Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Daci_2829 |
Symbol | |
ID | 5748405 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Delftia acidovorans SPH-1 |
Kingdom | Bacteria |
Replicon accession | NC_010002 |
Strand | + |
Start bp | 3105642 |
End bp | 3106838 |
Gene Length | 1197 bp |
Protein Length | 398 aa |
Translation table | 11 |
GC content | 68% |
IMG OID | 641297924 |
Product | GntR family transcriptional regulator |
Protein accession | YP_001563852 |
Protein GI | 160898270 |
COG category | [E] Amino acid transport and metabolism [K] Transcription |
COG ID | [COG1167] Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain (MocR family) and their eukaryotic orthologs |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 19 |
Plasmid unclonability p-value | 0.286553 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 27 |
Fosmid unclonability p-value | 0.182864 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCAATTCG CCGACCGTCT GAACAACGTA GAAACCTCCG CCATCCGCGA GCTGTTCAAG CTGCTGGGCA AGCCCGGCAT CATCAGCTTT GCGGGTGGTT TCCCGGACAG CGCCATGTTC GACGTGGCCG GCATCAGCGC CGCCTCCCAG GCCGCGCTGC AGCAGGAACC GGGCGCCGCG CTGCAGTACG GTGCGACCGA GGGCTACCAG CCGCTGCGCG AGCAGATCGC AGCCTTCATG GCCGCCAAGG GCGTGCGCGA GCTGGCCCCC GAGCAACTGG TGGTGACCAC GGGCAGCCAG CAGGCGCTGG ACCTGCTGGG CAAGACCATG ATCAACCCCG GCGACAAGGT CATCGTCGAA GGCCCGACCT TCCTGGCCAC CATCCAGTGC TTCCGCCTGT ACGGCGCCGA AGTCATCAGC GCGCCCATCG ATGCCGAAGG CGCCCAGGTC GATGCGCTGG AGCAACTCAT TGCCGAGCAC CGCCCCAAGC TGGTCTACCT GATCCCCACC TTCGGCAACC CCAGCGGCGC CATGCTGAGC CTGGAACGCC GCAAAAAGGT GCTGGAGCTG GCCGTCAAGT ACCAGACCCT GGTGGTGGAA GACGATCCCT ACGGCGACCT GTATTTTGGC GAAGCGCCTC CGCCCAGCCT GCTGGCGCTG TCCAGCCAGG TGCCCGGCAG CCGCGACTGG CTGGCGCACT GCGGCTCGCT GAGCAAGGTG CTCAGCCCCG GCCTGCGCAT TGGCTGGCTG GTGGCCCCGG CCGAGCTGCT GGGCCGCGCC GTGATGTGCA AGCAGTTCAG CGATGCCCAC ACCAGCACCT TTGCCCAGGC CACGGCCGCG CAGTACCTGA AGTCCGGCGC CATGCCCGCC ACGCTGGCCC ATGTGCGCGA GGTCTACGCG CGCCGCGCCA AGGCCATGGG CGATGCGCTG CGCGAGCACC TCGGCGATGC CGTGGAATTC CTGCAGCCCC AGGGCGGCCT GTTCCTGTGG GTGCGCCTGA CCGGCAAGGG CGGCGCGCTG GCCGATGCCG GTGAGTTGGC CAAGCGGGCC ATTGCCCAGG GCGTGGCCTT TGTGCCGGGT GCGCCGTTCT TTGCGCAAAA CCCCGATGCC ACCAGCTTCC GCCTCTCGTT CGCCACGGCT GACGAGGACA AGATCCGCGA AGGCATCGCC CGCCTGGCCC AGGCGCTCAA GGCATGA
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Protein sequence | MQFADRLNNV ETSAIRELFK LLGKPGIISF AGGFPDSAMF DVAGISAASQ AALQQEPGAA LQYGATEGYQ PLREQIAAFM AAKGVRELAP EQLVVTTGSQ QALDLLGKTM INPGDKVIVE GPTFLATIQC FRLYGAEVIS APIDAEGAQV DALEQLIAEH RPKLVYLIPT FGNPSGAMLS LERRKKVLEL AVKYQTLVVE DDPYGDLYFG EAPPPSLLAL SSQVPGSRDW LAHCGSLSKV LSPGLRIGWL VAPAELLGRA VMCKQFSDAH TSTFAQATAA QYLKSGAMPA TLAHVREVYA RRAKAMGDAL REHLGDAVEF LQPQGGLFLW VRLTGKGGAL ADAGELAKRA IAQGVAFVPG APFFAQNPDA TSFRLSFATA DEDKIREGIA RLAQALKA
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