More than 300 homologs were found in PanDaTox collection
for query gene Bxe_B2819 on replicon NC_007952
Organism: Burkholderia xenovorans LB400



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_007952  Bxe_B2819  GntR family transcriptional regulator  100 
 
 
467 aa  922    Burkholderia xenovorans LB400  Bacteria  normal  normal 
 
 
-
 
NC_012880  Dd703_0385  transcriptional regulator, GntR family with aminotransferase domain  39.05 
 
 
452 aa  281  1e-74  Dickeya dadantii Ech703  Bacteria  normal  0.577938  n/a   
 
 
-
 
NC_011368  Rleg2_5225  transcriptional regulator, GntR family with aminotransferase domain  38.78 
 
 
441 aa  268  2e-70  Rhizobium leguminosarum bv. trifolii WSM2304  Bacteria  normal  normal  0.260155 
 
 
-
 
NC_008254  Meso_0044  GntR family transcriptional regulator  37.88 
 
 
445 aa  261  2e-68  Chelativorans sp. BNC1  Bacteria  normal  n/a   
 
 
-
 
NC_012848  Rleg_5410  transcriptional regulator, GntR family with aminotransferase domain  38.98 
 
 
441 aa  256  8e-67  Rhizobium leguminosarum bv. trifolii WSM1325  Bacteria  normal  normal 
 
 
-
 
NC_007951  Bxe_A1472  GntR family transcriptional regulator  34.66 
 
 
449 aa  225  1e-57  Burkholderia xenovorans LB400  Bacteria  normal  normal  0.240551 
 
 
-
 
NC_014158  Tpau_0837  transcriptional regulator, GntR family with aminotransferase domain  36.52 
 
 
462 aa  208  1e-52  Tsukamurella paurometabola DSM 20162  Bacteria  normal  0.439147  n/a   
 
 
-
 
NC_014151  Cfla_1430  transcriptional regulator, GntR family with aminotransferase domain  37.9 
 
 
446 aa  203  5e-51  Cellulomonas flavigena DSM 20109  Bacteria  normal  0.0746057  normal 
 
 
-
 
NC_013521  Sked_24220  transcriptional regulator with HTH domain and aminotransferase domain  35.19 
 
 
448 aa  186  9e-46  Sanguibacter keddieii DSM 10542  Bacteria  normal  normal 
 
 
-
 
NC_010816  BLD_1418  putative transcriptional regulator  32.68 
 
 
532 aa  171  2e-41  Bifidobacterium longum DJO10A  Bacteria  normal  n/a   
 
 
-
 
NC_013947  Snas_4186  transcriptional regulator, GntR family with aminotransferase domain-containing protein  32.13 
 
 
436 aa  153  5.9999999999999996e-36  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  0.710263  normal  0.0862967 
 
 
-
 
NC_011071  Smal_2382  transcriptional regulator, GntR family with aminotransferase domain  34.19 
 
 
428 aa  137  6.0000000000000005e-31  Stenotrophomonas maltophilia R551-3  Bacteria  normal  0.268016  normal 
 
 
-
 
NC_013124  Afer_0940  transcriptional regulator, GntR family with aminotransferase domain  33 
 
 
462 aa  130  6e-29  Acidimicrobium ferrooxidans DSM 10331  Bacteria  normal  0.0465159  n/a   
 
 
-
 
NC_007974  Rmet_4117  transcriptional regulator with aminotransferase and DNA binding domains (possibly involved in vitB6 biosynthesis)  30.65 
 
 
431 aa  125  1e-27  Cupriavidus metallidurans CH34  Bacteria  normal  normal 
 
 
-
 
NC_011083  SeHA_C2696  GntR family transcriptional regulator  29.43 
 
 
430 aa  114  5e-24  Salmonella enterica subsp. enterica serovar Heidelberg str. SL476  Bacteria  normal  normal 
 
 
-
 
NC_013172  Bfae_00360  transcriptional regulator with HTH domain and aminotransferase domain  31.14 
 
 
455 aa  111  2.0000000000000002e-23  Brachybacterium faecium DSM 4810  Bacteria  normal  n/a   
 
 
-
 
NC_011149  SeAg_B2581  GntR-family transcriptional regulator  29.23 
 
 
430 aa  110  5e-23  Salmonella enterica subsp. enterica serovar Agona str. SL483  Bacteria  normal  n/a   
 
 
-
 
NC_011094  SeSA_A2672  GntR-family transcriptional regulator  29.02 
 
 
430 aa  110  7.000000000000001e-23  Salmonella enterica subsp. enterica serovar Schwarzengrund str. CVM19633  Bacteria  normal  0.562569  normal 
 
 
-
 
NC_011205  SeD_A2802  GntR family transcriptional regulator  29.09 
 
 
430 aa  110  7.000000000000001e-23  Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853  Bacteria  normal  normal 
 
 
-
 
NC_011080  SNSL254_A2630  GntR family transcriptional regulator  28.95 
 
 
430 aa  110  7.000000000000001e-23  Salmonella enterica subsp. enterica serovar Newport str. SL254  Bacteria  normal  0.0520726  normal 
 
 
-
 
NC_008752  Aave_0017  GntR family transcriptional regulator  32.7 
 
 
442 aa  109  9.000000000000001e-23  Acidovorax citrulli AAC00-1  Bacteria  normal  normal 
 
 
-
 
NC_013131  Caci_1566  transcriptional regulator, GntR family with aminotransferase domain  30.63 
 
 
444 aa  107  5e-22  Catenulispora acidiphila DSM 44928  Bacteria  normal  normal  0.487946 
 
 
-
 
NC_009425  Ent638_4213  GntR family transcriptional regulator  26.73 
 
 
432 aa  106  8e-22  Enterobacter sp. 638  Bacteria  normal  0.0990086  normal 
 
 
-
 
NC_009832  Spro_2563  transcriptional regulator  28.96 
 
 
434 aa  104  3e-21  Serratia proteamaculans 568  Bacteria  normal  normal 
 
 
-
 
NC_008782  Ajs_4162  GntR family transcriptional regulator  31.84 
 
 
442 aa  99.4  1e-19  Acidovorax sp. JS42  Bacteria  normal  normal 
 
 
-
 
NC_011992  Dtpsy_0018  transcriptional regulator, GntR family with aminotransferase domain  32.37 
 
 
442 aa  97.1  6e-19  Acidovorax ebreus TPSY  Bacteria  normal  0.316764  n/a   
 
 
-
 
NC_009719  Plav_2133  GntR family transcriptional regulator  25.06 
 
 
476 aa  85.9  0.000000000000001  Parvibaculum lavamentivorans DS-1  Bacteria  normal  normal 
 
 
-
 
NC_008686  Pden_0279  GntR family transcriptional regulator  26.77 
 
 
461 aa  82.8  0.00000000000001  Paracoccus denitrificans PD1222  Bacteria  normal  normal 
 
 
-
 
NC_010557  BamMC406_5773  transcriptional regulator  27.27 
 
 
470 aa  78.6  0.0000000000002  Burkholderia ambifaria MC40-6  Bacteria  normal  0.272956  normal 
 
 
-
 
NC_013739  Cwoe_1217  transcriptional regulator, GntR family with aminotransferase domain  30.5 
 
 
466 aa  79  0.0000000000002  Conexibacter woesei DSM 14684  Bacteria  normal  normal  0.217148 
 
 
-
 
NC_012793  GWCH70_1451  transcriptional regulator, GntR family with aminotransferase domain  21.22 
 
 
490 aa  79  0.0000000000002  Geobacillus sp. WCH70  Bacteria  normal  n/a   
 
 
-
 
NC_008392  Bamb_6017  GntR family transcriptional regulator  27.27 
 
 
470 aa  78.2  0.0000000000003  Burkholderia ambifaria AMMD  Bacteria  normal  0.488047  normal 
 
 
-
 
NC_007963  Csal_2733  GntR family transcriptional regulator  28.02 
 
 
467 aa  77  0.0000000000007  Chromohalobacter salexigens DSM 3043  Bacteria  normal  n/a   
 
 
-
 
NC_002947  PP_0486  GntR family transcriptional regulator  26.89 
 
 
474 aa  76.6  0.0000000000008  Pseudomonas putida KT2440  Bacteria  normal  normal  0.0484515 
 
 
-
 
NC_012791  Vapar_0563  transcriptional regulator, GntR family with aminotransferase domain  27.23 
 
 
465 aa  76.6  0.0000000000008  Variovorax paradoxus S110  Bacteria  normal  n/a   
 
 
-
 
NC_010087  Bmul_6146  transcriptional regulator  26.22 
 
 
470 aa  76.6  0.0000000000009  Burkholderia multivorans ATCC 17616  Bacteria  normal  normal 
 
 
-
 
NC_009656  PSPA7_4375  GntR family transcriptional regulator  26.39 
 
 
464 aa  75.9  0.000000000001  Pseudomonas aeruginosa PA7  Bacteria  normal  n/a   
 
 
-
 
NC_010320  Teth514_2175  GntR family transcriptional regulator  23.2 
 
 
477 aa  75.9  0.000000000001  Thermoanaerobacter sp. X514  Bacteria  normal  n/a   
 
 
-
 
NC_008781  Pnap_2629  GntR family transcriptional regulator  26.3 
 
 
463 aa  75.9  0.000000000002  Polaromonas naphthalenivorans CJ2  Bacteria  normal  normal 
 
 
-
 
NC_009512  Pput_0519  GntR family transcriptional regulator  26.95 
 
 
460 aa  74.7  0.000000000003  Pseudomonas putida F1  Bacteria  normal  normal  0.481515 
 
 
-
 
NC_009485  BBta_6780  GntR family transcriptional regulator  29.89 
 
 
469 aa  74.7  0.000000000003  Bradyrhizobium sp. BTAi1  Bacteria  normal  0.549939  normal  0.132463 
 
 
-
 
NC_007925  RPC_2019  GntR family transcriptional regulator  25.11 
 
 
486 aa  74.7  0.000000000003  Rhodopseudomonas palustris BisB18  Bacteria  normal  normal  0.437741 
 
 
-
 
NC_009483  Gura_2450  GntR family transcriptional regulator  24.36 
 
 
469 aa  74.7  0.000000000004  Geobacter uraniireducens Rf4  Bacteria  decreased coverage  0.00121397  n/a   
 
 
-
 
NC_011898  Ccel_1857  transcriptional regulator, GntR family with aminotransferase domain  22.91 
 
 
468 aa  73.6  0.000000000008  Clostridium cellulolyticum H10  Bacteria  normal  n/a   
 
 
-
 
NC_009620  Smed_3701  GntR family transcriptional regulator  27.75 
 
 
478 aa  73.2  0.000000000009  Sinorhizobium medicae WSM419  Bacteria  normal  normal 
 
 
-
 
NC_011658  BCAH187_A0345  transcriptional regulator, GntR family  23.78 
 
 
470 aa  73.2  0.000000000009  Bacillus cereus AH187  Bacteria  normal  0.469578  n/a   
 
 
-
 
NC_007947  Mfla_1892  GntR family transcriptional regulator  23.73 
 
 
477 aa  73.2  0.00000000001  Methylobacillus flagellatus KT  Bacteria  normal  normal 
 
 
-
 
NC_009668  Oant_3492  GntR family transcriptional regulator  27.39 
 
 
473 aa  71.6  0.00000000002  Ochrobactrum anthropi ATCC 49188  Bacteria  normal  0.249903  n/a   
 
 
-
 
NC_010506  Swoo_1939  transcriptional regulator  22.77 
 
 
476 aa  72  0.00000000002  Shewanella woodyi ATCC 51908  Bacteria  normal  0.0234327  normal  0.0215976 
 
 
-
 
NC_010501  PputW619_0539  transcriptional regulator  26.83 
 
 
462 aa  72.4  0.00000000002  Pseudomonas putida W619  Bacteria  normal  normal  0.0353345 
 
 
-
 
NC_011312  VSAL_I1306  putative HTH-type trancriptional regulator, GntR family  22.62 
 
 
446 aa  72  0.00000000002  Aliivibrio salmonicida LFI1238  Bacteria  normal  0.734577  n/a   
 
 
-
 
NC_009439  Pmen_2701  GntR family transcriptional regulator  27.15 
 
 
502 aa  72.4  0.00000000002  Pseudomonas mendocina ymp  Bacteria  normal  0.193287  normal  0.0380236 
 
 
-
 
NC_013457  VEA_000631  transcriptional regulator GntR family threonine metabolism  23.95 
 
 
477 aa  71.6  0.00000000003  Vibrio sp. Ex25  Bacteria  normal  n/a   
 
 
-
 
NC_011146  Gbem_0803  transcriptional regulator, GntR family with aminotransferase domain  23.91 
 
 
480 aa  71.2  0.00000000004  Geobacter bemidjiensis Bem  Bacteria  normal  0.284256  n/a   
 
 
-
 
NC_010002  Daci_3668  transcriptional regulator  28.53 
 
 
509 aa  71.2  0.00000000004  Delftia acidovorans SPH-1  Bacteria  normal  0.22591  normal  0.0459269 
 
 
-
 
NC_012848  Rleg_5234  transcriptional regulator, GntR family with aminotransferase domain  25.37 
 
 
461 aa  70.9  0.00000000005  Rhizobium leguminosarum bv. trifolii WSM1325  Bacteria  normal  normal  0.214132 
 
 
-
 
NC_011368  Rleg2_5513  transcriptional regulator, GntR family with aminotransferase domain  25.06 
 
 
461 aa  70.1  0.00000000007  Rhizobium leguminosarum bv. trifolii WSM2304  Bacteria  normal  0.412768  decreased coverage  0.00050533 
 
 
-
 
NC_008781  Pnap_2106  GntR family transcriptional regulator  26.01 
 
 
462 aa  70.5  0.00000000007  Polaromonas naphthalenivorans CJ2  Bacteria  normal  0.0493633  normal  0.356375 
 
 
-
 
NC_009952  Dshi_0609  transcriptional regulator, GntR family with aminotransferase domain  26.2 
 
 
514 aa  70.5  0.00000000007  Dinoroseobacter shibae DFL 12  Bacteria  normal  normal 
 
 
-
 
NC_013421  Pecwa_1173  transcriptional regulator, GntR family with aminotransferase domain protein  24.69 
 
 
486 aa  70.5  0.00000000007  Pectobacterium wasabiae WPP163  Bacteria  normal  0.914694  n/a   
 
 
-
 
NC_007498  Pcar_1599  GntR family transcriptional regulator  21.89 
 
 
475 aa  70.1  0.00000000008  Pelobacter carbinolicus DSM 2380  Bacteria  normal  n/a   
 
 
-
 
NC_011772  BCG9842_B2543  transcriptional regulator, GntR family  20.91 
 
 
477 aa  70.1  0.00000000008  Bacillus cereus G9842  Bacteria  normal  hitchhiker  0.0000000100804 
 
 
-
 
NC_008062  Bcen_5806  GntR family transcriptional regulator  26.75 
 
 
470 aa  70.1  0.00000000008  Burkholderia cenocepacia AU 1054  Bacteria  normal  n/a   
 
 
-
 
NC_008544  Bcen2424_6170  GntR family transcriptional regulator  26.75 
 
 
470 aa  70.1  0.00000000008  Burkholderia cenocepacia HI2424  Bacteria  normal  0.590476  normal 
 
 
-
 
NC_009656  PSPA7_2257  putative transcriptional regulator  25.65 
 
 
479 aa  70.1  0.00000000009  Pseudomonas aeruginosa PA7  Bacteria  normal  n/a   
 
 
-
 
NC_008463  PA14_26590  GntR family transcriptional regulator  25.65 
 
 
479 aa  70.1  0.00000000009  Pseudomonas aeruginosa UCBPP-PA14  Bacteria  normal  0.079349  normal 
 
 
-
 
NC_011368  Rleg2_5181  transcriptional regulator, GntR family with aminotransferase domain  27.14 
 
 
447 aa  69.7  0.0000000001  Rhizobium leguminosarum bv. trifolii WSM2304  Bacteria  normal  normal 
 
 
-
 
NC_010512  Bcenmc03_6651  transcriptional regulator  26.75 
 
 
470 aa  69.7  0.0000000001  Burkholderia cenocepacia MC0-3  Bacteria  normal  0.441186  normal 
 
 
-
 
NC_008825  Mpe_A3480  GntR family transcriptional regulator  28.57 
 
 
481 aa  69.7  0.0000000001  Methylibium petroleiphilum PM1  Bacteria  normal  0.324042  normal 
 
 
-
 
NC_005945  BAS1938  GntR family transcriptional regulator  23.6 
 
 
466 aa  68.9  0.0000000002  Bacillus anthracis str. Sterne  Bacteria  normal  0.363116  n/a   
 
 
-
 
NC_011830  Dhaf_1076  transcriptional regulator, GntR family with aminotransferase domain  22.25 
 
 
472 aa  68.6  0.0000000002  Desulfitobacterium hafniense DCB-2  Bacteria  hitchhiker  0.000000000000690216  n/a   
 
 
-
 
NC_007530  GBAA_2085  GntR family transcriptional regulator  23.6 
 
 
466 aa  68.9  0.0000000002  Bacillus anthracis str. 'Ames Ancestor'  Bacteria  normal  0.249037  n/a   
 
 
-
 
NC_011725  BCB4264_A2749  transcriptional regulator, GntR family  21.49 
 
 
477 aa  68.6  0.0000000002  Bacillus cereus B4264  Bacteria  normal  n/a   
 
 
-
 
NC_007912  Sde_3059  GntR family transcriptional regulator  25.5 
 
 
473 aa  68.9  0.0000000002  Saccharophagus degradans 2-40  Bacteria  normal  0.0865812  hitchhiker  0.000973023 
 
 
-
 
NC_011773  BCAH820_2116  transcriptional regulator, GntR family  23.31 
 
 
466 aa  68.6  0.0000000002  Bacillus cereus AH820  Bacteria  n/a    normal 
 
 
-
 
NC_007974  Rmet_4318  GntR family transcriptional regulator  27.55 
 
 
504 aa  68.9  0.0000000002  Cupriavidus metallidurans CH34  Bacteria  normal  0.632192  normal 
 
 
-
 
NC_008044  TM1040_2167  GntR family transcriptional regulator  26.39 
 
 
465 aa  68.9  0.0000000002  Ruegeria sp. TM1040  Bacteria  normal  normal  0.786725 
 
 
-
 
NC_009429  Rsph17025_3169  hypothetical protein  26.2 
 
 
461 aa  68.2  0.0000000003  Rhodobacter sphaeroides ATCC 17025  Bacteria  normal  normal 
 
 
-
 
NC_009674  Bcer98_1567  GntR family transcriptional regulator  23.9 
 
 
473 aa  68.2  0.0000000003  Bacillus cytotoxicus NVH 391-98  Bacteria  normal  n/a   
 
 
-
 
NC_010681  Bphyt_1108  transcriptional regulator, GntR family with aminotransferase domain  26.69 
 
 
471 aa  68.6  0.0000000003  Burkholderia phytofirmans PsJN  Bacteria  normal  normal 
 
 
-
 
NC_011758  Mchl_5391  transcriptional regulator, GntR family with aminotransferase domain  27.55 
 
 
481 aa  68.2  0.0000000003  Methylobacterium chloromethanicum CM4  Bacteria  normal  normal 
 
 
-
 
NC_006274  BCZK1890  GntR family transcriptional regulator  23.6 
 
 
466 aa  67.8  0.0000000004  Bacillus cereus E33L  Bacteria  normal  0.0766739  n/a   
 
 
-
 
NC_011369  Rleg2_0907  transcriptional regulator, GntR family with aminotransferase domain  28.31 
 
 
467 aa  67.8  0.0000000004  Rhizobium leguminosarum bv. trifolii WSM2304  Bacteria  normal  0.358943  normal 
 
 
-
 
NC_012918  GM21_0850  transcriptional regulator, GntR family with aminotransferase domain  24.18 
 
 
492 aa  67.8  0.0000000004  Geobacter sp. M21  Bacteria  n/a    normal 
 
 
-
 
NC_013947  Snas_1082  transcriptional regulator, GntR family with aminotransferase domain-containing protein  28.41 
 
 
457 aa  67.8  0.0000000004  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  0.029023  normal 
 
 
-
 
NC_003909  BCE_2170  GntR family transcriptional regulator  23.88 
 
 
466 aa  67.4  0.0000000005  Bacillus cereus ATCC 10987  Bacteria  normal  0.662886  n/a   
 
 
-
 
NC_010184  BcerKBAB4_1937  GntR family transcriptional regulator  23.88 
 
 
466 aa  67.4  0.0000000005  Bacillus weihenstephanensis KBAB4  Bacteria  normal  n/a   
 
 
-
 
NC_010678  Rpic_4705  transcriptional regulator, GntR family with aminotransferase domain  23.64 
 
 
472 aa  67.4  0.0000000005  Ralstonia pickettii 12J  Bacteria  normal  hitchhiker  0.00798058 
 
 
-
 
NC_012857  Rpic12D_3628  transcriptional regulator, GntR family with aminotransferase domain protein  23.64 
 
 
472 aa  67.4  0.0000000005  Ralstonia pickettii 12D  Bacteria  normal  normal 
 
 
-
 
NC_007948  Bpro_2911  GntR family transcriptional regulator  26.07 
 
 
471 aa  67.4  0.0000000005  Polaromonas sp. JS666  Bacteria  normal  normal  0.86551 
 
 
-
 
NC_011658  BCAH187_A2184  transcriptional regulator, GntR family  24.16 
 
 
466 aa  67.4  0.0000000006  Bacillus cereus AH187  Bacteria  normal  n/a   
 
 
-
 
NC_009832  Spro_0076  transcriptional regulator  26.17 
 
 
488 aa  67.4  0.0000000006  Serratia proteamaculans 568  Bacteria  normal  normal 
 
 
-
 
NC_014151  Cfla_2093  transcriptional regulator, GntR family with aminotransferase domain  28.7 
 
 
503 aa  67  0.0000000007  Cellulomonas flavigena DSM 20109  Bacteria  normal  0.619312  normal 
 
 
-
 
NC_007973  Rmet_0208  GntR family transcriptional regulator  25 
 
 
466 aa  67  0.0000000007  Cupriavidus metallidurans CH34  Bacteria  normal  normal 
 
 
-
 
NC_010623  Bphy_4559  transcriptional regulator  25.89 
 
 
463 aa  66.6  0.0000000008  Burkholderia phymatum STM815  Bacteria  normal  normal  0.516829 
 
 
-
 
NC_010505  Mrad2831_3290  transcriptional regulator  27.81 
 
 
463 aa  66.6  0.0000000008  Methylobacterium radiotolerans JCM 2831  Bacteria  normal  0.70657  normal 
 
 
-
 
NC_008576  Mmc1_0766  GntR family transcriptional regulator  25.06 
 
 
473 aa  66.6  0.0000000008  Magnetococcus sp. MC-1  Bacteria  normal  0.124102  normal 
 
 
-
 
NC_005957  BT9727_1900  GntR family transcriptional regulator  23.31 
 
 
466 aa  66.6  0.0000000009  Bacillus thuringiensis serovar konkukian str. 97-27  Bacteria  decreased coverage  0.000823779  n/a   
 
 
-
 
NC_008786  Veis_2152  GntR family transcriptional regulator  25.38 
 
 
465 aa  66.6  0.0000000009  Verminephrobacter eiseniae EF01-2  Bacteria  normal  0.162886  normal 
 
 
-
 
NC_009052  Sbal_1936  GntR family transcriptional regulator  23.41 
 
 
427 aa  66.2  0.000000001  Shewanella baltica OS155  Bacteria  normal  n/a   
 
 
-
 
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