| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Vapar_4377 |
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| Symbol | |
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| ID | 7974051 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Variovorax paradoxus S110 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012791 |
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| Strand | - |
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| Start bp | 4623863 |
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| End bp | 4624576 |
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| Gene Length | 714 bp |
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| Protein Length | 237 aa |
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| Translation table | 11 |
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| GC content | 70% |
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| IMG OID | 644794966 |
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| Product | two component transcriptional regulator, LuxR family |
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| Protein accession | YP_002946254 |
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| Protein GI | 239817344 |
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| COG category | [K] Transcription
[T] Signal transduction mechanisms |
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| COG ID | [COG2197] Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 0.237342 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GTGCCTTCGC TCGAATCTTC CTCCAAACCG CCGCCGCCGA CCCTGGAGGG CGGCATCCCC
GCGCACTCGC CCGGCGCGAT CCTGGTGGTG GACGACCACG ACTTGCTGCG GCTCGGCGTG
CGTGCGCTGA TCGAGGCGCA GACCGCTTCC TCGGGGGCGA GCATCGAGGT CTTCGAGGCC
GCCAGTGCGG CCGAGGCGCT GGCGCTGTAC GACAGGCACT GCGAGTCGAT CCGCCTGGTG
CTGCTGGATC TGGCGCTGCC CGACACCCAC GGCCTGAGCG GCCTCGCGGA ATTCCGCCTG
CGCCACCCGT CCGCCCGCAT CGTGGTGCTG TCGGGCACCG GCAACACCTC GCTGGCGCAG
GGCGCGGTGG CGCTGGGCGC GAGCGCCTTT CTTCCGAAGT CGGCGGACCT GAAGGAGGTG
GTGGGATTCA TCCGCGCCTG CGGCCTGCTC GAGCCCGGCG CGCCTGAAGT TCCCCCTTCC
GCCGCCATGC CGAAGACGCC CGGCGGCTAC GCCGAATCGG CCCGGGCCAG CGCCTGGCAG
GAGCTCACGC CGCGCCAGAT GCAGGTGTTG CAATGGGTGC TCGACGGCAA GGCGAACAAG
GAGATCGCCC AGCTCGCGAA CCTGAGCGAA GGCACGGTGA AGAACCACGT ATCGACCATC
CTGCTGCTGT TCGGCGTGCG TTCGCGTGCG CAGCTGATCA GCAGCCTGCG TTGA
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| Protein sequence | MPSLESSSKP PPPTLEGGIP AHSPGAILVV DDHDLLRLGV RALIEAQTAS SGASIEVFEA
ASAAEALALY DRHCESIRLV LLDLALPDTH GLSGLAEFRL RHPSARIVVL SGTGNTSLAQ
GAVALGASAF LPKSADLKEV VGFIRACGLL EPGAPEVPPS AAMPKTPGGY AESARASAWQ
ELTPRQMQVL QWVLDGKANK EIAQLANLSE GTVKNHVSTI LLLFGVRSRA QLISSLR
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