More than 300 homologs were found in PanDaTox collection
for query gene Dbac_1883 on replicon NC_013173
Organism: Desulfomicrobium baculatum DSM 4028



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_013173  Dbac_1883  two component transcriptional regulator, LuxR family  100 
 
 
222 aa  442  1e-123  Desulfomicrobium baculatum DSM 4028  Bacteria  normal  n/a   
 
 
-
 
NC_013173  Dbac_2015  two component transcriptional regulator, LuxR family  68.4 
 
 
219 aa  299  2e-80  Desulfomicrobium baculatum DSM 4028  Bacteria  normal  n/a   
 
 
-
 
NC_013173  Dbac_1038  two component transcriptional regulator, LuxR family  60.48 
 
 
215 aa  260  1e-68  Desulfomicrobium baculatum DSM 4028  Bacteria  normal  0.942109  n/a   
 
 
-
 
NC_013173  Dbac_1884  two component transcriptional regulator, LuxR family  53.55 
 
 
219 aa  229  2e-59  Desulfomicrobium baculatum DSM 4028  Bacteria  normal  n/a   
 
 
-
 
NC_007519  Dde_0977  two component LuxR family transcriptional regulator  39.8 
 
 
223 aa  159  3e-38  Desulfovibrio desulfuricans subsp. desulfuricans str. G20  Bacteria  decreased coverage  0.00800748  n/a   
 
 
-
 
NC_008554  Sfum_1664  two component LuxR family transcriptional regulator  35.58 
 
 
218 aa  146  3e-34  Syntrophobacter fumaroxidans MPOB  Bacteria  normal  0.49018  normal 
 
 
-
 
NC_013595  Sros_6032  response regulator receiver protein  37.44 
 
 
218 aa  144  1e-33  Streptosporangium roseum DSM 43021  Bacteria  normal  0.53611  normal 
 
 
-
 
NC_011831  Cagg_0340  two component transcriptional regulator, LuxR family  39.62 
 
 
217 aa  144  1e-33  Chloroflexus aggregans DSM 9485  Bacteria  hitchhiker  0.00614189  hitchhiker  0.00317709 
 
 
-
 
NC_007644  Moth_0023  two component LuxR family transcriptional regulator  39.32 
 
 
221 aa  140  9.999999999999999e-33  Moorella thermoacetica ATCC 39073  Bacteria  normal  0.273145  hitchhiker  0.00000136124 
 
 
-
 
NC_011769  DvMF_1021  two component transcriptional regulator, LuxR family  38.24 
 
 
216 aa  140  1.9999999999999998e-32  Desulfovibrio vulgaris str. 'Miyazaki F'  Bacteria  n/a    normal  0.794365 
 
 
-
 
NC_013510  Tcur_0154  two component transcriptional regulator, LuxR family  37.25 
 
 
244 aa  139  3e-32  Thermomonospora curvata DSM 43183  Bacteria  normal  n/a   
 
 
-
 
NC_008146  Mmcs_0590  two component LuxR family transcriptional regulator  36.5 
 
 
215 aa  137  1e-31  Mycobacterium sp. MCS  Bacteria  normal  n/a   
 
 
-
 
NC_008705  Mkms_0603  two component LuxR family transcriptional regulator  36.5 
 
 
215 aa  137  1e-31  Mycobacterium sp. KMS  Bacteria  normal  normal 
 
 
-
 
NC_009077  Mjls_0581  two component LuxR family transcriptional regulator  36.5 
 
 
215 aa  137  1e-31  Mycobacterium sp. JLS  Bacteria  normal  normal 
 
 
-
 
NC_013552  DhcVS_934  DNA-binding response regulator, LuxR family  35 
 
 
232 aa  137  2e-31  Dehalococcoides sp. VS  Bacteria  normal  0.717523  n/a   
 
 
-
 
NC_002939  GSU1293  LuxR family DNA-binding response regulator  34.78 
 
 
216 aa  135  6.0000000000000005e-31  Geobacter sulfurreducens PCA  Bacteria  normal  n/a   
 
 
-
 
NC_002936  DET1063  LuxR family DNA-binding response regulator  34 
 
 
232 aa  133  1.9999999999999998e-30  Dehalococcoides ethenogenes 195  Bacteria  normal  0.815436  n/a   
 
 
-
 
NC_007298  Daro_2343  two component LuxR family transcriptional regulator  38.92 
 
 
211 aa  133  1.9999999999999998e-30  Dechloromonas aromatica RCB  Bacteria  normal  0.999882  normal  0.0841394 
 
 
-
 
NC_007974  Rmet_4715  Two component LuxR family transcriptional regulator  34 
 
 
264 aa  133  1.9999999999999998e-30  Cupriavidus metallidurans CH34  Bacteria  normal  normal 
 
 
-
 
NC_008148  Rxyl_2809  two component LuxR family transcriptional regulator  36.19 
 
 
219 aa  133  1.9999999999999998e-30  Rubrobacter xylanophilus DSM 9941  Bacteria  normal  n/a   
 
 
-
 
NC_013385  Adeg_1034  two component transcriptional regulator, LuxR family  36.55 
 
 
213 aa  133  1.9999999999999998e-30  Ammonifex degensii KC4  Bacteria  normal  n/a   
 
 
-
 
NC_008726  Mvan_1646  two component LuxR family transcriptional regulator  36.04 
 
 
219 aa  133  1.9999999999999998e-30  Mycobacterium vanbaalenii PYR-1  Bacteria  normal  normal  0.92254 
 
 
-
 
NC_009783  VIBHAR_02748  response regulator  33 
 
 
214 aa  133  3e-30  Vibrio harveyi ATCC BAA-1116  Bacteria  n/a    n/a   
 
 
-
 
NC_009483  Gura_2780  two component LuxR family transcriptional regulator  34.95 
 
 
226 aa  132  3e-30  Geobacter uraniireducens Rf4  Bacteria  normal  n/a   
 
 
-
 
NC_009455  DehaBAV1_0945  two component LuxR family transcriptional regulator  34 
 
 
232 aa  132  3.9999999999999996e-30  Dehalococcoides sp. BAV1  Bacteria  normal  n/a   
 
 
-
 
NC_013235  Namu_5079  two component transcriptional regulator, LuxR family  34.01 
 
 
217 aa  132  6e-30  Nakamurella multipartita DSM 44233  Bacteria  normal  normal  0.525358 
 
 
-
 
NC_009012  Cthe_1267  two component LuxR family transcriptional regulator  36.36 
 
 
216 aa  131  6e-30  Clostridium thermocellum ATCC 27405  Bacteria  normal  n/a   
 
 
-
 
NC_008751  Dvul_0670  two component LuxR family transcriptional regulator  35.5 
 
 
216 aa  131  7.999999999999999e-30  Desulfovibrio vulgaris DP4  Bacteria  normal  0.267154  normal 
 
 
-
 
NC_013757  Gobs_2941  two component transcriptional regulator, LuxR family  34.65 
 
 
219 aa  131  1.0000000000000001e-29  Geodermatophilus obscurus DSM 43160  Bacteria  normal  0.911135  n/a   
 
 
-
 
NC_002939  GSU3229  LuxR family DNA-binding response regulator  31.03 
 
 
229 aa  129  2.0000000000000002e-29  Geobacter sulfurreducens PCA  Bacteria  normal  n/a   
 
 
-
 
NC_009253  Dred_2108  two component LuxR family transcriptional regulator  33.8 
 
 
218 aa  130  2.0000000000000002e-29  Desulfotomaculum reducens MI-1  Bacteria  normal  n/a   
 
 
-
 
NC_010571  Oter_1700  two component LuxR family transcriptional regulator  32.5 
 
 
213 aa  129  4.0000000000000003e-29  Opitutus terrae PB90-1  Bacteria  normal  normal  0.226192 
 
 
-
 
NC_007492  Pfl01_3957  two component LuxR family transcriptional regulator  34.15 
 
 
219 aa  129  4.0000000000000003e-29  Pseudomonas fluorescens Pf0-1  Bacteria  normal  normal 
 
 
-
 
NC_009972  Haur_0983  two component LuxR family transcriptional regulator  37.62 
 
 
213 aa  129  5.0000000000000004e-29  Herpetosiphon aurantiacus ATCC 23779  Bacteria  normal  n/a   
 
 
-
 
NC_013235  Namu_2635  two component transcriptional regulator, LuxR family  34.83 
 
 
217 aa  128  6e-29  Nakamurella multipartita DSM 44233  Bacteria  hitchhiker  0.0000528497  hitchhiker  0.00476816 
 
 
-
 
NC_013946  Mrub_0806  two component LuxR family transcriptional regulator  34.88 
 
 
216 aa  127  9.000000000000001e-29  Meiothermus ruber DSM 1279  Bacteria  normal  normal 
 
 
-
 
NC_011071  Smal_1888  two component transcriptional regulator, LuxR family  35.78 
 
 
212 aa  127  9.000000000000001e-29  Stenotrophomonas maltophilia R551-3  Bacteria  normal  normal  0.265772 
 
 
-
 
NC_012918  GM21_0467  two component transcriptional regulator, LuxR family  34.15 
 
 
216 aa  127  1.0000000000000001e-28  Geobacter sp. M21  Bacteria  n/a    hitchhiker  0.000507383 
 
 
-
 
NC_011146  Gbem_0451  two component transcriptional regulator, LuxR family  34.15 
 
 
216 aa  127  1.0000000000000001e-28  Geobacter bemidjiensis Bem  Bacteria  normal  n/a   
 
 
-
 
NC_008009  Acid345_1691  two component LuxR family transcriptional regulator  37.38 
 
 
208 aa  127  1.0000000000000001e-28  Candidatus Koribacter versatilis Ellin345  Bacteria  normal  normal  0.0637899 
 
 
-
 
NC_014165  Tbis_3390  LuxR family two component transcriptional regulator  37.56 
 
 
228 aa  127  1.0000000000000001e-28  Thermobispora bispora DSM 43833  Bacteria  normal  0.269937  normal 
 
 
-
 
NC_011830  Dhaf_1230  two component transcriptional regulator, LuxR family  36.32 
 
 
215 aa  127  2.0000000000000002e-28  Desulfitobacterium hafniense DCB-2  Bacteria  normal  n/a   
 
 
-
 
NC_013595  Sros_0553  response regulator receiver protein  35.75 
 
 
213 aa  127  2.0000000000000002e-28  Streptosporangium roseum DSM 43021  Bacteria  normal  0.82888  normal 
 
 
-
 
NC_003295  RSc2312  two-component response regulator transcription regulator protein  36.27 
 
 
238 aa  126  2.0000000000000002e-28  Ralstonia solanacearum GMI1000  Bacteria  normal  normal  0.500036 
 
 
-
 
NC_009921  Franean1_5512  two component LuxR family transcriptional regulator  37.56 
 
 
250 aa  126  2.0000000000000002e-28  Frankia sp. EAN1pec  Bacteria  normal  normal  0.631776 
 
 
-
 
NC_013595  Sros_1910  response regulator receiver protein  34.5 
 
 
226 aa  126  2.0000000000000002e-28  Streptosporangium roseum DSM 43021  Bacteria  normal  0.238062  normal  0.36963 
 
 
-
 
NC_009457  VC0395_A0833  response regulator  31.5 
 
 
227 aa  127  2.0000000000000002e-28  Vibrio cholerae O395  Bacteria  hitchhiker  0.0000189156  n/a   
 
 
-
 
NC_013205  Aaci_0516  two component transcriptional regulator, LuxR family  35.32 
 
 
231 aa  126  2.0000000000000002e-28  Alicyclobacillus acidocaldarius subsp. acidocaldarius DSM 446  Bacteria  normal  n/a   
 
 
-
 
NC_007413  Ava_2028  two component LuxR family transcriptional regulator  37.76 
 
 
219 aa  126  3e-28  Anabaena variabilis ATCC 29413  Bacteria  normal  0.515359  normal 
 
 
-
 
NC_009664  Krad_3810  two component transcriptional regulator, LuxR family  35.82 
 
 
236 aa  125  4.0000000000000003e-28  Kineococcus radiotolerans SRS30216  Bacteria  normal  0.225059  normal  0.0261757 
 
 
-
 
NC_013525  Tter_1109  two component transcriptional regulator, LuxR family  39.6 
 
 
218 aa  125  4.0000000000000003e-28  Thermobaculum terrenum ATCC BAA-798  Bacteria  n/a    n/a   
 
 
-
 
NC_010625  Bphy_6558  two component LuxR family transcriptional regulator  33.83 
 
 
210 aa  125  5e-28  Burkholderia phymatum STM815  Bacteria  normal  normal  0.458284 
 
 
-
 
NC_011662  Tmz1t_1311  two component transcriptional regulator, LuxR family  34.95 
 
 
226 aa  125  5e-28  Thauera sp. MZ1T  Bacteria  normal  0.165019  n/a   
 
 
-
 
NC_007519  Dde_2674  two component LuxR family transcriptional regulator  32.13 
 
 
215 aa  125  6e-28  Desulfovibrio desulfuricans subsp. desulfuricans str. G20  Bacteria  normal  0.721789  n/a   
 
 
-
 
NC_009972  Haur_3654  two component LuxR family transcriptional regulator  34.91 
 
 
221 aa  125  6e-28  Herpetosiphon aurantiacus ATCC 23779  Bacteria  hitchhiker  0.0000210563  n/a   
 
 
-
 
NC_014212  Mesil_2510  two component transcriptional regulator, LuxR family  34.72 
 
 
217 aa  125  7e-28  Meiothermus silvanus DSM 9946  Bacteria  normal  normal 
 
 
-
 
NC_013947  Snas_5595  two component transcriptional regulator, LuxR family  31.66 
 
 
215 aa  125  7e-28  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  normal 
 
 
-
 
NC_014210  Ndas_1972  two component transcriptional regulator, LuxR family  34.93 
 
 
217 aa  124  9e-28  Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111  Bacteria  unclonable  0.0000000794288  unclonable  0.0000000332591 
 
 
-
 
NC_014210  Ndas_0782  two component transcriptional regulator, LuxR family  33.17 
 
 
220 aa  124  1e-27  Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111  Bacteria  normal  normal 
 
 
-
 
NC_013159  Svir_38420  response regulator containing a CheY-like receiver domain protein and an HTH DNA-binding domain protein  36.59 
 
 
226 aa  124  1e-27  Saccharomonospora viridis DSM 43017  Bacteria  normal  normal 
 
 
-
 
NC_007908  Rfer_0894  two component LuxR family transcriptional regulator  33.65 
 
 
217 aa  124  1e-27  Rhodoferax ferrireducens T118  Bacteria  normal  n/a   
 
 
-
 
NC_013131  Caci_7658  two component transcriptional regulator, LuxR family  31 
 
 
219 aa  124  1e-27  Catenulispora acidiphila DSM 44928  Bacteria  normal  normal 
 
 
-
 
NC_010676  Bphyt_6235  two component transcriptional regulator, LuxR family  34 
 
 
210 aa  124  1e-27  Burkholderia phytofirmans PsJN  Bacteria  normal  normal  0.612124 
 
 
-
 
NC_013235  Namu_0480  two component transcriptional regulator, LuxR family  33.5 
 
 
214 aa  124  1e-27  Nakamurella multipartita DSM 44233  Bacteria  normal  normal 
 
 
-
 
NC_013411  GYMC61_3240  two component transcriptional regulator, LuxR family  30.92 
 
 
224 aa  123  2e-27  Geobacillus sp. Y412MC61  Bacteria  n/a    n/a   
 
 
-
 
NC_008255  CHU_1317  response regulator  31.9 
 
 
220 aa  123  2e-27  Cytophaga hutchinsonii ATCC 33406  Bacteria  normal  0.500574  normal  0.0503905 
 
 
-
 
NC_013947  Snas_2469  two component transcriptional regulator, LuxR family  36.36 
 
 
214 aa  123  2e-27  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  0.126163  normal 
 
 
-
 
NC_011772  BCG9842_B3849  DNA-binding response regulator  34.74 
 
 
210 aa  123  2e-27  Bacillus cereus G9842  Bacteria  decreased coverage  0.0000000308683  hitchhiker  0.000000000350245 
 
 
-
 
NC_009674  Bcer98_1160  two component LuxR family transcriptional regulator  34.74 
 
 
210 aa  122  3e-27  Bacillus cytotoxicus NVH 391-98  Bacteria  normal  n/a   
 
 
-
 
NC_007777  Francci3_1039  two component LuxR family transcriptional regulator  36.63 
 
 
238 aa  123  3e-27  Frankia sp. CcI3  Bacteria  normal  normal  0.135118 
 
 
-
 
NC_010571  Oter_1551  two component LuxR family transcriptional regulator  33.8 
 
 
229 aa  122  3e-27  Opitutus terrae PB90-1  Bacteria  normal  normal  0.460798 
 
 
-
 
NC_011725  BCB4264_A1495  DNA-binding response regulator  34.74 
 
 
210 aa  122  3e-27  Bacillus cereus B4264  Bacteria  unclonable  0.0000174821  n/a   
 
 
-
 
NC_009675  Anae109_1385  two component LuxR family transcriptional regulator  30.88 
 
 
212 aa  122  4e-27  Anaeromyxobacter sp. Fw109-5  Bacteria  normal  normal 
 
 
-
 
NC_007520  Tcr_1382  two component LuxR family transcriptional regulator  35.21 
 
 
232 aa  122  4e-27  Thiomicrospira crunogena XCL-2  Bacteria  normal  n/a   
 
 
-
 
NC_013510  Tcur_1532  two component transcriptional regulator, LuxR family  36.08 
 
 
220 aa  122  4e-27  Thermomonospora curvata DSM 43183  Bacteria  normal  0.0114765  n/a   
 
 
-
 
NC_011658  BCAH187_A1601  DNA-binding response regulator  34.27 
 
 
210 aa  122  5e-27  Bacillus cereus AH187  Bacteria  unclonable  0.00000000136266  n/a   
 
 
-
 
NC_003909  BCE_1563  DNA-binding response regulator  34.27 
 
 
210 aa  122  5e-27  Bacillus cereus ATCC 10987  Bacteria  hitchhiker  0.0000000942452  n/a   
 
 
-
 
NC_005945  BAS1348  DNA-binding response regulator  34.27 
 
 
210 aa  122  5e-27  Bacillus anthracis str. Sterne  Bacteria  hitchhiker  0.0000440829  n/a   
 
 
-
 
NC_005957  BT9727_1322  response regulator  34.27 
 
 
210 aa  122  5e-27  Bacillus thuringiensis serovar konkukian str. 97-27  Bacteria  decreased coverage  7.30192e-17  n/a   
 
 
-
 
NC_007530  GBAA_1457  DNA-binding response regulator  34.27 
 
 
210 aa  122  5e-27  Bacillus anthracis str. 'Ames Ancestor'  Bacteria  hitchhiker  0.0000538049  n/a   
 
 
-
 
NC_010184  BcerKBAB4_1363  two component LuxR family transcriptional regulator  34.27 
 
 
210 aa  122  5e-27  Bacillus weihenstephanensis KBAB4  Bacteria  hitchhiker  0.0039551  n/a   
 
 
-
 
NC_011898  Ccel_1863  two component transcriptional regulator, LuxR family  31.28 
 
 
216 aa  122  6e-27  Clostridium cellulolyticum H10  Bacteria  hitchhiker  0.00000548978  n/a   
 
 
-
 
NC_010627  Bphy_7764  two component LuxR family transcriptional regulator  32.34 
 
 
210 aa  121  7e-27  Burkholderia phymatum STM815  Bacteria  normal  0.527093  normal 
 
 
-
 
NC_013595  Sros_1417  response regulator receiver protein  34.5 
 
 
234 aa  121  7e-27  Streptosporangium roseum DSM 43021  Bacteria  normal  normal  0.0224272 
 
 
-
 
NC_011726  PCC8801_1927  two component transcriptional regulator, LuxR family  37.44 
 
 
221 aa  121  8e-27  Cyanothece sp. PCC 8801  Bacteria  n/a    n/a   
 
 
-
 
NC_013161  Cyan8802_1954  two component transcriptional regulator, LuxR family  37.44 
 
 
221 aa  121  8e-27  Cyanothece sp. PCC 8802  Bacteria  normal  normal  0.682063 
 
 
-
 
NC_011830  Dhaf_1194  two component transcriptional regulator, LuxR family  34.45 
 
 
217 aa  121  8e-27  Desulfitobacterium hafniense DCB-2  Bacteria  normal  0.272513  n/a   
 
 
-
 
NC_008578  Acel_0973  two component LuxR family transcriptional regulator  36.36 
 
 
216 aa  121  8e-27  Acidothermus cellulolyticus 11B  Bacteria  normal  0.255067  normal  0.404517 
 
 
-
 
NC_006274  BCZK1321  response regulator  34.27 
 
 
210 aa  121  9e-27  Bacillus cereus E33L  Bacteria  hitchhiker  0.00000332221  n/a   
 
 
-
 
NC_013595  Sros_8243  response regulator receiver protein  35.61 
 
 
217 aa  120  9.999999999999999e-27  Streptosporangium roseum DSM 43021  Bacteria  normal  0.931194  normal  0.230681 
 
 
-
 
NC_008699  Noca_1020  response regulator receiver  32.84 
 
 
218 aa  121  9.999999999999999e-27  Nocardioides sp. JS614  Bacteria  normal  0.648692  n/a   
 
 
-
 
NC_013204  Elen_1743  two component transcriptional regulator, LuxR family  35.15 
 
 
214 aa  120  9.999999999999999e-27  Eggerthella lenta DSM 2243  Bacteria  normal  0.370009  normal  0.039988 
 
 
-
 
NC_009972  Haur_1104  two component LuxR family transcriptional regulator  36.32 
 
 
218 aa  120  9.999999999999999e-27  Herpetosiphon aurantiacus ATCC 23779  Bacteria  normal  0.348687  n/a   
 
 
-
 
NC_012793  GWCH70_3043  two component transcriptional regulator, LuxR family  32.69 
 
 
225 aa  120  9.999999999999999e-27  Geobacillus sp. WCH70  Bacteria  decreased coverage  0.0000000652561  n/a   
 
 
-
 
NC_013411  GYMC61_1316  two component transcriptional regulator, LuxR family  35.03 
 
 
210 aa  120  1.9999999999999998e-26  Geobacillus sp. Y412MC61  Bacteria  n/a    n/a   
 
 
-
 
NC_012912  Dd1591_1518  response regulator  34.16 
 
 
220 aa  120  1.9999999999999998e-26  Dickeya zeae Ech1591  Bacteria  normal  0.121615  n/a   
 
 
-
 
NC_007005  Psyr_3299  LuxR response regulator receiver  32.04 
 
 
220 aa  120  1.9999999999999998e-26  Pseudomonas syringae pv. syringae B728a  Bacteria  normal  0.0158345  normal 
 
 
-
 
NC_007760  Adeh_1997  two component LuxR family transcriptional regulator  32.85 
 
 
218 aa  120  1.9999999999999998e-26  Anaeromyxobacter dehalogenans 2CP-C  Bacteria  normal  n/a   
 
 
-
 
NC_011773  BCAH820_1531  DNA-binding response regulator  33.8 
 
 
210 aa  120  1.9999999999999998e-26  Bacillus cereus AH820  Bacteria  n/a    hitchhiker  8.64189e-24 
 
 
-
 
NC_013510  Tcur_4038  two component transcriptional regulator, LuxR family  37 
 
 
253 aa  120  1.9999999999999998e-26  Thermomonospora curvata DSM 43183  Bacteria  normal  n/a   
 
 
-
 
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