Gene Spro_2563 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSpro_2563 
Symbol 
ID5604437 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSerratia proteamaculans 568 
KingdomBacteria 
Replicon accessionNC_009832 
Strand
Start bp2818422 
End bp2819726 
Gene Length1305 bp 
Protein Length434 aa 
Translation table11 
GC content61% 
IMG OID640938102 
Producttranscriptional regulator 
Protein accessionYP_001478792 
Protein GI157370803 
COG category[E] Amino acid transport and metabolism
[K] Transcription 
COG ID[COG1167] Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain (MocR family) and their eukaryotic orthologs 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones27 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones23 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGGTTCAT TGTATGCAAA AGGCGGCAGC GCTGTCCAGA TTGCTGAACA GATCAGCACG 
CAGATCAAGC AGGGGGATTT ACAGCCGGGT GACCTGTTGC CGCCGGTGCG TCAACTGGCC
GGTGAGCTGG AAGTTAACCC CAATACCGTT GCCAGCGCCT ATGGCAAGCT GCGCGATGCC
GGGTTGGTCG CTACCCGCGG GCGTGCCGGT ACTCAGGTAC TGGAGCAACC CCTGATGGCG
GTACGCAGTG TTCGGCAGGT ACCCGAAGGC ATGCGTGATT TGGCCAGCGG CAATCTGGAT
GGCACCTTGC TACCGGCACT GTCGCTGAGT GCGGCCGACG TCTTCCCACA GCAGAGTGGC
TATGACATCA GCGGTGATTT ACCGGCGCTA TGTCAGCTTG CCGCTGACTG GTTGAGCCAA
CAGGGGACGG AACTGGGTGA GACGGCGGTG TTTTCCGGGG CGCTGGATGC CATCGAAAAG
GCGCTGCGCA GCCATGCGGC ACCGGGGGCC TCGGTGTGGG TGGAAGATCC CTGCTGGCCA
CCGTTATTGA CGCTGCTGCG GCATCTGCGT CTCAAACCCT TGCCGTTGCT GGTGGATGAA
CAGGGTTGCC GTCTGCCGGA AAAGGACGCG GGTACGCAGG GGTGTGCAGT GATCCTGACG
CCACGCGCAC AGAACCCAAC CGGTATGTCG CTTAGCGCTA CACGTGCCAA TGACTGGCGT
GAGTTCCTGG CCCAAAATCC GGGTTGTCTG GCGATTGTCG ATGATTTCTG GGGGCCGCTA
TCGCAACAGC CACTGAATTT GCCGTTTACG GCAGACAAGG GTTTGTATGT GCTGTCACTG
AGCAAGTTTC TCAGTCCGGA TCTGCGTATA GCGCTGGCCT GCGGCAAGCC GCAACTGTTG
CAGGCAATGC GTGCGGATCA ATACATACGC GAACGCTGGG TCAGCCATAT TCTGCAGCAA
ATTGCCGCCA AATTATGGGT GCAGGCGCAG CGTGATGGCT TGCTGGTGCG GGCGCAGCAG
GCTTACCAGC AACGACGAGA CGCGTTGACG GAGCGGTTGC AAGCATTGAC CGGCTCGCGG
TTAGCTCCGG GTGAAGGGGT ACATATCTGG CTGCCGGTGC GTTCAGAAGC CGCCGCCAGC
CAAATCATGG CACAGCGCGG CTGGTTGGTG CAGGGCGGTG AACCCTTCCG TCTGAAAAGC
GGCCCGGCGA TCCGTGTCAG CCTGGCCAAC CTGTTTCCGG AGCAGTTAGA GGAACTGGCT
CAGGATCTGG CCGTGGCCAT CGGCGCGGGT GCCGTGGTGA ACTGA
 
Protein sequence
MGSLYAKGGS AVQIAEQIST QIKQGDLQPG DLLPPVRQLA GELEVNPNTV ASAYGKLRDA 
GLVATRGRAG TQVLEQPLMA VRSVRQVPEG MRDLASGNLD GTLLPALSLS AADVFPQQSG
YDISGDLPAL CQLAADWLSQ QGTELGETAV FSGALDAIEK ALRSHAAPGA SVWVEDPCWP
PLLTLLRHLR LKPLPLLVDE QGCRLPEKDA GTQGCAVILT PRAQNPTGMS LSATRANDWR
EFLAQNPGCL AIVDDFWGPL SQQPLNLPFT ADKGLYVLSL SKFLSPDLRI ALACGKPQLL
QAMRADQYIR ERWVSHILQQ IAAKLWVQAQ RDGLLVRAQQ AYQQRRDALT ERLQALTGSR
LAPGEGVHIW LPVRSEAAAS QIMAQRGWLV QGGEPFRLKS GPAIRVSLAN LFPEQLEELA
QDLAVAIGAG AVVN