More than 300 homologs were found in PanDaTox collection
for query gene Dred_1864 on replicon NC_009253
Organism: Desulfotomaculum reducens MI-1



Page 1 of 3    << first  < prev  1  2  3    next >  last >>   


Replicon accession
Locus tag
Product
% identity
Alignment on query gene
Alignment on homolog gene
Length
Bit score

E-value
Organism name
Kingdom
Plasmid clonability
Plasmid unclonability p-value
Fosmid clonability
Fosmid unclonability p-value
Coverage Plot
PanDaTox homologs
Experimental validation
NC_009253  Dred_1864  two component LuxR family transcriptional regulator  100 
 
 		 205 aa  417  1e-116  Desulfotomaculum reducens MI-1  Bacteria  normal  1  n/a   
 
 
-
 
NC_013385  Adeg_1034  two component transcriptional regulator, LuxR family  35.89 
 
 		 213 aa  131  6.999999999999999e-30  Ammonifex degensii KC4  Bacteria  normal  1  n/a   
 
 
-
 
NC_008025  Dgeo_0555  two component LuxR family transcriptional regulator  36.84 
 
 		 228 aa  129  3e-29  Deinococcus geothermalis DSM 11300  Bacteria  normal  1  normal  1 
 
 
-
 
NC_011884  Cyan7425_1401  two component transcriptional regulator, LuxR family  31.28 
 
 		 217 aa  127  1.0000000000000001e-28  Cyanothece sp. PCC 7425  Bacteria  normal  1  normal  0.482316 
 
 
-
 
NC_009972  Haur_1600  two component LuxR family transcriptional regulator  34.47 
 
 		 207 aa  126  2.0000000000000002e-28  Herpetosiphon aurantiacus ATCC 23779  Bacteria  normal  1  n/a   
 
 
-
 
NC_007644  Moth_0975  two component LuxR family transcriptional regulator  35.05 
 
 		 222 aa  126  2.0000000000000002e-28  Moorella thermoacetica ATCC 39073  Bacteria  normal  1  normal  1 
 
 
-
 
NC_011146  Gbem_2253  two component transcriptional regulator, LuxR family  35.1 
 
 		 216 aa  124  1e-27  Geobacter bemidjiensis Bem  Bacteria  normal  0.174263  n/a   
 
 
-
 
NC_011772  BCG9842_B5417  DNA-binding response regulator  33.02 
 
 		 215 aa  123  2e-27  Bacillus cereus G9842  Bacteria  normal  1  normal  1 
 
 
-
 
NC_010338  Caul_0621  two component LuxR family transcriptional regulator  31.53 
 
 		 212 aa  123  2e-27  Caulobacter sp. K31  Bacteria  normal  1  normal  0.881689 
 
 
-
 
NC_013411  GYMC61_3240  two component transcriptional regulator, LuxR family  31.22 
 
 		 224 aa  123  2e-27  Geobacillus sp. Y412MC61  Bacteria  n/a    n/a   
 
 
-
 
NC_011725  BCB4264_A5535  DNA-binding response regulator  33.02 
 
 		 215 aa  122  5e-27  Bacillus cereus B4264  Bacteria  normal  1  n/a   
 
 
-
 
NC_013595  Sros_0091  response regulator receiver protein  38.05 
 
 		 204 aa  121  7e-27  Streptosporangium roseum DSM 43021  Bacteria  normal  0.520551  normal  1 
 
 
-
 
NC_007777  Francci3_1039  two component LuxR family transcriptional regulator  30.99 
 
 		 238 aa  120  9.999999999999999e-27  Frankia sp. CcI3  Bacteria  normal  1  normal  0.135118 
 
 
-
 
NC_008009  Acid345_1691  two component LuxR family transcriptional regulator  32.52 
 
 		 208 aa  120  9.999999999999999e-27  Candidatus Koribacter versatilis Ellin345  Bacteria  normal  1  normal  0.0637899 
 
 
-
 
NC_011658  BCAH187_A5591  DNA-binding response regulator  32.09 
 
 		 215 aa  120  9.999999999999999e-27  Bacillus cereus AH187  Bacteria  normal  1  n/a   
 
 
-
 
NC_013131  Caci_7589  two component transcriptional regulator, LuxR family  29.15 
 
 		 225 aa  120  1.9999999999999998e-26  Catenulispora acidiphila DSM 44928  Bacteria  normal  0.438424  normal  0.37363 
 
 
-
 
NC_013441  Gbro_1936  regulatory protein LuxR  34.93 
 
 		 218 aa  120  1.9999999999999998e-26  Gordonia bronchialis DSM 43247  Bacteria  normal  0.548655  n/a   
 
 
-
 
NC_003909  BCE_5540  DNA-binding response regulator  32.09 
 
 		 215 aa  119  3e-26  Bacillus cereus ATCC 10987  Bacteria  normal  1  n/a   
 
 
-
 
NC_008148  Rxyl_1550  two component LuxR family transcriptional regulator  29.36 
 
 		 220 aa  119  3e-26  Rubrobacter xylanophilus DSM 9941  Bacteria  normal  1  n/a   
 
 
-
 
NC_009456  VC0395_0622  transcriptional regulator UhpA  34.9 
 
 		 208 aa  119  3e-26  Vibrio cholerae O395  Bacteria  normal  1  n/a   
 
 
-
 
NC_013946  Mrub_0806  two component LuxR family transcriptional regulator  33.49 
 
 		 216 aa  119  3.9999999999999996e-26  Meiothermus ruber DSM 1279  Bacteria  normal  1  normal  1 
 
 
-
 
NC_009972  Haur_4778  two component LuxR family transcriptional regulator  32.2 
 
 		 208 aa  118  4.9999999999999996e-26  Herpetosiphon aurantiacus ATCC 23779  Bacteria  hitchhiker  0.00000269792  n/a   
 
 
-
 
NC_013595  Sros_1684  response regulator receiver protein  32.84 
 
 		 207 aa  118  6e-26  Streptosporangium roseum DSM 43021  Bacteria  normal  1  normal  0.966789 
 
 
-
 
NC_010184  BcerKBAB4_5205  two component LuxR family transcriptional regulator  32.09 
 
 		 215 aa  118  6e-26  Bacillus weihenstephanensis KBAB4  Bacteria  normal  1  n/a   
 
 
-
 
NC_005945  BAS5263  DNA-binding response regulator  32.09 
 
 		 215 aa  118  7e-26  Bacillus anthracis str. Sterne  Bacteria  normal  0.24037  n/a   
 
 
-
 
NC_005957  BT9727_5091  response regulator  32.09 
 
 		 215 aa  118  7e-26  Bacillus thuringiensis serovar konkukian str. 97-27  Bacteria  normal  1  n/a   
 
 
-
 
NC_006274  BCZK5108  response regulator  32.09 
 
 		 215 aa  118  7e-26  Bacillus cereus E33L  Bacteria  decreased coverage  0.00235048  n/a   
 
 
-
 
NC_007412  Ava_C0116  two component LuxR family transcriptional regulator  31.34 
 
 		 209 aa  118  7e-26  Anabaena variabilis ATCC 29413  Bacteria  normal  1  normal  1 
 
 
-
 
NC_007530  GBAA_5661  DNA-binding response regulator  32.09 
 
 		 215 aa  118  7e-26  Bacillus anthracis str. 'Ames Ancestor'  Bacteria  normal  1  n/a   
 
 
-
 
NC_011773  BCAH820_5506  DNA-binding response regulator  32.09 
 
 		 215 aa  118  7e-26  Bacillus cereus AH820  Bacteria  n/a    normal  1 
 
 
-
 
NC_011884  Cyan7425_3249  two component transcriptional regulator, LuxR family  33 
 
 		 211 aa  117  9.999999999999999e-26  Cyanothece sp. PCC 7425  Bacteria  normal  0.414819  normal  0.558116 
 
 
-
 
NC_009012  Cthe_1267  two component LuxR family transcriptional regulator  33.18 
 
 		 216 aa  117  9.999999999999999e-26  Clostridium thermocellum ATCC 27405  Bacteria  normal  1  n/a   
 
 
-
 
NC_011830  Dhaf_1205  two component transcriptional regulator, LuxR family  34.12 
 
 		 212 aa  117  9.999999999999999e-26  Desulfitobacterium hafniense DCB-2  Bacteria  normal  1  n/a   
 
 
-
 
NC_009921  Franean1_5512  two component LuxR family transcriptional regulator  30.52 
 
 		 250 aa  116  1.9999999999999998e-25  Frankia sp. EAN1pec  Bacteria  normal  1  normal  0.631776 
 
 
-
 
NC_013525  Tter_0300  two component transcriptional regulator, LuxR family  33.02 
 
 		 224 aa  116  1.9999999999999998e-25  Thermobaculum terrenum ATCC BAA-798  Bacteria  n/a    n/a   
 
 
-
 
NC_011662  Tmz1t_1311  two component transcriptional regulator, LuxR family  31.46 
 
 		 226 aa  116  1.9999999999999998e-25  Thauera sp. MZ1T  Bacteria  normal  0.165019  n/a   
 
 
-
 
NC_010571  Oter_1284  two component LuxR family transcriptional regulator  33.99 
 
 		 209 aa  116  3e-25  Opitutus terrae PB90-1  Bacteria  normal  0.479266  normal  1 
 
 
-
 
NC_009523  RoseRS_1984  two component LuxR family transcriptional regulator  31.6 
 
 		 220 aa  116  3e-25  Roseiflexus sp. RS-1  Bacteria  normal  0.178457  normal  0.123783 
 
 
-
 
NC_008825  Mpe_A0357  two-component response regulator  33.82 
 
 		 210 aa  115  3e-25  Methylibium petroleiphilum PM1  Bacteria  hitchhiker  0.00848176  normal  1 
 
 
-
 
NC_002939  GSU1293  LuxR family DNA-binding response regulator  30.95 
 
 		 216 aa  115  3.9999999999999997e-25  Geobacter sulfurreducens PCA  Bacteria  normal  1  n/a   
 
 
-
 
NC_012918  GM21_1971  two component transcriptional regulator, LuxR family  33.17 
 
 		 216 aa  115  3.9999999999999997e-25  Geobacter sp. M21  Bacteria  n/a    normal  1 
 
 
-
 
NC_009943  Dole_0029  two component LuxR family transcriptional regulator  33.8 
 
 		 214 aa  115  5e-25  Desulfococcus oleovorans Hxd3  Bacteria  normal  0.317943  n/a   
 
 
-
 
NC_013947  Snas_2579  two component transcriptional regulator, LuxR family  32.85 
 
 		 213 aa  115  5e-25  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  1  normal  0.0500394 
 
 
-
 
NC_012918  GM21_0467  two component transcriptional regulator, LuxR family  31.28 
 
 		 216 aa  114  1.0000000000000001e-24  Geobacter sp. M21  Bacteria  n/a    hitchhiker  0.000507383 
 
 
-
 
NC_013946  Mrub_1071  two component LuxR family transcriptional regulator  33.66 
 
 		 209 aa  114  1.0000000000000001e-24  Meiothermus ruber DSM 1279  Bacteria  normal  1  normal  1 
 
 
-
 
NC_007644  Moth_0023  two component LuxR family transcriptional regulator  32.09 
 
 		 221 aa  114  1.0000000000000001e-24  Moorella thermoacetica ATCC 39073  Bacteria  normal  0.273145  hitchhiker  0.00000136124 
 
 
-
 
NC_007760  Adeh_1997  two component LuxR family transcriptional regulator  29.3 
 
 		 218 aa  114  1.0000000000000001e-24  Anaeromyxobacter dehalogenans 2CP-C  Bacteria  normal  1  n/a   
 
 
-
 
NC_014212  Mesil_1051  two component transcriptional regulator, LuxR family  33.65 
 
 		 211 aa  114  1.0000000000000001e-24  Meiothermus silvanus DSM 9946  Bacteria  normal  1  normal  0.0337978 
 
 
-
 
NC_014212  Mesil_2510  two component transcriptional regulator, LuxR family  32.06 
 
 		 217 aa  114  1.0000000000000001e-24  Meiothermus silvanus DSM 9946  Bacteria  normal  1  normal  1 
 
 
-
 
NC_011891  A2cp1_1966  two component transcriptional regulator, LuxR family  29.77 
 
 		 218 aa  114  1.0000000000000001e-24  Anaeromyxobacter dehalogenans 2CP-1  Bacteria  normal  1  n/a   
 
 
-
 
NC_008148  Rxyl_0160  two component LuxR family transcriptional regulator  32.52 
 
 		 212 aa  114  1.0000000000000001e-24  Rubrobacter xylanophilus DSM 9941  Bacteria  normal  1  n/a   
 
 
-
 
NC_013521  Sked_03860  response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain  32.2 
 
 		 204 aa  114  1.0000000000000001e-24  Sanguibacter keddieii DSM 10542  Bacteria  normal  0.0649288  normal  0.281143 
 
 
-
 
NC_013595  Sros_4744  response regulator receiver protein  30.39 
 
 		 209 aa  114  1.0000000000000001e-24  Streptosporangium roseum DSM 43021  Bacteria  normal  0.620464  normal  0.690137 
 
 
-
 
NC_011145  AnaeK_1881  two component transcriptional regulator, LuxR family  29.77 
 
 		 218 aa  114  1.0000000000000001e-24  Anaeromyxobacter sp. K  Bacteria  normal  0.0160211  n/a   
 
 
-
 
NC_011146  Gbem_0451  two component transcriptional regulator, LuxR family  30.48 
 
 		 216 aa  114  1.0000000000000001e-24  Geobacter bemidjiensis Bem  Bacteria  normal  1  n/a   
 
 
-
 
NC_009921  Franean1_0528  two component LuxR family transcriptional regulator  32.34 
 
 		 201 aa  113  2.0000000000000002e-24  Frankia sp. EAN1pec  Bacteria  normal  0.653057  normal  1 
 
 
-
 
NC_007413  Ava_2028  two component LuxR family transcriptional regulator  32.06 
 
 		 219 aa  113  2.0000000000000002e-24  Anabaena variabilis ATCC 29413  Bacteria  normal  0.515359  normal  1 
 
 
-
 
NC_009674  Bcer98_3871  two component LuxR family transcriptional regulator  34.83 
 
 		 200 aa  113  2.0000000000000002e-24  Bacillus cytotoxicus NVH 391-98  Bacteria  hitchhiker  0.00685623  n/a   
 
 
-
 
NC_014210  Ndas_0346  two component transcriptional regulator, LuxR family  31.55 
 
 		 210 aa  113  2.0000000000000002e-24  Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111  Bacteria  normal  0.0205277  normal  0.823307 
 
 
-
 
NC_013501  Rmar_1005  two component transcriptional regulator, LuxR family  32.34 
 
 		 211 aa  113  2.0000000000000002e-24  Rhodothermus marinus DSM 4252  Bacteria  normal  1  n/a   
 
 
-
 
NC_008699  Noca_2943  two component LuxR family transcriptional regulator  33.33 
 
 		 215 aa  113  2.0000000000000002e-24  Nocardioides sp. JS614  Bacteria  normal  1  n/a   
 
 
-
 
NC_009253  Dred_2108  two component LuxR family transcriptional regulator  32.41 
 
 		 218 aa  113  2.0000000000000002e-24  Desulfotomaculum reducens MI-1  Bacteria  normal  1  n/a   
 
 
-
 
NC_011898  Ccel_1863  two component transcriptional regulator, LuxR family  33.02 
 
 		 216 aa  112  3e-24  Clostridium cellulolyticum H10  Bacteria  hitchhiker  0.00000548978  n/a   
 
 
-
 
NC_007777  Francci3_0765  two component LuxR family transcriptional regulator  28.84 
 
 		 237 aa  112  3e-24  Frankia sp. CcI3  Bacteria  normal  0.272345  normal  1 
 
 
-
 
NC_009921  Franean1_5840  two component LuxR family transcriptional regulator  28.37 
 
 		 237 aa  112  4.0000000000000004e-24  Frankia sp. EAN1pec  Bacteria  normal  0.0206065  normal  0.380036 
 
 
-
 
NC_011831  Cagg_2804  two component transcriptional regulator, LuxR family  31.22 
 
 		 216 aa  112  4.0000000000000004e-24  Chloroflexus aggregans DSM 9485  Bacteria  normal  0.995251  normal  0.311692 
 
 
-
 
NC_009483  Gura_0759  two component LuxR family transcriptional regulator  31.92 
 
 		 217 aa  112  4.0000000000000004e-24  Geobacter uraniireducens Rf4  Bacteria  decreased coverage  0.00000000356105  n/a   
 
 
-
 
NC_013235  Namu_4606  two component transcriptional regulator, LuxR family  34.15 
 
 		 207 aa  112  5e-24  Nakamurella multipartita DSM 44233  Bacteria  normal  1  normal  0.296562 
 
 
-
 
NC_011662  Tmz1t_1954  two component transcriptional regulator, LuxR family  31.58 
 
 		 220 aa  112  5e-24  Thauera sp. MZ1T  Bacteria  normal  0.228638  n/a   
 
 
-
 
NC_013595  Sros_0928  response regulator receiver protein  34.3 
 
 		 207 aa  112  5e-24  Streptosporangium roseum DSM 43021  Bacteria  normal  0.0707495  normal  1 
 
 
-
 
NC_009675  Anae109_1810  two component LuxR family transcriptional regulator  29.3 
 
 		 218 aa  111  6e-24  Anaeromyxobacter sp. Fw109-5  Bacteria  normal  1  normal  1 
 
 
-
 
NC_008009  Acid345_2443  two component LuxR family transcriptional regulator  30.85 
 
 		 215 aa  112  6e-24  Candidatus Koribacter versatilis Ellin345  Bacteria  normal  1  normal  1 
 
 
-
 
NC_013552  DhcVS_374  DNA-binding response regulator, LuxR family  32.87 
 
 		 232 aa  111  8.000000000000001e-24  Dehalococcoides sp. VS  Bacteria  hitchhiker  0.0000120759  n/a   
 
 
-
 
NC_012669  Bcav_1588  two component transcriptional regulator, LuxR family  32.16 
 
 		 201 aa  111  8.000000000000001e-24  Beutenbergia cavernae DSM 12333  Bacteria  normal  0.117504  normal  1 
 
 
-
 
NC_007519  Dde_0977  two component LuxR family transcriptional regulator  33.8 
 
 		 223 aa  110  1.0000000000000001e-23  Desulfovibrio desulfuricans subsp. desulfuricans str. G20  Bacteria  decreased coverage  0.00800748  n/a   
 
 
-
 
NC_007947  Mfla_0815  two component LuxR family transcriptional regulator  33.49 
 
 		 213 aa  110  1.0000000000000001e-23  Methylobacillus flagellatus KT  Bacteria  hitchhiker  0.00000180305  normal  1 
 
 
-
 
NC_013522  Taci_0801  two component transcriptional regulator, LuxR family  31.75 
 
 		 227 aa  110  1.0000000000000001e-23  Thermanaerovibrio acidaminovorans DSM 6589  Bacteria  normal  1  n/a   
 
 
-
 
NC_008578  Acel_1760  two component LuxR family transcriptional regulator  29.22 
 
 		 303 aa  110  1.0000000000000001e-23  Acidothermus cellulolyticus 11B  Bacteria  normal  1  normal  0.887336 
 
 
-
 
NC_009455  DehaBAV1_0409  two component LuxR family transcriptional regulator  32.87 
 
 		 232 aa  110  1.0000000000000001e-23  Dehalococcoides sp. BAV1  Bacteria  normal  0.135269  n/a   
 
 
-
 
NC_014248  Aazo_0236  LuxR family two component transcriptional regulator  31.73 
 
 		 218 aa  110  2.0000000000000002e-23  'Nostoc azollae' 0708  Bacteria  normal  1  n/a   
 
 
-
 
NC_002936  DET0432  LuxR family DNA-binding response regulator  33.33 
 
 		 232 aa  110  2.0000000000000002e-23  Dehalococcoides ethenogenes 195  Bacteria  hitchhiker  0.00543066  n/a   
 
 
-
 
NC_012793  GWCH70_3043  two component transcriptional regulator, LuxR family  31.08 
 
 		 225 aa  110  2.0000000000000002e-23  Geobacillus sp. WCH70  Bacteria  decreased coverage  0.0000000652561  n/a   
 
 
-
 
NC_010002  Daci_5322  two component LuxR family transcriptional regulator  31.09 
 
 		 220 aa  110  2.0000000000000002e-23  Delftia acidovorans SPH-1  Bacteria  normal  1  normal  0.929677 
 
 
-
 
NC_010320  Teth514_2042  two component LuxR family transcriptional regulator  31.16 
 
 		 208 aa  109  2.0000000000000002e-23  Thermoanaerobacter sp. X514  Bacteria  normal  1  n/a   
 
 
-
 
NC_009380  Strop_3824  response regulator receiver  30.05 
 
 		 228 aa  110  2.0000000000000002e-23  Salinispora tropica CNB-440  Bacteria  normal  0.206519  normal  1 
 
 
-
 
NC_011899  Hore_21820  two component transcriptional regulator, LuxR family  30.14 
 
 		 211 aa  109  3e-23  Halothermothrix orenii H 168  Bacteria  normal  1  n/a   
 
 
-
 
NC_008825  Mpe_A1026  response regulator protein  29.35 
 
 		 217 aa  109  3e-23  Methylibium petroleiphilum PM1  Bacteria  normal  1  normal  1 
 
 
-
 
NC_014158  Tpau_4145  two component transcriptional regulator, LuxR family  33.17 
 
 		 216 aa  108  4.0000000000000004e-23  Tsukamurella paurometabola DSM 20162  Bacteria  normal  1  n/a   
 
 
-
 
NC_007498  Pcar_1400  two component signal transduction response regulator  32.56 
 
 		 214 aa  108  4.0000000000000004e-23  Pelobacter carbinolicus DSM 2380  Bacteria  normal  1  n/a   
 
 
-
 
NC_014211  Ndas_4922  two component transcriptional regulator, LuxR family  29.9 
 
 		 206 aa  108  4.0000000000000004e-23  Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111  Bacteria  normal  0.0302523  normal  1 
 
 
-
 
NC_013124  Afer_1446  two component transcriptional regulator, LuxR family  30.58 
 
 		 223 aa  108  5e-23  Acidimicrobium ferrooxidans DSM 10331  Bacteria  normal  1  n/a   
 
 
-
 
NC_009664  Krad_3810  two component transcriptional regulator, LuxR family  31.05 
 
 		 236 aa  108  5e-23  Kineococcus radiotolerans SRS30216  Bacteria  normal  0.225059  normal  0.0261757 
 
 
-
 
NC_011886  Achl_3380  two component transcriptional regulator, LuxR family  32.86 
 
 		 222 aa  108  5e-23  Arthrobacter chlorophenolicus A6  Bacteria  n/a    normal  1 
 
 
-
 
NC_013510  Tcur_1532  two component transcriptional regulator, LuxR family  32.7 
 
 		 220 aa  108  5e-23  Thermomonospora curvata DSM 43183  Bacteria  normal  0.0114765  n/a   
 
 
-
 
NC_009380  Strop_3279  response regulator receiver  33.17 
 
 		 221 aa  108  5e-23  Salinispora tropica CNB-440  Bacteria  normal  0.97215  normal  1 
 
 
-
 
NC_014165  Tbis_0775  LuxR family two component transcriptional regulator  29.36 
 
 		 234 aa  108  6e-23  Thermobispora bispora DSM 43833  Bacteria  normal  1  normal  0.336237 
 
 
-
 
NC_009953  Sare_3511  two component LuxR family transcriptional regulator  33.17 
 
 		 221 aa  108  6e-23  Salinispora arenicola CNS-205  Bacteria  normal  1  normal  0.0444635 
 
 
-
 
NC_008025  Dgeo_0315  two component LuxR family transcriptional regulator  33.33 
 
 		 214 aa  108  6e-23  Deinococcus geothermalis DSM 11300  Bacteria  normal  1  hitchhiker  0.0084678 
 
 
-
 
NC_013172  Bfae_00310  response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain  31.28 
 
 		 213 aa  108  6e-23  Brachybacterium faecium DSM 4810  Bacteria  normal  1  n/a   
 
 
-
 
NC_010571  Oter_2926  two component LuxR family transcriptional regulator  34.16 
 
 		 223 aa  107  8.000000000000001e-23  Opitutus terrae PB90-1  Bacteria  normal  0.380263  normal  1 
 
 
-
 
Page 1 of 3    << first  < prev  1  2  3    next >  last >>