| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mpe_A3480 |
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| Symbol | |
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| ID | 4786242 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Methylibium petroleiphilum PM1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008825 |
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| Strand | + |
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| Start bp | 3691046 |
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| End bp | 3692491 |
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| Gene Length | 1446 bp |
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| Protein Length | 481 aa |
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| Translation table | 11 |
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| GC content | 73% |
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| IMG OID | 640092061 |
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| Product | GntR family transcriptional regulator |
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| Protein accession | YP_001022668 |
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| Protein GI | 124268664 |
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| COG category | [E] Amino acid transport and metabolism
[K] Transcription |
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| COG ID | [COG1167] Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain (MocR family) and their eukaryotic orthologs |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.324042 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 22 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCAATCAA TGCGCCATCC CGACCCCCTG CCCTCGCCCT TCATCCCCAT GGCCGCCGCC
AAACCCATGC AGCACTGGCT GCGCCGACTC GAGGGCAGCG ACCGGCCCGC CTACCTGCTG
ATCGCCGACC TGATCGCCGA GGACCTGCGC ACCGGCCGGC TCGGCGCGCA GGAGCGCCTG
CCCACGCTGC GCCAGTTGGC CGACAGCCTG CGGCTCAACT ACACCACGGT GGCGCGCGCC
TATGGCGAGG CGCGCAAGCG CGGGCTGATC GACTCGCGTC CCGGCATGGG CACCTACGTG
CGCGGGCGCA GCCCGGCCGT GCCGCTGCGC GGCGGCAGCG GCGCGGAGAT GACGATGAAC
CTGCCGCCGG AGCCCGAGGA CCCGGCGCTG GTCGAGCGCC TGCGCGACAG CGCCCGCGAG
CTGATGGCCC GCAGCGACCT GTACACGCTG ATGCGCTATC AGGATTTCGG CGGCTCGCCC
GAGGACAAGG ACGCCGCGGT GCAGTGGCTG CGCCACCGTT TGCCGGACTG CAGCGCCGAG
CGCGTGCTGG TCTGCCCCGG CATCCACAGC GCGCTGGCCG CACTGGTGTC GCAGCTGGCG
CGGCCGGGCG AGCTGGTGTG CGTGGAGTCG CTCACCTACC CGGGCATCAA GGCGATCGCC
ACCCAGCTCG GCGTGCAGCT GCACGCGCTG GCGCTCGACG ACGAAGGCCC GAGTGCGGCC
GACTTCGAAC AGGCCTGCAA GACCCTCAAG CCCAAGGCGC TGTACTGCAA CCCGACGCTG
CTGAACCCGA CCACGCTCAC CACCTCGAAG CGGCGGCGCG AGGCGCTGGC CGACATCGCG
CTGCGCTACA GCGTGCCGAT CGTCGAGGAC GACGCCTACT CGATGCTGCC GCGCGAGGTG
CCGCCGCCGC TGGCGCTGCT GGCGCCGGAG CTCACCTACT ACGTCACCGG TTTCAGCAAG
TGTCTCGGCG CGGGCCTGCG CACCGCCTAC GTCAGTGCGC CCAGCGAACG CCAGGCCCAG
CGGCTGGCCG GCGCGCTGCG CGCCACCACG GTGATGGCGT CGCCGGTGAC CAATGCGCTG
GCCACCCGCT GGGTCGTCGA CGGCAGCGCG CAGGCGATGC TGCAGGCGAT CCGCAACGAG
TCGATCGCCA GGCAGGCGAT GGCGGCCCGC CACCTGGCGC GCCACGCGGT GCAGGCGCAG
CCGGAGGGCT TCCACCTCTG GCTGCCGCTG TCCTCTTCGT GGAGCACGGT GGAGTTCGCG
TCCTACCTGC GCACCCAGGG CGTCGGCGTG GTGGCCAGCG CCGCCTTCTC GACCGACGGC
GATCCGCCGG ACGCGGTGCG CATCTGCCTC GGCGGCCCGC TGACGCGCGA GGACTGCGAC
GCCGCGCTGC GGCTGATCGC CGACACGCTG GACCACCCGC TGCATCCGCA CGCCACCGTG
ATGTAG
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| Protein sequence | MQSMRHPDPL PSPFIPMAAA KPMQHWLRRL EGSDRPAYLL IADLIAEDLR TGRLGAQERL
PTLRQLADSL RLNYTTVARA YGEARKRGLI DSRPGMGTYV RGRSPAVPLR GGSGAEMTMN
LPPEPEDPAL VERLRDSARE LMARSDLYTL MRYQDFGGSP EDKDAAVQWL RHRLPDCSAE
RVLVCPGIHS ALAALVSQLA RPGELVCVES LTYPGIKAIA TQLGVQLHAL ALDDEGPSAA
DFEQACKTLK PKALYCNPTL LNPTTLTTSK RRREALADIA LRYSVPIVED DAYSMLPREV
PPPLALLAPE LTYYVTGFSK CLGAGLRTAY VSAPSERQAQ RLAGALRATT VMASPVTNAL
ATRWVVDGSA QAMLQAIRNE SIARQAMAAR HLARHAVQAQ PEGFHLWLPL SSSWSTVEFA
SYLRTQGVGV VASAAFSTDG DPPDAVRICL GGPLTREDCD AALRLIADTL DHPLHPHATV
M
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