Gene Sked_03860 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSked_03860 
Symbol 
ID8632024 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSanguibacter keddieii DSM 10542 
KingdomBacteria 
Replicon accessionNC_013521 
Strand
Start bp430740 
End bp431354 
Gene Length615 bp 
Protein Length204 aa 
Translation table11 
GC content74% 
IMG OID 
Productresponse regulator containing a CheY-like receiver domain and an HTH DNA-binding domain 
Protein accessionYP_003313187 
Protein GI269793732 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value0.0649288 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones21 
Fosmid unclonability p-value0.281143 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGCCGACCG CCATCCGTGT CCTGCTCGCG GACGACGAGA ACCTCATCCG TACCGCCGTC 
GCCACGCTGC TCGGGCTGGA GGACGACCTC GACGTCGTCG CCCAGGCGGC GACCGGCGAC
GAGGCGCTCG CCGTCGCGCT GCGCACCACC CCCGACGTCG CGGTCCTCGA CCTGCAGATG
CCCGGCCTCG ACGGCATCGA GGTCGCCGAG CGCCTCGCGA CGCAGCTGCC CGGTTGTCGC
TGCATCATCG TCACGAGCCA CGGCCGCCCC GGCTACCTCA AGCGCGCGCT CGCCGTCGGA
GTCCGCGGGT TCCTGCCCAA GACGGCCTCC GCGCTCGTGG TCGCCGACGT CGTGCGGTCC
GTGCACGCCG GCGGTCGCTA CGTCGACCCC GAGCTCGCCG CCGAGGCCAT CGCCTCCGGT
GACAGCCCGC TCACCGCCCG CGAGGCCGAC GTGCTCGCAC TGGCAGCGGA CGGCTCCCCG
GTCGACGAGA TCGCCCAGCG GGTGTCGCTG TCGGCGGGCA CGGTCCGCAA CTACCTGTCG
ACCGCCGTCA TGAAGCTCGG CGTCTCCAAC CGCCACGAGG CAGCGGCGAC GGCCCGCCGC
CACGGCTGGA TCTGA
 
Protein sequence
MPTAIRVLLA DDENLIRTAV ATLLGLEDDL DVVAQAATGD EALAVALRTT PDVAVLDLQM 
PGLDGIEVAE RLATQLPGCR CIIVTSHGRP GYLKRALAVG VRGFLPKTAS ALVVADVVRS
VHAGGRYVDP ELAAEAIASG DSPLTAREAD VLALAADGSP VDEIAQRVSL SAGTVRNYLS
TAVMKLGVSN RHEAAATARR HGWI