More than 300 homologs were found in PanDaTox collection
for query gene Caci_6781 on replicon NC_013131
Organism: Catenulispora acidiphila DSM 44928



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Replicon accession
Locus tag
Product
% identity
Alignment on query gene
Alignment on homolog gene
Length
Bit score

E-value
Organism name
Kingdom
Plasmid clonability
Plasmid unclonability p-value
Fosmid clonability
Fosmid unclonability p-value
Coverage Plot
PanDaTox homologs
Experimental validation
NC_013131  Caci_6781  two component transcriptional regulator, LuxR family  100 
 
 		 232 aa  440  9.999999999999999e-123  Catenulispora acidiphila DSM 44928  Bacteria  normal  1  normal  0.516576 
 
 
-
 
NC_008578  Acel_1390  two component LuxR family transcriptional regulator  53.7 
 
 		 225 aa  191  9e-48  Acidothermus cellulolyticus 11B  Bacteria  normal  1  normal  1 
 
 
-
 
NC_009664  Krad_1583  two component transcriptional regulator, LuxR family  47.44 
 
 		 200 aa  164  1.0000000000000001e-39  Kineococcus radiotolerans SRS30216  Bacteria  decreased coverage  0.00238178  normal  0.469918 
 
 
-
 
NC_013093  Amir_1549  two component transcriptional regulator, LuxR family  44.05 
 
 		 238 aa  161  9e-39  Actinosynnema mirum DSM 43827  Bacteria  normal  0.196807  n/a   
 
 
-
 
NC_013235  Namu_3546  two component transcriptional regulator, LuxR family  40.65 
 
 		 229 aa  108  8.000000000000001e-23  Nakamurella multipartita DSM 44233  Bacteria  decreased coverage  0.00000843196  hitchhiker  0.00749158 
 
 
-
 
NC_014151  Cfla_1727  transcriptional regulator, LuxR family  69.35 
 
 		 137 aa  85.5  6e-16  Cellulomonas flavigena DSM 20109  Bacteria  normal  1  normal  0.0510322 
 
 
-
 
NC_013235  Namu_3769  transcriptional regulator, LuxR family  68.85 
 
 		 205 aa  84.7  0.000000000000001  Nakamurella multipartita DSM 44233  Bacteria  normal  0.0158689  normal  0.601222 
 
 
-
 
NC_007974  Rmet_5165  two component LuxR family transcriptional regulator  36.06 
 
 		 231 aa  83.6  0.000000000000003  Cupriavidus metallidurans CH34  Bacteria  normal  1  normal  0.162111 
 
 
-
 
NC_013411  GYMC61_3240  two component transcriptional regulator, LuxR family  31.28 
 
 		 224 aa  82.8  0.000000000000004  Geobacillus sp. Y412MC61  Bacteria  n/a    n/a   
 
 
-
 
NC_012669  Bcav_0717  two component transcriptional regulator, LuxR family  35.81 
 
 		 209 aa  78.2  0.0000000000001  Beutenbergia cavernae DSM 12333  Bacteria  normal  0.854815  normal  0.189113 
 
 
-
 
NC_008752  Aave_1121  two component LuxR family transcriptional regulator  38.41 
 
 		 222 aa  77.8  0.0000000000001  Acidovorax citrulli AAC00-1  Bacteria  normal  0.864132  normal  0.872256 
 
 
-
 
NC_013124  Afer_1981  two component transcriptional regulator, LuxR family  34.1 
 
 		 222 aa  77.4  0.0000000000002  Acidimicrobium ferrooxidans DSM 10331  Bacteria  normal  1  n/a   
 
 
-
 
NC_007947  Mfla_0447  two component LuxR family transcriptional regulator  33.65 
 
 		 244 aa  77  0.0000000000002  Methylobacillus flagellatus KT  Bacteria  normal  0.013193  normal  0.6128 
 
 
-
 
NC_007404  Tbd_2786  two component LuxR family transcriptional regulator  32.97 
 
 		 210 aa  76.3  0.0000000000004  Thiobacillus denitrificans ATCC 25259  Bacteria  normal  0.0443035  normal  0.922606 
 
 
-
 
NC_010718  Nther_0648  two component transcriptional regulator, LuxR family  27.49 
 
 		 215 aa  75.1  0.0000000000008  Natranaerobius thermophilus JW/NM-WN-LF  Bacteria  normal  1  normal  1 
 
 
-
 
NC_011830  Dhaf_1230  two component transcriptional regulator, LuxR family  28.57 
 
 		 215 aa  74.7  0.000000000001  Desulfitobacterium hafniense DCB-2  Bacteria  normal  1  n/a   
 
 
-
 
NC_007760  Adeh_1997  two component LuxR family transcriptional regulator  33.01 
 
 		 218 aa  73.6  0.000000000002  Anaeromyxobacter dehalogenans 2CP-C  Bacteria  normal  1  n/a   
 
 
-
 
NC_007952  Bxe_B2928  two component LuxR family transcriptional regulator  34.88 
 
 		 213 aa  73.9  0.000000000002  Burkholderia xenovorans LB400  Bacteria  normal  1  normal  1 
 
 
-
 
NC_010338  Caul_2685  two component LuxR family transcriptional regulator  29.67 
 
 		 222 aa  73.9  0.000000000002  Caulobacter sp. K31  Bacteria  normal  0.120511  normal  1 
 
 
-
 
NC_013530  Xcel_0190  two component transcriptional regulator, LuxR family  33.5 
 
 		 219 aa  73.9  0.000000000002  Xylanimonas cellulosilytica DSM 15894  Bacteria  normal  0.146862  n/a   
 
 
-
 
NC_013510  Tcur_1532  two component transcriptional regulator, LuxR family  29.58 
 
 		 220 aa  73.2  0.000000000003  Thermomonospora curvata DSM 43183  Bacteria  normal  0.0114765  n/a   
 
 
-
 
NC_011899  Hore_21820  two component transcriptional regulator, LuxR family  27.81 
 
 		 211 aa  73.2  0.000000000003  Halothermothrix orenii H 168  Bacteria  normal  1  n/a   
 
 
-
 
NC_012793  GWCH70_3043  two component transcriptional regulator, LuxR family  29.69 
 
 		 225 aa  73.6  0.000000000003  Geobacillus sp. WCH70  Bacteria  decreased coverage  0.0000000652561  n/a   
 
 
-
 
NC_010623  Bphy_4331  two component LuxR family transcriptional regulator  31.8 
 
 		 212 aa  73.6  0.000000000003  Burkholderia phymatum STM815  Bacteria  normal  0.748519  normal  1 
 
 
-
 
NC_009708  YpsIP31758_2160  LuxR family DNA-binding response regulator  32.03 
 
 		 210 aa  73.2  0.000000000004  Yersinia pseudotuberculosis IP 31758  Bacteria  normal  1  n/a   
 
 
-
 
NC_010465  YPK_2269  two component LuxR family transcriptional regulator  32.03 
 
 		 210 aa  73.2  0.000000000004  Yersinia pseudotuberculosis YPIII  Bacteria  normal  1  n/a   
 
 
-
 
NC_011891  A2cp1_1966  two component transcriptional regulator, LuxR family  33.53 
 
 		 218 aa  72.8  0.000000000004  Anaeromyxobacter dehalogenans 2CP-1  Bacteria  normal  1  n/a   
 
 
-
 
NC_011145  AnaeK_1881  two component transcriptional regulator, LuxR family  33.53 
 
 		 218 aa  72.8  0.000000000004  Anaeromyxobacter sp. K  Bacteria  normal  0.0160211  n/a   
 
 
-
 
NC_008148  Rxyl_1550  two component LuxR family transcriptional regulator  31.86 
 
 		 220 aa  72.4  0.000000000005  Rubrobacter xylanophilus DSM 9941  Bacteria  normal  1  n/a   
 
 
-
 
NC_009921  Franean1_2449  two component LuxR family transcriptional regulator  33.66 
 
 		 211 aa  72.4  0.000000000005  Frankia sp. EAN1pec  Bacteria  normal  1  normal  0.265588 
 
 
-
 
NC_009511  Swit_0804  two component LuxR family transcriptional regulator  30.8 
 
 		 229 aa  72.8  0.000000000005  Sphingomonas wittichii RW1  Bacteria  normal  1  normal  1 
 
 
-
 
NC_013739  Cwoe_1616  two component transcriptional regulator, LuxR family  34.17 
 
 		 229 aa  72.4  0.000000000006  Conexibacter woesei DSM 14684  Bacteria  normal  1  normal  1 
 
 
-
 
NC_010320  Teth514_2042  two component LuxR family transcriptional regulator  27.49 
 
 		 208 aa  72  0.000000000007  Thermoanaerobacter sp. X514  Bacteria  normal  1  n/a   
 
 
-
 
NC_013124  Afer_0180  two component transcriptional regulator, LuxR family  36.51 
 
 		 216 aa  71.6  0.000000000009  Acidimicrobium ferrooxidans DSM 10331  Bacteria  normal  0.245465  n/a   
 
 
-
 
NC_014151  Cfla_2563  two component transcriptional regulator, LuxR family  33.73 
 
 		 229 aa  71.6  0.000000000009  Cellulomonas flavigena DSM 20109  Bacteria  normal  0.127898  normal  1 
 
 
-
 
NC_011898  Ccel_1863  two component transcriptional regulator, LuxR family  25.56 
 
 		 216 aa  71.6  0.00000000001  Clostridium cellulolyticum H10  Bacteria  hitchhiker  0.00000548978  n/a   
 
 
-
 
NC_007925  RPC_3796  two component LuxR family transcriptional regulator  30.95 
 
 		 209 aa  71.2  0.00000000001  Rhodopseudomonas palustris BisB18  Bacteria  normal  1  normal  1 
 
 
-
 
NC_013441  Gbro_1936  regulatory protein LuxR  36.99 
 
 		 218 aa  71.2  0.00000000001  Gordonia bronchialis DSM 43247  Bacteria  normal  0.548655  n/a   
 
 
-
 
NC_009253  Dred_2108  two component LuxR family transcriptional regulator  28.49 
 
 		 218 aa  71.6  0.00000000001  Desulfotomaculum reducens MI-1  Bacteria  normal  1  n/a   
 
 
-
 
NC_009719  Plav_1134  two component LuxR family transcriptional regulator  31.98 
 
 		 213 aa  70.9  0.00000000002  Parvibaculum lavamentivorans DS-1  Bacteria  normal  1  normal  1 
 
 
-
 
NC_009921  Franean1_4062  two component LuxR family transcriptional regulator  32.34 
 
 		 216 aa  70.5  0.00000000002  Frankia sp. EAN1pec  Bacteria  normal  0.0448793  normal  0.300284 
 
 
-
 
NC_010159  YpAngola_A2113  LuxR family DNA-binding response regulator  32.47 
 
 		 210 aa  70.1  0.00000000002  Yersinia pestis Angola  Bacteria  normal  1  normal  0.616678 
 
 
-
 
NC_010676  Bphyt_6883  two component transcriptional regulator, LuxR family  33.64 
 
 		 213 aa  69.7  0.00000000003  Burkholderia phytofirmans PsJN  Bacteria  normal  0.239531  normal  0.170628 
 
 
-
 
NC_009921  Franean1_6933  two component LuxR family transcriptional regulator  32.34 
 
 		 244 aa  70.1  0.00000000003  Frankia sp. EAN1pec  Bacteria  normal  1  normal  0.322421 
 
 
-
 
NC_008009  Acid345_2443  two component LuxR family transcriptional regulator  30.16 
 
 		 215 aa  69.3  0.00000000004  Candidatus Koribacter versatilis Ellin345  Bacteria  normal  1  normal  1 
 
 
-
 
NC_010338  Caul_0621  two component LuxR family transcriptional regulator  34.92 
 
 		 212 aa  69.7  0.00000000004  Caulobacter sp. K31  Bacteria  normal  1  normal  0.881689 
 
 
-
 
NC_013530  Xcel_0094  two component transcriptional regulator, LuxR family  34.41 
 
 		 220 aa  69.3  0.00000000004  Xylanimonas cellulosilytica DSM 15894  Bacteria  normal  1  n/a   
 
 
-
 
NC_013947  Snas_5644  two component transcriptional regulator, LuxR family  33.18 
 
 		 225 aa  69.7  0.00000000004  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  1  normal  0.114252 
 
 
-
 
NC_009012  Cthe_1267  two component LuxR family transcriptional regulator  28.24 
 
 		 216 aa  68.9  0.00000000006  Clostridium thermocellum ATCC 27405  Bacteria  normal  1  n/a   
 
 
-
 
NC_009921  Franean1_6351  two component LuxR family transcriptional regulator  32 
 
 		 244 aa  68.9  0.00000000006  Frankia sp. EAN1pec  Bacteria  normal  1  normal  1 
 
 
-
 
NC_012791  Vapar_4377  two component transcriptional regulator, LuxR family  31.22 
 
 		 237 aa  68.9  0.00000000006  Variovorax paradoxus S110  Bacteria  normal  0.237342  n/a   
 
 
-
 
NC_011830  Dhaf_2789  two component transcriptional regulator, LuxR family  29.82 
 
 		 212 aa  68.9  0.00000000007  Desulfitobacterium hafniense DCB-2  Bacteria  normal  0.246733  n/a   
 
 
-
 
NC_009972  Haur_1600  two component LuxR family transcriptional regulator  30.05 
 
 		 207 aa  68.6  0.00000000009  Herpetosiphon aurantiacus ATCC 23779  Bacteria  normal  1  n/a   
 
 
-
 
NC_009675  Anae109_1810  two component LuxR family transcriptional regulator  33.14 
 
 		 218 aa  67.8  0.0000000001  Anaeromyxobacter sp. Fw109-5  Bacteria  normal  1  normal  1 
 
 
-
 
NC_007778  RPB_3850  two component LuxR family transcriptional regulator  30.09 
 
 		 209 aa  68.2  0.0000000001  Rhodopseudomonas palustris HaA2  Bacteria  normal  1  normal  1 
 
 
-
 
NC_009338  Mflv_3579  two component LuxR family transcriptional regulator  30.84 
 
 		 217 aa  68.2  0.0000000001  Mycobacterium gilvum PYR-GCK  Bacteria  normal  0.393396  normal  0.0540104 
 
 
-
 
NC_010002  Daci_5322  two component LuxR family transcriptional regulator  33.81 
 
 		 220 aa  67.8  0.0000000001  Delftia acidovorans SPH-1  Bacteria  normal  1  normal  0.929677 
 
 
-
 
NC_010001  Cphy_3936  two component LuxR family transcriptional regulator  25.23 
 
 		 213 aa  67.8  0.0000000001  Clostridium phytofermentans ISDg  Bacteria  hitchhiker  0.00507176  n/a   
 
 
-
 
NC_013510  Tcur_1651  two component transcriptional regulator, LuxR family  33.82 
 
 		 218 aa  67  0.0000000002  Thermomonospora curvata DSM 43183  Bacteria  hitchhiker  0.000163278  n/a   
 
 
-
 
NC_013595  Sros_0553  response regulator receiver protein  30.05 
 
 		 213 aa  67  0.0000000002  Streptosporangium roseum DSM 43021  Bacteria  normal  0.82888  normal  1 
 
 
-
 
NC_007777  Francci3_3253  two component LuxR family transcriptional regulator  32.69 
 
 		 213 aa  67  0.0000000002  Frankia sp. CcI3  Bacteria  normal  1  normal  1 
 
 
-
 
NC_007974  Rmet_5714  two component LuxR family transcriptional regulator  28.64 
 
 		 210 aa  67.4  0.0000000002  Cupriavidus metallidurans CH34  Bacteria  normal  1  normal  1 
 
 
-
 
NC_011071  Smal_2340  two component transcriptional regulator, LuxR family  33.15 
 
 		 217 aa  67.4  0.0000000002  Stenotrophomonas maltophilia R551-3  Bacteria  normal  0.273151  normal  1 
 
 
-
 
NC_011886  Achl_2073  two component transcriptional regulator, LuxR family  29.95 
 
 		 226 aa  67  0.0000000002  Arthrobacter chlorophenolicus A6  Bacteria  n/a    hitchhiker  0.00000000764485 
 
 
-
 
NC_008699  Noca_0945  response regulator receiver  32.34 
 
 		 216 aa  67.4  0.0000000002  Nocardioides sp. JS614  Bacteria  normal  0.0407172  n/a   
 
 
-
 
NC_010117  COXBURSA331_A0896  LuxR family transcriptional regulator  29.02 
 
 		 214 aa  67.4  0.0000000002  Coxiella burnetii RSA 331  Bacteria  normal  1  n/a   
 
 
-
 
NC_008726  Mvan_5522  two component LuxR family transcriptional regulator  30.99 
 
 		 219 aa  67.4  0.0000000002  Mycobacterium vanbaalenii PYR-1  Bacteria  normal  1  normal  1 
 
 
-
 
NC_008740  Maqu_3089  two component LuxR family transcriptional regulator  25 
 
 		 219 aa  67  0.0000000002  Marinobacter aquaeolei VT8  Bacteria  normal  1  n/a   
 
 
-
 
NC_014210  Ndas_3120  two component transcriptional regulator, LuxR family  33.64 
 
 		 218 aa  67.4  0.0000000002  Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111  Bacteria  normal  0.954631  normal  1 
 
 
-
 
NC_012791  Vapar_0555  two component transcriptional regulator, LuxR family  32.42 
 
 		 227 aa  67  0.0000000002  Variovorax paradoxus S110  Bacteria  normal  0.401942  n/a   
 
 
-
 
NC_014210  Ndas_0346  two component transcriptional regulator, LuxR family  54.1 
 
 		 210 aa  67.4  0.0000000002  Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111  Bacteria  normal  0.0205277  normal  0.823307 
 
 
-
 
NC_010322  PputGB1_1667  two component LuxR family transcriptional regulator  30.11 
 
 		 219 aa  66.6  0.0000000003  Pseudomonas putida GB-1  Bacteria  normal  1  normal  0.869411 
 
 
-
 
NC_007958  RPD_1499  LuxR family two component transcriptional regulator  31.43 
 
 		 209 aa  67  0.0000000003  Rhodopseudomonas palustris BisB5  Bacteria  normal  1  normal  1 
 
 
-
 
NC_008825  Mpe_A3237  response regulator  29.61 
 
 		 219 aa  66.6  0.0000000003  Methylibium petroleiphilum PM1  Bacteria  normal  1  normal  1 
 
 
-
 
NC_009253  Dred_1864  two component LuxR family transcriptional regulator  26.76 
 
 		 205 aa  66.6  0.0000000003  Desulfotomaculum reducens MI-1  Bacteria  normal  1  n/a   
 
 
-
 
NC_009380  Strop_3279  response regulator receiver  33.77 
 
 		 221 aa  66.6  0.0000000003  Salinispora tropica CNB-440  Bacteria  normal  0.97215  normal  1 
 
 
-
 
NC_013422  Hneap_1804  two component transcriptional regulator, LuxR family  28.9 
 
 		 212 aa  66.6  0.0000000003  Halothiobacillus neapolitanus c2  Bacteria  normal  0.023063  n/a   
 
 
-
 
NC_010511  M446_5717  two component LuxR family transcriptional regulator  36.61 
 
 		 220 aa  67  0.0000000003  Methylobacterium sp. 4-46  Bacteria  normal  0.873964  hitchhiker  0.00405289 
 
 
-
 
NC_009523  RoseRS_4323  two component LuxR family transcriptional regulator  32.04 
 
 		 246 aa  66.6  0.0000000003  Roseiflexus sp. RS-1  Bacteria  normal  0.239635  normal  0.317944 
 
 
-
 
NC_013131  Caci_1011  two component transcriptional regulator, LuxR family  30.41 
 
 		 203 aa  66.2  0.0000000004  Catenulispora acidiphila DSM 44928  Bacteria  normal  1  normal  0.109267 
 
 
-
 
NC_003295  RSc2312  two-component response regulator transcription regulator protein  32.5 
 
 		 238 aa  66.2  0.0000000004  Ralstonia solanacearum GMI1000  Bacteria  normal  1  normal  0.500036 
 
 
-
 
NC_009727  CBUD_0998  response regulator  27.68 
 
 		 214 aa  66.2  0.0000000004  Coxiella burnetii Dugway 5J108-111  Bacteria  normal  1  n/a   
 
 
-
 
NC_013173  Dbac_1883  two component transcriptional regulator, LuxR family  27.04 
 
 		 222 aa  66.2  0.0000000004  Desulfomicrobium baculatum DSM 4028  Bacteria  normal  1  n/a   
 
 
-
 
NC_014212  Mesil_0065  two component transcriptional regulator, LuxR family  31.86 
 
 		 204 aa  66.2  0.0000000004  Meiothermus silvanus DSM 9946  Bacteria  normal  1  normal  1 
 
 
-
 
NC_009953  Sare_3511  two component LuxR family transcriptional regulator  33.77 
 
 		 221 aa  66.2  0.0000000004  Salinispora arenicola CNS-205  Bacteria  normal  1  normal  0.0444635 
 
 
-
 
NC_013739  Cwoe_0356  two component transcriptional regulator, LuxR family  32.4 
 
 		 220 aa  66.2  0.0000000004  Conexibacter woesei DSM 14684  Bacteria  normal  0.165726  normal  0.0985551 
 
 
-
 
NC_008782  Ajs_0555  two component LuxR family transcriptional regulator  35.93 
 
 		 232 aa  66.2  0.0000000004  Acidovorax sp. JS42  Bacteria  normal  0.173401  normal  0.808062 
 
 
-
 
NC_010644  Emin_0306  two component LuxR family transcriptional regulator  28.82 
 
 		 215 aa  66.2  0.0000000004  Elusimicrobium minutum Pei191  Bacteria  unclonable  0.000000000161342  hitchhiker  0.00000159266 
 
 
-
 
NC_013501  Rmar_1005  two component transcriptional regulator, LuxR family  33.73 
 
 		 211 aa  66.2  0.0000000004  Rhodothermus marinus DSM 4252  Bacteria  normal  1  n/a   
 
 
-
 
NC_011004  Rpal_1878  two component transcriptional regulator, LuxR family  29.86 
 
 		 208 aa  65.9  0.0000000005  Rhodopseudomonas palustris TIE-1  Bacteria  normal  1  n/a   
 
 
-
 
NC_011725  BCB4264_A2245  DNA-binding response regulator, LuxR family  26.37 
 
 		 213 aa  65.9  0.0000000005  Bacillus cereus B4264  Bacteria  normal  1  n/a   
 
 
-
 
NC_008699  Noca_3120  response regulator receiver  34.5 
 
 		 212 aa  65.9  0.0000000005  Nocardioides sp. JS614  Bacteria  normal  0.230577  n/a   
 
 
-
 
NC_008781  Pnap_0105  two component LuxR family transcriptional regulator  33.14 
 
 		 219 aa  65.9  0.0000000005  Polaromonas naphthalenivorans CJ2  Bacteria  normal  1  normal  0.0920509 
 
 
-
 
NC_002967  TDE2324  DNA-binding response regulator  26.82 
 
 		 217 aa  65.5  0.0000000006  Treponema denticola ATCC 35405  Bacteria  normal  1  n/a   
 
 
-
 
NC_014165  Tbis_0228  LuxR family two component transcriptional regulator  31.98 
 
 		 206 aa  65.5  0.0000000006  Thermobispora bispora DSM 43833  Bacteria  normal  1  normal  1 
 
 
-
 
NC_014151  Cfla_2586  two component transcriptional regulator, LuxR family  34.27 
 
 		 223 aa  65.9  0.0000000006  Cellulomonas flavigena DSM 20109  Bacteria  normal  0.646343  normal  1 
 
 
-
 
NC_008025  Dgeo_0555  two component LuxR family transcriptional regulator  30.9 
 
 		 228 aa  65.5  0.0000000006  Deinococcus geothermalis DSM 11300  Bacteria  normal  1  normal  1 
 
 
-
 
NC_013739  Cwoe_2525  two component transcriptional regulator, LuxR family  39.88 
 
 		 215 aa  65.5  0.0000000006  Conexibacter woesei DSM 14684  Bacteria  normal  1  normal  1 
 
 
-
 
NC_011831  Cagg_0020  two component transcriptional regulator, LuxR family  33.33 
 
 		 229 aa  65.9  0.0000000006  Chloroflexus aggregans DSM 9485  Bacteria  normal  1  normal  1 
 
 
-
 
NC_007952  Bxe_B2471  two component LuxR family transcriptional regulator  33.7 
 
 		 220 aa  65.5  0.0000000007  Burkholderia xenovorans LB400  Bacteria  normal  1  normal  0.55611 
 
 
-
 
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