More than 300 homologs were found in PanDaTox collection
for query gene Rleg2_5225 on replicon NC_011368
Organism: Rhizobium leguminosarum bv. trifolii WSM2304



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_011368  Rleg2_5225  transcriptional regulator, GntR family with aminotransferase domain  100 
 
 
441 aa  889    Rhizobium leguminosarum bv. trifolii WSM2304  Bacteria  normal  normal  0.260155 
 
 
-
 
NC_012848  Rleg_5410  transcriptional regulator, GntR family with aminotransferase domain  69.53 
 
 
441 aa  627  1e-178  Rhizobium leguminosarum bv. trifolii WSM1325  Bacteria  normal  normal 
 
 
-
 
NC_008254  Meso_0044  GntR family transcriptional regulator  55.99 
 
 
445 aa  490  1e-137  Chelativorans sp. BNC1  Bacteria  normal  n/a   
 
 
-
 
NC_012880  Dd703_0385  transcriptional regulator, GntR family with aminotransferase domain  50.11 
 
 
452 aa  451  1e-125  Dickeya dadantii Ech703  Bacteria  normal  0.577938  n/a   
 
 
-
 
NC_007951  Bxe_A1472  GntR family transcriptional regulator  51.09 
 
 
449 aa  427  1e-118  Burkholderia xenovorans LB400  Bacteria  normal  normal  0.240551 
 
 
-
 
NC_007952  Bxe_B2819  GntR family transcriptional regulator  38.78 
 
 
467 aa  268  2e-70  Burkholderia xenovorans LB400  Bacteria  normal  normal 
 
 
-
 
NC_014151  Cfla_1430  transcriptional regulator, GntR family with aminotransferase domain  39.53 
 
 
446 aa  261  2e-68  Cellulomonas flavigena DSM 20109  Bacteria  normal  0.0746057  normal 
 
 
-
 
NC_014158  Tpau_0837  transcriptional regulator, GntR family with aminotransferase domain  39.03 
 
 
462 aa  258  1e-67  Tsukamurella paurometabola DSM 20162  Bacteria  normal  0.439147  n/a   
 
 
-
 
NC_013521  Sked_24220  transcriptional regulator with HTH domain and aminotransferase domain  35.67 
 
 
448 aa  250  3e-65  Sanguibacter keddieii DSM 10542  Bacteria  normal  normal 
 
 
-
 
NC_010816  BLD_1418  putative transcriptional regulator  34.87 
 
 
532 aa  224  3e-57  Bifidobacterium longum DJO10A  Bacteria  normal  n/a   
 
 
-
 
NC_013947  Snas_4186  transcriptional regulator, GntR family with aminotransferase domain-containing protein  35.95 
 
 
436 aa  200  3.9999999999999996e-50  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  0.710263  normal  0.0862967 
 
 
-
 
NC_013124  Afer_0940  transcriptional regulator, GntR family with aminotransferase domain  33.49 
 
 
462 aa  167  2.9999999999999998e-40  Acidimicrobium ferrooxidans DSM 10331  Bacteria  normal  0.0465159  n/a   
 
 
-
 
NC_011149  SeAg_B2581  GntR-family transcriptional regulator  32.18 
 
 
430 aa  154  2e-36  Salmonella enterica subsp. enterica serovar Agona str. SL483  Bacteria  normal  n/a   
 
 
-
 
NC_011083  SeHA_C2696  GntR family transcriptional regulator  31.93 
 
 
430 aa  154  2.9999999999999998e-36  Salmonella enterica subsp. enterica serovar Heidelberg str. SL476  Bacteria  normal  normal 
 
 
-
 
NC_011205  SeD_A2802  GntR family transcriptional regulator  31.93 
 
 
430 aa  153  5e-36  Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853  Bacteria  normal  normal 
 
 
-
 
NC_011080  SNSL254_A2630  GntR family transcriptional regulator  31.93 
 
 
430 aa  153  5e-36  Salmonella enterica subsp. enterica serovar Newport str. SL254  Bacteria  normal  0.0520726  normal 
 
 
-
 
NC_011094  SeSA_A2672  GntR-family transcriptional regulator  31.93 
 
 
430 aa  152  8.999999999999999e-36  Salmonella enterica subsp. enterica serovar Schwarzengrund str. CVM19633  Bacteria  normal  0.562569  normal 
 
 
-
 
NC_013131  Caci_1566  transcriptional regulator, GntR family with aminotransferase domain  34.63 
 
 
444 aa  146  9e-34  Catenulispora acidiphila DSM 44928  Bacteria  normal  normal  0.487946 
 
 
-
 
NC_009832  Spro_2563  transcriptional regulator  32 
 
 
434 aa  144  2e-33  Serratia proteamaculans 568  Bacteria  normal  normal 
 
 
-
 
NC_009425  Ent638_4213  GntR family transcriptional regulator  28.03 
 
 
432 aa  142  9.999999999999999e-33  Enterobacter sp. 638  Bacteria  normal  0.0990086  normal 
 
 
-
 
NC_007974  Rmet_4117  transcriptional regulator with aminotransferase and DNA binding domains (possibly involved in vitB6 biosynthesis)  29.32 
 
 
431 aa  134  3.9999999999999996e-30  Cupriavidus metallidurans CH34  Bacteria  normal  normal 
 
 
-
 
NC_011071  Smal_2382  transcriptional regulator, GntR family with aminotransferase domain  31.73 
 
 
428 aa  133  6.999999999999999e-30  Stenotrophomonas maltophilia R551-3  Bacteria  normal  0.268016  normal 
 
 
-
 
NC_014213  Mesil_3297  hypothetical protein  28.73 
 
 
493 aa  126  7e-28  Meiothermus silvanus DSM 9946  Bacteria  normal  normal  0.0920316 
 
 
-
 
NC_013172  Bfae_00360  transcriptional regulator with HTH domain and aminotransferase domain  32.42 
 
 
455 aa  125  2e-27  Brachybacterium faecium DSM 4810  Bacteria  normal  n/a   
 
 
-
 
NC_013946  Mrub_0775  GntR family transcriptional regulator with aminotransferase domain  30.32 
 
 
484 aa  124  4e-27  Meiothermus ruber DSM 1279  Bacteria  normal  0.835406  normal  0.904358 
 
 
-
 
NC_008752  Aave_0017  GntR family transcriptional regulator  31.18 
 
 
442 aa  119  9.999999999999999e-26  Acidovorax citrulli AAC00-1  Bacteria  normal  normal 
 
 
-
 
NC_014151  Cfla_2093  transcriptional regulator, GntR family with aminotransferase domain  31.42 
 
 
503 aa  116  7.999999999999999e-25  Cellulomonas flavigena DSM 20109  Bacteria  normal  0.619312  normal 
 
 
-
 
NC_008782  Ajs_4162  GntR family transcriptional regulator  31.12 
 
 
442 aa  115  2.0000000000000002e-24  Acidovorax sp. JS42  Bacteria  normal  normal 
 
 
-
 
NC_011992  Dtpsy_0018  transcriptional regulator, GntR family with aminotransferase domain  30.64 
 
 
442 aa  112  2.0000000000000002e-23  Acidovorax ebreus TPSY  Bacteria  normal  0.316764  n/a   
 
 
-
 
NC_008463  PA14_69750  putative transcriptional regulator  26.43 
 
 
458 aa  112  2.0000000000000002e-23  Pseudomonas aeruginosa UCBPP-PA14  Bacteria  normal  0.477513  normal  0.557474 
 
 
-
 
NC_009708  YpsIP31758_1217  GntR family transcriptional regulator  27.63 
 
 
501 aa  110  5e-23  Yersinia pseudotuberculosis IP 31758  Bacteria  normal  n/a   
 
 
-
 
NC_010159  YpAngola_A3105  GntR family transcriptional regulator  27.63 
 
 
501 aa  110  7.000000000000001e-23  Yersinia pestis Angola  Bacteria  normal  normal 
 
 
-
 
NC_010465  YPK_1334  transcriptional regulator  27.37 
 
 
501 aa  108  2e-22  Yersinia pseudotuberculosis YPIII  Bacteria  normal  n/a   
 
 
-
 
NC_007643  Rru_A3041  GntR family transcriptional regulator  30.05 
 
 
467 aa  108  3e-22  Rhodospirillum rubrum ATCC 11170  Bacteria  normal  n/a   
 
 
-
 
NC_011898  Ccel_1857  transcriptional regulator, GntR family with aminotransferase domain  23.6 
 
 
468 aa  105  1e-21  Clostridium cellulolyticum H10  Bacteria  normal  n/a   
 
 
-
 
NC_009656  PSPA7_6026  GntR family transcriptional regulator  25.65 
 
 
461 aa  104  3e-21  Pseudomonas aeruginosa PA7  Bacteria  normal  n/a   
 
 
-
 
NC_013739  Cwoe_0342  transcriptional regulator, GntR family with aminotransferase domain  29.41 
 
 
482 aa  104  4e-21  Conexibacter woesei DSM 14684  Bacteria  decreased coverage  0.00152858  normal  0.162942 
 
 
-
 
NC_009972  Haur_3364  transcriptional regulator  26.42 
 
 
498 aa  103  9e-21  Herpetosiphon aurantiacus ATCC 23779  Bacteria  normal  n/a   
 
 
-
 
NC_010676  Bphyt_4517  transcriptional regulator, GntR family with aminotransferase domain  27.32 
 
 
471 aa  102  2e-20  Burkholderia phytofirmans PsJN  Bacteria  normal  normal 
 
 
-
 
NC_011772  BCG9842_B3337  transcriptional regulator, GntR family  25.5 
 
 
480 aa  101  2e-20  Bacillus cereus G9842  Bacteria  normal  0.157491  hitchhiker  0.0000000000000475852 
 
 
-
 
NC_011769  DvMF_2175  transcriptional regulator, GntR family with aminotransferase domain  27.43 
 
 
498 aa  102  2e-20  Desulfovibrio vulgaris str. 'Miyazaki F'  Bacteria  n/a    normal 
 
 
-
 
NC_010320  Teth514_2175  GntR family transcriptional regulator  24.83 
 
 
477 aa  102  2e-20  Thermoanaerobacter sp. X514  Bacteria  normal  n/a   
 
 
-
 
NC_006274  BCZK1804  GntR family transcriptional regulator  25.72 
 
 
481 aa  100  4e-20  Bacillus cereus E33L  Bacteria  normal  n/a   
 
 
-
 
NC_011658  BCAH187_A0345  transcriptional regulator, GntR family  22.54 
 
 
470 aa  100  6e-20  Bacillus cereus AH187  Bacteria  normal  0.469578  n/a   
 
 
-
 
NC_009832  Spro_3347  transcriptional regulator  25.82 
 
 
500 aa  98.6  2e-19  Serratia proteamaculans 568  Bacteria  normal  normal 
 
 
-
 
NC_009512  Pput_3072  GntR family transcriptional regulator  26.73 
 
 
455 aa  98.2  2e-19  Pseudomonas putida F1  Bacteria  normal  0.536959  normal 
 
 
-
 
NC_011083  SeHA_C2985  GntR family transcriptional regulator  27.67 
 
 
444 aa  98.2  3e-19  Salmonella enterica subsp. enterica serovar Heidelberg str. SL476  Bacteria  normal  normal  0.12333 
 
 
-
 
NC_011205  SeD_A3108  GntR family transcriptional regulator  27.67 
 
 
444 aa  98.2  3e-19  Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853  Bacteria  normal  0.552212  normal  0.675979 
 
 
-
 
NC_011094  SeSA_A2950  transcriptional regulator, GntR family with aminotransferase domain  27.67 
 
 
444 aa  98.2  3e-19  Salmonella enterica subsp. enterica serovar Schwarzengrund str. CVM19633  Bacteria  normal  0.130328  normal  0.0175968 
 
 
-
 
NC_007963  Csal_2733  GntR family transcriptional regulator  28.42 
 
 
467 aa  97.8  3e-19  Chromohalobacter salexigens DSM 3043  Bacteria  normal  n/a   
 
 
-
 
NC_011149  SeAg_B2919  transcriptional regulator, GntR family with aminotransferase domain  27.67 
 
 
444 aa  98.2  3e-19  Salmonella enterica subsp. enterica serovar Agona str. SL483  Bacteria  normal  n/a   
 
 
-
 
NC_011080  SNSL254_A3002  GntR family transcriptional regulator  27.67 
 
 
444 aa  97.8  3e-19  Salmonella enterica subsp. enterica serovar Newport str. SL254  Bacteria  normal  hitchhiker  0.00227723 
 
 
-
 
NC_008044  TM1040_0156  GntR family transcriptional regulator  27.27 
 
 
488 aa  97.8  4e-19  Ruegeria sp. TM1040  Bacteria  normal  normal 
 
 
-
 
NC_010498  EcSMS35_2793  GntR family transcriptional regulator  27.25 
 
 
444 aa  97.1  6e-19  Escherichia coli SMS-3-5  Bacteria  normal  normal  0.102841 
 
 
-
 
NC_011353  ECH74115_3915  transcriptional regulator, GntR family  26.8 
 
 
444 aa  96.7  7e-19  Escherichia coli O157:H7 str. EC4115  Bacteria  normal  normal  0.0753496 
 
 
-
 
NC_012848  Rleg_5234  transcriptional regulator, GntR family with aminotransferase domain  25.95 
 
 
461 aa  96.7  8e-19  Rhizobium leguminosarum bv. trifolii WSM1325  Bacteria  normal  normal  0.214132 
 
 
-
 
NC_007298  Daro_1063  GntR family transcriptional regulator  26.74 
 
 
470 aa  96.3  9e-19  Dechloromonas aromatica RCB  Bacteria  normal  normal 
 
 
-
 
NC_013739  Cwoe_1217  transcriptional regulator, GntR family with aminotransferase domain  30.36 
 
 
466 aa  95.9  1e-18  Conexibacter woesei DSM 14684  Bacteria  normal  normal  0.217148 
 
 
-
 
NC_013173  Dbac_0439  transcriptional regulator, GntR family with aminotransferase domain protein  27.66 
 
 
517 aa  96.3  1e-18  Desulfomicrobium baculatum DSM 4028  Bacteria  normal  n/a   
 
 
-
 
NC_007492  Pfl01_4193  GntR family transcriptional regulator  27.52 
 
 
466 aa  95.9  1e-18  Pseudomonas fluorescens Pf0-1  Bacteria  normal  normal 
 
 
-
 
NC_009972  Haur_1240  transcriptional regulator  24.42 
 
 
478 aa  96.3  1e-18  Herpetosiphon aurantiacus ATCC 23779  Bacteria  normal  n/a   
 
 
-
 
NC_011658  BCAH187_A2087  transcription regulator, GntR family  25.5 
 
 
480 aa  94.7  2e-18  Bacillus cereus AH187  Bacteria  hitchhiker  0.00000314762  n/a   
 
 
-
 
NC_009513  Lreu_1902  aromatic amino acid aminotransferase / 2-aminoadipate aminotransferase  27.64 
 
 
397 aa  94.7  3e-18  Lactobacillus reuteri DSM 20016  Bacteria  normal  n/a   
 
 
-
 
NC_009012  Cthe_2689  GntR family transcriptional regulator  24.88 
 
 
498 aa  94.4  3e-18  Clostridium thermocellum ATCC 27405  Bacteria  hitchhiker  0.00169618  n/a   
 
 
-
 
NC_014210  Ndas_1604  transcriptional regulator, GntR family with aminotransferase domain  27.76 
 
 
494 aa  94.4  4e-18  Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111  Bacteria  normal  normal  0.172343 
 
 
-
 
NC_008060  Bcen_1433  GntR family transcriptional regulator  26.37 
 
 
470 aa  94  5e-18  Burkholderia cenocepacia AU 1054  Bacteria  normal  0.139667  n/a   
 
 
-
 
NC_008544  Bcen2424_6395  GntR family transcriptional regulator  26.37 
 
 
470 aa  94  5e-18  Burkholderia cenocepacia HI2424  Bacteria  normal  normal 
 
 
-
 
NC_009052  Sbal_4072  GntR family transcriptional regulator  24.93 
 
 
458 aa  94  5e-18  Shewanella baltica OS155  Bacteria  normal  n/a   
 
 
-
 
NC_010184  BcerKBAB4_1853  transcriptional regulator  24.62 
 
 
480 aa  93.6  6e-18  Bacillus weihenstephanensis KBAB4  Bacteria  normal  0.406204  n/a   
 
 
-
 
NC_009832  Spro_4307  transcriptional regulator  27.78 
 
 
488 aa  93.6  6e-18  Serratia proteamaculans 568  Bacteria  normal  normal 
 
 
-
 
NC_011772  BCG9842_B2188  transcriptional regulator, GntR family/aminotransferase, class I protein  23.94 
 
 
483 aa  93.6  7e-18  Bacillus cereus G9842  Bacteria  normal  hitchhiker  0.0027297 
 
 
-
 
NC_010002  Daci_2829  GntR family transcriptional regulator  27.87 
 
 
398 aa  93.6  7e-18  Delftia acidovorans SPH-1  Bacteria  normal  0.286553  normal  0.182864 
 
 
-
 
NC_008686  Pden_0279  GntR family transcriptional regulator  27.32 
 
 
461 aa  93.6  7e-18  Paracoccus denitrificans PD1222  Bacteria  normal  normal 
 
 
-
 
NC_010524  Lcho_4183  transcriptional regulator  25.11 
 
 
492 aa  93.6  7e-18  Leptothrix cholodnii SP-6  Bacteria  n/a    normal 
 
 
-
 
NC_006274  BCZK2781  GntR family transcriptional regulator  22.96 
 
 
480 aa  93.2  8e-18  Bacillus cereus E33L  Bacteria  normal  n/a   
 
 
-
 
NC_010184  BcerKBAB4_2409  transcriptional regulator  24.78 
 
 
479 aa  93.2  8e-18  Bacillus weihenstephanensis KBAB4  Bacteria  hitchhiker  0.00453228  n/a   
 
 
-
 
NC_009620  Smed_3701  GntR family transcriptional regulator  25.12 
 
 
478 aa  92.8  1e-17  Sinorhizobium medicae WSM419  Bacteria  normal  normal 
 
 
-
 
NC_003909  BCE_2769  GntR family transcriptional regulator  23.61 
 
 
477 aa  92.8  1e-17  Bacillus cereus ATCC 10987  Bacteria  decreased coverage  0.0000296805  n/a   
 
 
-
 
NC_003909  BCE_3093  GntR family transcriptional regulator  22.74 
 
 
480 aa  92.8  1e-17  Bacillus cereus ATCC 10987  Bacteria  normal  0.0883302  n/a   
 
 
-
 
NC_005957  BT9727_2820  GntR family transcriptional regulator  23.71 
 
 
480 aa  92.4  1e-17  Bacillus thuringiensis serovar konkukian str. 97-27  Bacteria  normal  n/a   
 
 
-
 
NC_007973  Rmet_1126  GntR family transcriptional regulator  26.1 
 
 
475 aa  92.4  1e-17  Cupriavidus metallidurans CH34  Bacteria  normal  normal 
 
 
-
 
NC_011773  BCAH820_3074  transcriptional regulator, GntR family/aminotransferase, class I protein  23.71 
 
 
480 aa  92.4  1e-17  Bacillus cereus AH820  Bacteria  n/a    normal 
 
 
-
 
NC_009674  Bcer98_2044  GntR family transcriptional regulator  22.49 
 
 
480 aa  92.8  1e-17  Bacillus cytotoxicus NVH 391-98  Bacteria  normal  0.439116  n/a   
 
 
-
 
NC_011368  Rleg2_5513  transcriptional regulator, GntR family with aminotransferase domain  24.58 
 
 
461 aa  92.8  1e-17  Rhizobium leguminosarum bv. trifolii WSM2304  Bacteria  normal  0.412768  decreased coverage  0.00050533 
 
 
-
 
NC_011365  Gdia_0682  transcriptional regulator, GntR family with aminotransferase domain  30.9 
 
 
474 aa  92.8  1e-17  Gluconacetobacter diazotrophicus PAl 5  Bacteria  normal  hitchhiker  0.000368055 
 
 
-
 
NC_009832  Spro_0112  transcriptional regulator  24.01 
 
 
484 aa  91.7  2e-17  Serratia proteamaculans 568  Bacteria  normal  normal 
 
 
-
 
NC_010676  Bphyt_4240  transcriptional regulator, GntR family with aminotransferase domain  25.98 
 
 
517 aa  92  2e-17  Burkholderia phytofirmans PsJN  Bacteria  normal  normal 
 
 
-
 
NC_011658  BCAH187_A3091  transcriptional regulator, GntR family/aminotransferase, class I protein  23.71 
 
 
480 aa  92  2e-17  Bacillus cereus AH187  Bacteria  hitchhiker  0.0045104  n/a   
 
 
-
 
NC_011725  BCB4264_A1992  transcriptional regulator, GntR family  25.5 
 
 
480 aa  92  2e-17  Bacillus cereus B4264  Bacteria  normal  0.0394003  n/a   
 
 
-
 
NC_011725  BCB4264_A3058  transcriptional regulator, GntR family  23.71 
 
 
480 aa  92  2e-17  Bacillus cereus B4264  Bacteria  normal  n/a   
 
 
-
 
NC_008781  Pnap_2629  GntR family transcriptional regulator  27.76 
 
 
463 aa  92  2e-17  Polaromonas naphthalenivorans CJ2  Bacteria  normal  normal 
 
 
-
 
NC_013093  Amir_5490  putative transcriptional regulator, GntR family  29.04 
 
 
377 aa  91.3  3e-17  Actinosynnema mirum DSM 43827  Bacteria  normal  0.110442  n/a   
 
 
-
 
NC_005945  BAS2847  GntR family transcriptional regulator  22.74 
 
 
480 aa  91.3  3e-17  Bacillus anthracis str. Sterne  Bacteria  normal  n/a   
 
 
-
 
NC_007511  Bcep18194_B1990  GntR family transcriptional regulator  25.89 
 
 
508 aa  91.7  3e-17  Burkholderia sp. 383  Bacteria  normal  normal 
 
 
-
 
NC_007530  GBAA_3062  GntR family transcriptional regulator  22.74 
 
 
480 aa  91.3  3e-17  Bacillus anthracis str. 'Ames Ancestor'  Bacteria  normal  n/a   
 
 
-
 
NC_011662  Tmz1t_2226  transcriptional regulator, GntR family with aminotransferase domain  26.11 
 
 
470 aa  91.3  3e-17  Thauera sp. MZ1T  Bacteria  normal  n/a   
 
 
-
 
NC_012880  Dd703_1783  transcriptional regulator, GntR family with aminotransferase domain  26.05 
 
 
501 aa  90.5  5e-17  Dickeya dadantii Ech703  Bacteria  normal  0.26432  n/a   
 
 
-
 
NC_011894  Mnod_3968  transcriptional regulator, GntR family with aminotransferase domain protein  26.5 
 
 
464 aa  90.5  5e-17  Methylobacterium nodulans ORS 2060  Bacteria  normal  n/a   
 
 
-
 
NC_007908  Rfer_0591  GntR family transcriptional regulator  26.18 
 
 
464 aa  90.5  5e-17  Rhodoferax ferrireducens T118  Bacteria  normal  n/a   
 
 
-
 
NC_009513  Lreu_0310  GntR family transcriptional regulator  27.27 
 
 
397 aa  90.5  5e-17  Lactobacillus reuteri DSM 20016  Bacteria  unclonable  0.0000000000040274  n/a   
 
 
-
 
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