| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | TM1040_1386 |
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| Symbol | |
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| ID | 4075879 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ruegeria sp. TM1040 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008044 |
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| Strand | - |
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| Start bp | 1480196 |
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| End bp | 1481611 |
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| Gene Length | 1416 bp |
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| Protein Length | 471 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 638006696 |
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| Product | GntR family transcriptional regulator |
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| Protein accession | YP_613381 |
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| Protein GI | 99081227 |
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| COG category | [E] Amino acid transport and metabolism
[K] Transcription |
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| COG ID | [COG1167] Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain (MocR family) and their eukaryotic orthologs |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 17 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGGTACAA TTTGGCCCTC CACCCTGACC GGGTCCCTGA CCGAAAAGCC GGGGCCCAAG
TACAAGCGCG TGGCTGATAC GATACGATTG GCGGTGGAGA GTGGTACATT GCAGGTGGGC
GCAAAGCTGC CGCCTGTCCG CGAGCTCGCC TATCAGCTCA GTATCACGCC TGGCACCGTC
GCGCGGGCCT ACACGATCCT GACAGACGAG GGCATCTTGC AGGCCGAGGT CGGACGCGGA
ACCTTTGTGG CCGAACGCGA AACGGCTGTG ATGGATGACG TCTGGTCGCG GCAGTTGCAT
CTTCTTGAAC GCAGCAACCC CAATCACGTC TCTCTGTTCA GCCCGCGTCT TGTCGACGTG
GGTCAAGTCA AGCTGATCCG CGAAGCGCTC CGAAAAGCCG CTGATTGCGA CCGCTTGGCG
TTGTTGAATT ATCCGACGCG CGACGCCTAT CAGCCGGTGC GCCAAGCGGT TGTCGACTGG
CTATCCGATA CCCCGCTCGG GCCACTGAGT GAGCGCGATG TGGTCTTGAC CCATGGGGGC
CAGAATGCCG TCATGACGGT GATGCAAGCG ATCCTGAAAG AGAGCAATCC CACCATCTTG
GTCGAGGACC TCTCTTATGC CGGGTTCAGG CGCGCTGCAG AGATCCTGCG TGCCAAAGTG
GTCGGTGTTG CGATCGACGA AAACGGCATT GTGCCAGAGG CGTTGGAGGC TGCGATCAAG
AAATCGGGTG CATCTGTACT TTGTACCAGT CCCGAAGTGC ACAATCCAAC CGGCGCTTTT
ACCCCGCTTG AACGGCGCAA AGAGATCCTC GCCATATTGA GACGACACAA TGTACAATTG
ATCGAGGACG ATTGTTATCG CATGGGGGAG GCCCGCGCGC CGACCTATCG CGCGCTCGCG
CCGGAGCTCA GCTGGCATGT GACATCGATT TCCAAATCGC TCACCCCGGC GCTGCGGGTG
GGGTTTGCAA TCGCCCCCGT CGGCAAATCC GCAGATCTGC GCCGCGTTGC GGAATACGGT
TTCTTTGGGC TTGCGCAGCC GCTCGCCGAG GTGACACGCC TGCTATTGTC GGACCCGCGC
AGCAAGAAGC TGGTCCAGAC CGTGCGCGAC GAGATGGCGG AATATGTCCG TGTCGCCGTA
AACGCCCTCG GAGCCTTTGA ACTCACCTGG GACTCGCAGG TGCCGTTCCT TTGGCTGCGG
CTGCCTTCGG GCTGGCGAGC GGGTGCGTTT ACACGTGCGG CCGAAGGGCA GGGGGTGCAA
CTGCGCTCTG CAGATGAGTT TGCCCTGAGG GACGGGCGTG CGCCCAATGC AGTGCGCATC
GCCGTCAATG GGCATGTCAC GCTGGCGCGA TTTGAGGATG CCATGCTGCG TTTGCGCATG
CTATTGGACA ACCCACCAGA GCAAATCAGC GTCTGA
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| Protein sequence | MGTIWPSTLT GSLTEKPGPK YKRVADTIRL AVESGTLQVG AKLPPVRELA YQLSITPGTV
ARAYTILTDE GILQAEVGRG TFVAERETAV MDDVWSRQLH LLERSNPNHV SLFSPRLVDV
GQVKLIREAL RKAADCDRLA LLNYPTRDAY QPVRQAVVDW LSDTPLGPLS ERDVVLTHGG
QNAVMTVMQA ILKESNPTIL VEDLSYAGFR RAAEILRAKV VGVAIDENGI VPEALEAAIK
KSGASVLCTS PEVHNPTGAF TPLERRKEIL AILRRHNVQL IEDDCYRMGE ARAPTYRALA
PELSWHVTSI SKSLTPALRV GFAIAPVGKS ADLRRVAEYG FFGLAQPLAE VTRLLLSDPR
SKKLVQTVRD EMAEYVRVAV NALGAFELTW DSQVPFLWLR LPSGWRAGAF TRAAEGQGVQ
LRSADEFALR DGRAPNAVRI AVNGHVTLAR FEDAMLRLRM LLDNPPEQIS V
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