transcriptional regulator, LuxR family  35.38 
 
 
217 aa  121  7e-27  Meiothermus silvanus DSM 9946  Bacteria  normal  normal 
 
 
-
 
NC_007644  Moth_0023  two component LuxR family transcriptional regulator  36.62 
 
 
221 aa  121  8e-27  Moorella thermoacetica ATCC 39073  Bacteria  normal  0.273145  hitchhiker  0.00000136124 
 
 
-
 
NC_009523  RoseRS_3421  two component LuxR family transcriptional regulator  35.71 
 
 
223 aa  120  9.999999999999999e-27  Roseiflexus sp. RS-1  Bacteria  normal  normal  0.0556432 
 
 
-
 
NC_002936  DET1063  LuxR family DNA-binding response regulator  35.07 
 
 
232 aa  120  1.9999999999999998e-26  Dehalococcoides ethenogenes 195  Bacteria  normal  0.815436  n/a   
 
 
-
 
NC_013510  Tcur_0500  two component transcriptional regulator, LuxR family  35.78 
 
 
226 aa  120  1.9999999999999998e-26  Thermomonospora curvata DSM 43183  Bacteria  normal  n/a   
 
 
-
 
NC_007777  Francci3_0765  two component LuxR family transcriptional regulator  33.02 
 
 
237 aa  120  1.9999999999999998e-26  Frankia sp. CcI3  Bacteria  normal  0.272345  normal 
 
 
-
 
NC_008025  Dgeo_0315  two component LuxR family transcriptional regulator  35.24 
 
 
214 aa  120  1.9999999999999998e-26  Deinococcus geothermalis DSM 11300  Bacteria  normal  hitchhiker  0.0084678 
 
 
-
 
NC_008541  Arth_0485  two component LuxR family transcriptional regulator  36.18 
 
 
208 aa  119  1.9999999999999998e-26  Arthrobacter sp. FB24  Bacteria  normal  0.0855535  n/a   
 
 
-
 
NC_009921  Franean1_5512  two component LuxR family transcriptional regulator  33.64 
 
 
250 aa  120  1.9999999999999998e-26  Frankia sp. EAN1pec  Bacteria  normal  normal  0.631776 
 
 
-
 
NC_011831  Cagg_1346  two component transcriptional regulator, LuxR family  33.19 
 
 
236 aa  119  1.9999999999999998e-26  Chloroflexus aggregans DSM 9485  Bacteria  normal  0.361751  hitchhiker  0.00000337078 
 
 
-
 
NC_013235  Namu_4738  two component transcriptional regulator, LuxR family  32.02 
 
 
233 aa  119  3e-26  Nakamurella multipartita DSM 44233  Bacteria  normal  normal 
 
 
-
 
NC_011831  Cagg_2804  two component transcriptional regulator, LuxR family  34.42 
 
 
216 aa  119  3e-26  Chloroflexus aggregans DSM 9485  Bacteria  normal  0.995251  normal  0.311692 
 
 
-
 
NC_007777  Francci3_3253  two component LuxR family transcriptional regulator  32.7 
 
 
213 aa  119  3.9999999999999996e-26  Frankia sp. CcI3  Bacteria  normal  normal 
 
 
-
 
NC_009767  Rcas_3262  two component LuxR family transcriptional regulator  35.55 
 
 
222 aa  119  3.9999999999999996e-26  Roseiflexus castenholzii DSM 13941  Bacteria  normal  normal  0.764026 
 
 
-
 
NC_008541  Arth_2136  two component LuxR family transcriptional regulator  34.48 
 
 
254 aa  118  4.9999999999999996e-26  Arthrobacter sp. FB24  Bacteria  normal  0.0553154  n/a   
 
 
-
 
NC_009523  RoseRS_1984  two component LuxR family transcriptional regulator  35.21 
 
 
220 aa  118  7e-26  Roseiflexus sp. RS-1  Bacteria  normal  0.178457  normal  0.123783 
 
 
-
 
NC_013947  Snas_5788  two component transcriptional regulator, LuxR family  36.14 
 
 
214 aa  118  7.999999999999999e-26  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  normal  0.785726 
 
 
-
 
NC_007333  Tfu_2491  LuxR response regulator receiver  33.49 
 
 
242 aa  118  7.999999999999999e-26  Thermobifida fusca YX  Bacteria  normal  0.470277  n/a   
 
 
-
 
NC_013501  Rmar_1005  two component transcriptional regulator, LuxR family  35.92 
 
 
211 aa  118  7.999999999999999e-26  Rhodothermus marinus DSM 4252  Bacteria  normal  n/a   
 
 
-
 
NC_013510  Tcur_1532  two component transcriptional regulator, LuxR family  34.62 
 
 
220 aa  118  7.999999999999999e-26  Thermomonospora curvata DSM 43183  Bacteria  normal  0.0114765  n/a   
 
 
-
 
NC_007644  Moth_0975  two component LuxR family transcriptional regulator  34.29 
 
 
222 aa  117  9.999999999999999e-26  Moorella thermoacetica ATCC 39073  Bacteria  normal  normal 
 
 
-
 
NC_013595  Sros_1417  response regulator receiver protein  32.71 
 
 
234 aa  117  9.999999999999999e-26  Streptosporangium roseum DSM 43021  Bacteria  normal  normal  0.0224272 
 
 
-
 
NC_009441  Fjoh_4628  two component LuxR family transcriptional regulator  31.9 
 
 
219 aa  117  9.999999999999999e-26  Flavobacterium johnsoniae UW101  Bacteria  normal  n/a   
 
 
-
 
NC_011312  VSAL_I2370  nitrate/nitrite response regulator protein NarP  33.66 
 
 
203 aa  117  1.9999999999999998e-25  Aliivibrio salmonicida LFI1238  Bacteria  normal  n/a   
 
 
-
 
NC_007333  Tfu_3035  LuxR response regulator receiver  36.14 
 
 
223 aa  117  1.9999999999999998e-25  Thermobifida fusca YX  Bacteria  normal  n/a   
 
 
-
 
NC_013510  Tcur_4038  two component transcriptional regulator, LuxR family  33.64 
 
 
253 aa  116  1.9999999999999998e-25  Thermomonospora curvata DSM 43183  Bacteria  normal  n/a   
 
 
-
 
NC_013093  Amir_0097  two component transcriptional regulator, LuxR family  35.05 
 
 
209 aa  116  1.9999999999999998e-25  Actinosynnema mirum DSM 43827  Bacteria  normal  0.142871  n/a   
 
 
-
 
NC_013595  Sros_0553  response regulator receiver protein  35.71 
 
 
213 aa  117  1.9999999999999998e-25  Streptosporangium roseum DSM 43021  Bacteria  normal  0.82888  normal 
 
 
-
 
NC_008578  Acel_1760  two component LuxR family transcriptional regulator  33.18 
 
 
303 aa  117  1.9999999999999998e-25  Acidothermus cellulolyticus 11B  Bacteria  normal  normal  0.887336 
 
 
-
 
NC_009455  DehaBAV1_0632  two component LuxR family transcriptional regulator  32.23 
 
 
224 aa  117  1.9999999999999998e-25  Dehalococcoides sp. BAV1  Bacteria  hitchhiker  0.00385785  n/a   
 
 
-
 
NC_013525  Tter_1109  two component transcriptional regulator, LuxR family  35.55 
 
 
218 aa  116  1.9999999999999998e-25  Thermobaculum terrenum ATCC BAA-798  Bacteria  n/a    n/a   
 
 
-
 
NC_013595  Sros_0827  response regulator receiver protein  36.76 
 
 
217 aa  116  3e-25  Streptosporangium roseum DSM 43021  Bacteria  normal  normal 
 
 
-
 
NC_011772  BCG9842_B5417  DNA-binding response regulator  32.08 
 
 
215 aa  116  3e-25  Bacillus cereus G9842  Bacteria  normal  normal 
 
 
-
 
NC_007777  Francci3_1039  two component LuxR family transcriptional regulator  33.49 
 
 
238 aa  116  3e-25  Frankia sp. CcI3  Bacteria  normal  normal  0.135118 
 
 
-
 
NC_013595  Sros_0074  response regulator receiver protein  37.8 
 
 
207 aa  116  3e-25  Streptosporangium roseum DSM 43021  Bacteria  normal  normal 
 
 
-
 
NC_009253  Dred_2108  two component LuxR family transcriptional regulator  29.38 
 
 
218 aa  116  3e-25  Desulfotomaculum reducens MI-1  Bacteria  normal  n/a   
 
 
-
 
NC_011899  Hore_19700  two component transcriptional regulator, LuxR family  32.21 
 
 
209 aa  116  3e-25  Halothermothrix orenii H 168  Bacteria  normal  n/a   
 
 
-
 
NC_013739  Cwoe_0615  two component transcriptional regulator, LuxR family  36.5 
 
 
216 aa  115  3.9999999999999997e-25  Conexibacter woesei DSM 14684  Bacteria  normal  normal 
 
 
-
 
NC_008825  Mpe_A1026  response regulator protein  33.96 
 
 
217 aa  115  3.9999999999999997e-25  Methylibium petroleiphilum PM1  Bacteria  normal  normal 
 
 
-
 
NC_009455  DehaBAV1_0409  two component LuxR family transcriptional regulator  33.33 
 
 
232 aa  115  5e-25  Dehalococcoides sp. BAV1  Bacteria  normal  0.135269  n/a   
 
 
-
 
NC_013093  Amir_4433  two component transcriptional regulator, LuxR family  37.02 
 
 
215 aa  115  5e-25  Actinosynnema mirum DSM 43827  Bacteria  normal  n/a   
 
 
-
 
NC_011071  Smal_1099  two component transcriptional regulator, LuxR family  34.3 
 
 
213 aa  115  6e-25  Stenotrophomonas maltophilia R551-3  Bacteria  normal  normal 
 
 
-
 
NC_013552  DhcVS_374  DNA-binding response regulator, LuxR family  33.8 
 
 
232 aa  115  6e-25  Dehalococcoides sp. VS  Bacteria  hitchhiker  0.0000120759  n/a   
 
 
-
 
NC_012793  GWCH70_3043  two component transcriptional regulator, LuxR family  33.03 
 
 
225 aa  115  6e-25  Geobacillus sp. WCH70  Bacteria  decreased coverage  0.0000000652561  n/a   
 
 
-
 
NC_011886  Achl_0642  two component transcriptional regulator, LuxR family  36.32 
 
 
208 aa  115  6e-25  Arthrobacter chlorophenolicus A6  Bacteria  n/a    normal 
 
 
-
 
NC_011884  Cyan7425_3249  two component transcriptional regulator, LuxR family  33.99 
 
 
211 aa  115  6.9999999999999995e-25  Cyanothece sp. PCC 7425  Bacteria  normal  0.414819  normal  0.558116 
 
 
-
 
NC_009972  Haur_1600  two component LuxR family transcriptional regulator  35.89 
 
 
207 aa  115  6.9999999999999995e-25  Herpetosiphon aurantiacus ATCC 23779  Bacteria  normal  n/a   
 
 
-
 
NC_014158  Tpau_1989  two component transcriptional regulator, LuxR family  37.07 
 
 
229 aa  114  7.999999999999999e-25  Tsukamurella paurometabola DSM 20162  Bacteria  normal  n/a   
 
 
-
 
NC_013552  DhcVS_934  DNA-binding response regulator, LuxR family  33.18 
 
 
232 aa  114  1.0000000000000001e-24  Dehalococcoides sp. VS  Bacteria  normal  0.717523  n/a   
 
 
-
 
NC_013739  Cwoe_1616  two component transcriptional regulator, LuxR family  34.1 
 
 
229 aa  114  1.0000000000000001e-24  Conexibacter woesei DSM 14684  Bacteria  normal  normal 
 
 
-
 
NC_008025  Dgeo_0555  two component LuxR family transcriptional regulator  34.8 
 
 
228 aa  114  1.0000000000000001e-24  Deinococcus geothermalis DSM 11300  Bacteria  normal  normal 
 
 
-
 
NC_011884  Cyan7425_1929  two component transcriptional regulator, LuxR family  33.97 
 
 
209 aa  114  1.0000000000000001e-24  Cyanothece sp. PCC 7425  Bacteria  normal  0.142226  normal 
 
 
-
 
NC_011658  BCAH187_A5591  DNA-binding response regulator  33.18 
 
 
215 aa  114  1.0000000000000001e-24  Bacillus cereus AH187  Bacteria  normal  n/a   
 
 
-
 
NC_010524  Lcho_1782  two component LuxR family transcriptional regulator  35.71 
 
 
214 aa  113  2.0000000000000002e-24  Leptothrix cholodnii SP-6  Bacteria  n/a    hitchhiker  0.000000360675 
 
 
-
 
NC_005945  BAS5263  DNA-binding response regulator  33.18 
 
 
215 aa  113  2.0000000000000002e-24  Bacillus anthracis str. Sterne  Bacteria  normal  0.24037  n/a   
 
 
-
 
NC_007530  GBAA_5661  DNA-binding response regulator  33.18 
 
 
215 aa  113  2.0000000000000002e-24  Bacillus anthracis str. 'Ames Ancestor'  Bacteria  normal  n/a   
 
 
-
 
NC_011725  BCB4264_A5535  DNA-binding response regulator  33.64 
 
 
215 aa  113  2.0000000000000002e-24  Bacillus cereus B4264  Bacteria  normal  n/a   
 
 
-
 
NC_008578  Acel_0518  two component LuxR family transcriptional regulator  35.71 
 
 
225 aa  113  2.0000000000000002e-24  Acidothermus cellulolyticus 11B  Bacteria  normal  normal  0.665179 
 
 
-
 
NC_013441  Gbro_4528  response regulator receiver  34.74 
 
 
213 aa  114  2.0000000000000002e-24  Gordonia bronchialis DSM 43247  Bacteria  normal  n/a   
 
 
-
 
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