More than 300 homologs were found in PanDaTox collection
for query gene Bxe_A1472 on replicon NC_007951
Organism: Burkholderia xenovorans LB400



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_007951  Bxe_A1472  GntR family transcriptional regulator  100 
 
 
449 aa  914    Burkholderia xenovorans LB400  Bacteria  normal  normal  0.240551 
 
 
-
 
NC_012848  Rleg_5410  transcriptional regulator, GntR family with aminotransferase domain  50.97 
 
 
441 aa  432  1e-120  Rhizobium leguminosarum bv. trifolii WSM1325  Bacteria  normal  normal 
 
 
-
 
NC_011368  Rleg2_5225  transcriptional regulator, GntR family with aminotransferase domain  50.47 
 
 
441 aa  432  1e-120  Rhizobium leguminosarum bv. trifolii WSM2304  Bacteria  normal  normal  0.260155 
 
 
-
 
NC_012880  Dd703_0385  transcriptional regulator, GntR family with aminotransferase domain  46.42 
 
 
452 aa  408  1.0000000000000001e-112  Dickeya dadantii Ech703  Bacteria  normal  0.577938  n/a   
 
 
-
 
NC_008254  Meso_0044  GntR family transcriptional regulator  44.7 
 
 
445 aa  384  1e-105  Chelativorans sp. BNC1  Bacteria  normal  n/a   
 
 
-
 
NC_014151  Cfla_1430  transcriptional regulator, GntR family with aminotransferase domain  37.97 
 
 
446 aa  262  8e-69  Cellulomonas flavigena DSM 20109  Bacteria  normal  0.0746057  normal 
 
 
-
 
NC_013521  Sked_24220  transcriptional regulator with HTH domain and aminotransferase domain  36.47 
 
 
448 aa  248  2e-64  Sanguibacter keddieii DSM 10542  Bacteria  normal  normal 
 
 
-
 
NC_007952  Bxe_B2819  GntR family transcriptional regulator  34.41 
 
 
467 aa  226  5.0000000000000005e-58  Burkholderia xenovorans LB400  Bacteria  normal  normal 
 
 
-
 
NC_014158  Tpau_0837  transcriptional regulator, GntR family with aminotransferase domain  36.36 
 
 
462 aa  215  9.999999999999999e-55  Tsukamurella paurometabola DSM 20162  Bacteria  normal  0.439147  n/a   
 
 
-
 
NC_010816  BLD_1418  putative transcriptional regulator  34.29 
 
 
532 aa  198  2.0000000000000003e-49  Bifidobacterium longum DJO10A  Bacteria  normal  n/a   
 
 
-
 
NC_013947  Snas_4186  transcriptional regulator, GntR family with aminotransferase domain-containing protein  33.1 
 
 
436 aa  178  2e-43  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  0.710263  normal  0.0862967 
 
 
-
 
NC_013124  Afer_0940  transcriptional regulator, GntR family with aminotransferase domain  33.98 
 
 
462 aa  169  1e-40  Acidimicrobium ferrooxidans DSM 10331  Bacteria  normal  0.0465159  n/a   
 
 
-
 
NC_011071  Smal_2382  transcriptional regulator, GntR family with aminotransferase domain  31.95 
 
 
428 aa  165  2.0000000000000002e-39  Stenotrophomonas maltophilia R551-3  Bacteria  normal  0.268016  normal 
 
 
-
 
NC_011094  SeSA_A2672  GntR-family transcriptional regulator  29.26 
 
 
430 aa  160  5e-38  Salmonella enterica subsp. enterica serovar Schwarzengrund str. CVM19633  Bacteria  normal  0.562569  normal 
 
 
-
 
NC_011205  SeD_A2802  GntR family transcriptional regulator  29.5 
 
 
430 aa  159  1e-37  Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853  Bacteria  normal  normal 
 
 
-
 
NC_011149  SeAg_B2581  GntR-family transcriptional regulator  29.5 
 
 
430 aa  158  2e-37  Salmonella enterica subsp. enterica serovar Agona str. SL483  Bacteria  normal  n/a   
 
 
-
 
NC_011083  SeHA_C2696  GntR family transcriptional regulator  29.26 
 
 
430 aa  157  3e-37  Salmonella enterica subsp. enterica serovar Heidelberg str. SL476  Bacteria  normal  normal 
 
 
-
 
NC_011080  SNSL254_A2630  GntR family transcriptional regulator  29.02 
 
 
430 aa  155  1e-36  Salmonella enterica subsp. enterica serovar Newport str. SL254  Bacteria  normal  0.0520726  normal 
 
 
-
 
NC_007974  Rmet_4117  transcriptional regulator with aminotransferase and DNA binding domains (possibly involved in vitB6 biosynthesis)  29.95 
 
 
431 aa  142  9.999999999999999e-33  Cupriavidus metallidurans CH34  Bacteria  normal  normal 
 
 
-
 
NC_013131  Caci_1566  transcriptional regulator, GntR family with aminotransferase domain  31.16 
 
 
444 aa  140  3.9999999999999997e-32  Catenulispora acidiphila DSM 44928  Bacteria  normal  normal  0.487946 
 
 
-
 
NC_009425  Ent638_4213  GntR family transcriptional regulator  27.75 
 
 
432 aa  131  3e-29  Enterobacter sp. 638  Bacteria  normal  0.0990086  normal 
 
 
-
 
NC_009832  Spro_2563  transcriptional regulator  30.47 
 
 
434 aa  130  5.0000000000000004e-29  Serratia proteamaculans 568  Bacteria  normal  normal 
 
 
-
 
NC_013172  Bfae_00360  transcriptional regulator with HTH domain and aminotransferase domain  29.43 
 
 
455 aa  124  3e-27  Brachybacterium faecium DSM 4810  Bacteria  normal  n/a   
 
 
-
 
NC_011992  Dtpsy_0018  transcriptional regulator, GntR family with aminotransferase domain  29.18 
 
 
442 aa  121  1.9999999999999998e-26  Acidovorax ebreus TPSY  Bacteria  normal  0.316764  n/a   
 
 
-
 
NC_007643  Rru_A3041  GntR family transcriptional regulator  30.24 
 
 
467 aa  112  1.0000000000000001e-23  Rhodospirillum rubrum ATCC 11170  Bacteria  normal  n/a   
 
 
-
 
NC_008782  Ajs_4162  GntR family transcriptional regulator  28.24 
 
 
442 aa  112  2.0000000000000002e-23  Acidovorax sp. JS42  Bacteria  normal  normal 
 
 
-
 
NC_008752  Aave_0017  GntR family transcriptional regulator  28.95 
 
 
442 aa  107  4e-22  Acidovorax citrulli AAC00-1  Bacteria  normal  normal 
 
 
-
 
NC_012848  Rleg_5234  transcriptional regulator, GntR family with aminotransferase domain  26.24 
 
 
461 aa  102  2e-20  Rhizobium leguminosarum bv. trifolii WSM1325  Bacteria  normal  normal  0.214132 
 
 
-
 
NC_011368  Rleg2_5513  transcriptional regulator, GntR family with aminotransferase domain  25.59 
 
 
461 aa  100  4e-20  Rhizobium leguminosarum bv. trifolii WSM2304  Bacteria  normal  0.412768  decreased coverage  0.00050533 
 
 
-
 
NC_008686  Pden_0279  GntR family transcriptional regulator  27.23 
 
 
461 aa  99.8  8e-20  Paracoccus denitrificans PD1222  Bacteria  normal  normal 
 
 
-
 
NC_014213  Mesil_3297  hypothetical protein  26.64 
 
 
493 aa  97.8  3e-19  Meiothermus silvanus DSM 9946  Bacteria  normal  normal  0.0920316 
 
 
-
 
NC_009719  Plav_2133  GntR family transcriptional regulator  24.77 
 
 
476 aa  97.4  5e-19  Parvibaculum lavamentivorans DS-1  Bacteria  normal  normal 
 
 
-
 
NC_009972  Haur_3364  transcriptional regulator  26.05 
 
 
498 aa  97.4  5e-19  Herpetosiphon aurantiacus ATCC 23779  Bacteria  normal  n/a   
 
 
-
 
NC_007492  Pfl01_2317  GntR family transcriptional regulator  27.36 
 
 
462 aa  96.7  8e-19  Pseudomonas fluorescens Pf0-1  Bacteria  normal  normal 
 
 
-
 
NC_010086  Bmul_3400  transcriptional regulator  26.8 
 
 
442 aa  95.1  2e-18  Burkholderia multivorans ATCC 17616  Bacteria  normal  0.167973  normal 
 
 
-
 
NC_013739  Cwoe_1217  transcriptional regulator, GntR family with aminotransferase domain  29.29 
 
 
466 aa  95.1  2e-18  Conexibacter woesei DSM 14684  Bacteria  normal  normal  0.217148 
 
 
-
 
NC_011894  Mnod_3968  transcriptional regulator, GntR family with aminotransferase domain protein  26.63 
 
 
464 aa  93.6  7e-18  Methylobacterium nodulans ORS 2060  Bacteria  normal  n/a   
 
 
-
 
NC_011312  VSAL_I1306  putative HTH-type trancriptional regulator, GntR family  23.92 
 
 
446 aa  92.8  1e-17  Aliivibrio salmonicida LFI1238  Bacteria  normal  0.734577  n/a   
 
 
-
 
NC_010681  Bphyt_2639  transcriptional regulator, GntR family with aminotransferase domain  25.53 
 
 
477 aa  92.8  1e-17  Burkholderia phytofirmans PsJN  Bacteria  normal  0.147714  normal 
 
 
-
 
NC_007951  Bxe_A1487  GntR family transcriptional regulator  26.62 
 
 
477 aa  91.7  2e-17  Burkholderia xenovorans LB400  Bacteria  normal  0.539495  normal  0.767107 
 
 
-
 
NC_007298  Daro_1063  GntR family transcriptional regulator  26.57 
 
 
470 aa  90.9  4e-17  Dechloromonas aromatica RCB  Bacteria  normal  normal 
 
 
-
 
NC_011894  Mnod_4044  transcriptional regulator, GntR family with aminotransferase domain protein  26.9 
 
 
461 aa  90.9  4e-17  Methylobacterium nodulans ORS 2060  Bacteria  normal  0.24687  n/a   
 
 
-
 
NC_007973  Rmet_1126  GntR family transcriptional regulator  25.38 
 
 
475 aa  90.9  4e-17  Cupriavidus metallidurans CH34  Bacteria  normal  normal 
 
 
-
 
NC_009620  Smed_3701  GntR family transcriptional regulator  24.76 
 
 
478 aa  89.7  8e-17  Sinorhizobium medicae WSM419  Bacteria  normal  normal 
 
 
-
 
NC_009664  Krad_3599  putative transcriptional regulator, GntR family  26.81 
 
 
470 aa  89.7  1e-16  Kineococcus radiotolerans SRS30216  Bacteria  normal  0.208438  normal  0.182209 
 
 
-
 
NC_013946  Mrub_0775  GntR family transcriptional regulator with aminotransferase domain  24.71 
 
 
484 aa  89.4  1e-16  Meiothermus ruber DSM 1279  Bacteria  normal  0.835406  normal  0.904358 
 
 
-
 
NC_008044  TM1040_1386  GntR family transcriptional regulator  27.86 
 
 
471 aa  88.6  2e-16  Ruegeria sp. TM1040  Bacteria  normal  normal 
 
 
-
 
NC_009439  Pmen_3095  GntR family transcriptional regulator  26.88 
 
 
491 aa  88.2  2e-16  Pseudomonas mendocina ymp  Bacteria  normal  0.259075  normal 
 
 
-
 
NC_010676  Bphyt_4517  transcriptional regulator, GntR family with aminotransferase domain  25.41 
 
 
471 aa  88.2  3e-16  Burkholderia phytofirmans PsJN  Bacteria  normal  normal 
 
 
-
 
NC_013173  Dbac_0439  transcriptional regulator, GntR family with aminotransferase domain protein  24.88 
 
 
517 aa  87.4  5e-16  Desulfomicrobium baculatum DSM 4028  Bacteria  normal  n/a   
 
 
-
 
NC_009439  Pmen_1514  GntR family transcriptional regulator  27.6 
 
 
444 aa  87.4  5e-16  Pseudomonas mendocina ymp  Bacteria  normal  0.550844  normal  0.508918 
 
 
-
 
NC_010676  Bphyt_5339  transcriptional regulator, GntR family with aminotransferase domain  25.06 
 
 
469 aa  87  7e-16  Burkholderia phytofirmans PsJN  Bacteria  normal  0.485061  normal 
 
 
-
 
NC_009832  Spro_1440  transcriptional regulator  26.29 
 
 
482 aa  86.3  9e-16  Serratia proteamaculans 568  Bacteria  normal  normal 
 
 
-
 
NC_010524  Lcho_4183  transcriptional regulator  26.07 
 
 
492 aa  86.3  0.000000000000001  Leptothrix cholodnii SP-6  Bacteria  n/a    normal 
 
 
-
 
NC_010511  M446_3848  transcriptional regulator  28.21 
 
 
463 aa  85.9  0.000000000000001  Methylobacterium sp. 4-46  Bacteria  normal  normal 
 
 
-
 
NC_010498  EcSMS35_1735  GntR family transcriptional regulator  25.06 
 
 
468 aa  85.1  0.000000000000002  Escherichia coli SMS-3-5  Bacteria  normal  0.453488  hitchhiker  0.0000000000634797 
 
 
-
 
NC_009656  PSPA7_0959  hypothetical protein  26.61 
 
 
500 aa  84.7  0.000000000000003  Pseudomonas aeruginosa PA7  Bacteria  normal  n/a   
 
 
-
 
NC_009438  Sputcn32_0931  GntR family transcriptional regulator  25.11 
 
 
479 aa  84.7  0.000000000000003  Shewanella putrefaciens CN-32  Bacteria  normal  n/a   
 
 
-
 
NC_008463  PA14_10530  GntR family transcriptional regulator  26.61 
 
 
471 aa  84.7  0.000000000000003  Pseudomonas aeruginosa UCBPP-PA14  Bacteria  normal  normal 
 
 
-
 
NC_011353  ECH74115_2044  transcriptional regulator, GntR family/aminotransferase, classes I and II  25.12 
 
 
468 aa  84.3  0.000000000000004  Escherichia coli O157:H7 str. EC4115  Bacteria  hitchhiker  0.00402201  hitchhiker  0.0000000000000583102 
 
 
-
 
NC_007492  Pfl01_3553  GntR family transcriptional regulator  26.85 
 
 
472 aa  84  0.000000000000005  Pseudomonas fluorescens Pf0-1  Bacteria  normal  normal  0.32329 
 
 
-
 
CP001509  ECD_01396  fused predicted DNA-binding transcriptional regulator/predicted amino transferase  25.81 
 
 
468 aa  83.6  0.000000000000006  Escherichia coli BL21(DE3)  Bacteria  normal  n/a   
 
 
-
 
CP001637  EcDH1_2207  transcriptional regulator, GntR family with aminotransferase domain  25.81 
 
 
468 aa  83.6  0.000000000000006  Escherichia coli DH1  Bacteria  normal  n/a   
 
 
-
 
NC_009436  Ent638_2129  GntR family transcriptional regulator  24.94 
 
 
469 aa  84  0.000000000000006  Enterobacter sp. 638  Bacteria  normal  0.98832  normal 
 
 
-
 
NC_010468  EcolC_2220  transcriptional regulator  25.81 
 
 
468 aa  83.6  0.000000000000006  Escherichia coli ATCC 8739  Bacteria  normal  normal  0.94237 
 
 
-
 
NC_009801  EcE24377A_1618  GntR family transcriptional regulator  25.81 
 
 
468 aa  83.6  0.000000000000006  Escherichia coli E24377A  Bacteria  normal  n/a   
 
 
-
 
NC_012892  B21_01407  hypothetical protein  25.81 
 
 
468 aa  83.6  0.000000000000006  Escherichia coli BL21  Bacteria  normal  n/a   
 
 
-
 
NC_009800  EcHS_A1523  GntR family transcriptional regulator  25.81 
 
 
468 aa  83.6  0.000000000000007  Escherichia coli HS  Bacteria  normal  n/a   
 
 
-
 
NC_011894  Mnod_3954  transcriptional regulator, GntR family with aminotransferase domain protein  28.02 
 
 
463 aa  83.2  0.000000000000008  Methylobacterium nodulans ORS 2060  Bacteria  normal  0.890066  n/a   
 
 
-
 
NC_011094  SeSA_A1716  aminotransferase, classes I and II superfamily  23.97 
 
 
474 aa  83.2  0.000000000000009  Salmonella enterica subsp. enterica serovar Schwarzengrund str. CVM19633  Bacteria  normal  normal 
 
 
-
 
NC_010515  Bcenmc03_5809  transcriptional regulator  25.57 
 
 
477 aa  82.8  0.00000000000001  Burkholderia cenocepacia MC0-3  Bacteria  normal  0.231946  normal 
 
 
-
 
NC_009665  Shew185_3448  GntR family transcriptional regulator  24.62 
 
 
470 aa  82  0.00000000000002  Shewanella baltica OS185  Bacteria  normal  n/a   
 
 
-
 
NC_011663  Sbal223_3375  transcriptional regulator, GntR family with aminotransferase domain  24.62 
 
 
470 aa  81.6  0.00000000000002  Shewanella baltica OS223  Bacteria  normal  normal 
 
 
-
 
NC_009783  VIBHAR_01894  hypothetical protein  24.81 
 
 
463 aa  82  0.00000000000002  Vibrio harveyi ATCC BAA-1116  Bacteria  n/a    n/a   
 
 
-
 
NC_007511  Bcep18194_B1356  GntR family transcriptional regulator  25.8 
 
 
477 aa  82.4  0.00000000000002  Burkholderia sp. 383  Bacteria  normal  normal  0.130979 
 
 
-
 
NC_011149  SeAg_B1562  aminotransferase, classes I and II superfamily  23.97 
 
 
474 aa  81.6  0.00000000000002  Salmonella enterica subsp. enterica serovar Agona str. SL483  Bacteria  normal  n/a   
 
 
-
 
NC_012880  Dd703_3726  transcriptional regulator, GntR family with aminotransferase domain  26.32 
 
 
479 aa  82  0.00000000000002  Dickeya dadantii Ech703  Bacteria  normal  n/a   
 
 
-
 
NC_008061  Bcen_3874  GntR family transcriptional regulator  25.57 
 
 
477 aa  81.6  0.00000000000002  Burkholderia cenocepacia AU 1054  Bacteria  normal  n/a   
 
 
-
 
NC_011083  SeHA_C1778  aminotransferase, classes I and II superfamily  23.97 
 
 
474 aa  81.6  0.00000000000002  Salmonella enterica subsp. enterica serovar Heidelberg str. SL476  Bacteria  normal  normal 
 
 
-
 
NC_011080  SNSL254_A1713  aminotransferase, classes I and II superfamily  23.97 
 
 
474 aa  81.6  0.00000000000002  Salmonella enterica subsp. enterica serovar Newport str. SL254  Bacteria  normal  normal 
 
 
-
 
NC_011205  SeD_A1743  aminotransferase  23.97 
 
 
474 aa  81.6  0.00000000000002  Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853  Bacteria  normal  0.455944  normal 
 
 
-
 
NC_008543  Bcen2424_4495  GntR family transcriptional regulator  25.57 
 
 
477 aa  81.6  0.00000000000002  Burkholderia cenocepacia HI2424  Bacteria  normal  normal 
 
 
-
 
NC_013595  Sros_2147  putative transcriptional regulator, GntR family  27.1 
 
 
453 aa  81.6  0.00000000000002  Streptosporangium roseum DSM 43021  Bacteria  normal  normal  0.267565 
 
 
-
 
NC_010506  Swoo_1939  transcriptional regulator  22.95 
 
 
476 aa  81.3  0.00000000000004  Shewanella woodyi ATCC 51908  Bacteria  normal  0.0234327  normal  0.0215976 
 
 
-
 
NC_013421  Pecwa_1524  transcriptional regulator, GntR family with aminotransferase domain protein  24.31 
 
 
483 aa  80.9  0.00000000000005  Pectobacterium wasabiae WPP163  Bacteria  normal  0.790712  n/a   
 
 
-
 
NC_011365  Gdia_0682  transcriptional regulator, GntR family with aminotransferase domain  26.78 
 
 
474 aa  80.9  0.00000000000005  Gluconacetobacter diazotrophicus PAl 5  Bacteria  normal  hitchhiker  0.000368055 
 
 
-
 
NC_008699  Noca_1688  GntR family transcriptional regulator  27.18 
 
 
491 aa  80.5  0.00000000000005  Nocardioides sp. JS614  Bacteria  normal  0.82306  n/a   
 
 
-
 
NC_010338  Caul_2483  transcriptional regulator  26.78 
 
 
470 aa  80.1  0.00000000000007  Caulobacter sp. K31  Bacteria  normal  0.0358309  normal 
 
 
-
 
NC_010623  Bphy_3581  transcriptional regulator  23.27 
 
 
473 aa  80.1  0.00000000000007  Burkholderia phymatum STM815  Bacteria  normal  0.634992  normal  0.954313 
 
 
-
 
NC_010625  Bphy_5571  transcriptional regulator  25.33 
 
 
444 aa  80.1  0.00000000000008  Burkholderia phymatum STM815  Bacteria  normal  normal 
 
 
-
 
NC_009997  Sbal195_3572  transcriptional regulator  24.23 
 
 
470 aa  79.7  0.00000000000009  Shewanella baltica OS195  Bacteria  normal  normal  0.529399 
 
 
-
 
NC_010625  Bphy_6902  transcriptional regulator  27.29 
 
 
488 aa  79.7  0.00000000000009  Burkholderia phymatum STM815  Bacteria  normal  0.78999  normal 
 
 
-
 
NC_013456  VEA_003147  GntR-family regulatory protein  24.81 
 
 
468 aa  79.7  0.00000000000009  Vibrio sp. Ex25  Bacteria  hitchhiker  0.00323958  n/a   
 
 
-
 
NC_008062  Bcen_5795  GntR family transcriptional regulator  25.91 
 
 
447 aa  79.7  0.00000000000009  Burkholderia cenocepacia AU 1054  Bacteria  normal  n/a   
 
 
-
 
NC_008544  Bcen2424_6160  GntR family transcriptional regulator  25.91 
 
 
447 aa  79.7  0.00000000000009  Burkholderia cenocepacia HI2424  Bacteria  normal  normal 
 
 
-
 
NC_005957  BT9727_2820  GntR family transcriptional regulator  23.19 
 
 
480 aa  79.3  0.0000000000001  Bacillus thuringiensis serovar konkukian str. 97-27  Bacteria  normal  n/a   
 
 
-
 
NC_011772  BCG9842_B2188  transcriptional regulator, GntR family/aminotransferase, class I protein  23.42 
 
 
483 aa  79.7  0.0000000000001  Bacillus cereus G9842  Bacteria  normal  hitchhiker  0.0027297 
 
 
-
 
NC_010512  Bcenmc03_6020  transcriptional regulator  24.4 
 
 
474 aa  78.6  0.0000000000002  Burkholderia cenocepacia MC0-3  Bacteria  normal  0.492916  normal  0.125321 
 
 
-
 
NC_010658  SbBS512_E4761  aminotransferase, classes I and II superfamily  24.76 
 
 
471 aa  78.6  0.0000000000002  Shigella boydii CDC 3083-94  Bacteria  normal  n/a   
 
 
-
 
NC_009052  Sbal_0915  GntR family transcriptional regulator  24.35 
 
 
470 aa  79  0.0000000000002  Shewanella baltica OS155  Bacteria  normal  n/a   
 
 
-
 
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