| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pmen_1514 |
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| Symbol | |
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| ID | 5106566 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas mendocina ymp |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009439 |
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| Strand | - |
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| Start bp | 1676053 |
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| End bp | 1677387 |
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| Gene Length | 1335 bp |
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| Protein Length | 444 aa |
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| Translation table | 11 |
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| GC content | 70% |
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| IMG OID | 640502742 |
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| Product | GntR family transcriptional regulator |
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| Protein accession | YP_001187010 |
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| Protein GI | 146306545 |
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| COG category | [E] Amino acid transport and metabolism
[K] Transcription |
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| COG ID | [COG1167] Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain (MocR family) and their eukaryotic orthologs |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 22 |
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| Plasmid unclonability p-value | 0.550844 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 36 |
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| Fosmid unclonability p-value | 0.508918 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCCCCGTG CGCGCTACAA GCAACTGGTC GATCAGTTGG CCGCCGACAT CCGCTGCGGC
GCGCTCGCGC CCGGCACACG CCTGCCCACG CACCGCGAAC TGGCCGCGCA GCACGGCATC
GCCCTGGTCA CCGCATCACG GGTCTACGCC GAGCTGCACG CTATGGGCCT GGTCAGTGGC
GAAACCGGGC GCGGTACCTT CGTGCGCGAG ACCAGCCTGG CGCCTGGCCA CGGTATCGAC
CAGCCGGCGA CCGAGGGCGG CATGCTCGAC CTCAACTTCA ACTACCCCAC GTCGCCGGGC
CAGGCCGACC TGCTGCGCCA GGCCCTGCGC CAGCTGGCAT TGTCCGGCGA CCTAGAGGCG
CTGCTGCGCT ACCAGCCGCA TGCTGGTCGC CCCCATGAGC GGGCATTGCT GGCCAGGCAC
CTGACGGATC AGGGACTCCC GGTCACGGCG CAACAGGTGC TGATCGTCAA CGGCGCCCAG
CACGGCCTGG CGCTGACCCT GCAGACCCTG CTCAAGCCCG GTGACGTGGT CGCGGTCGAC
GCCCTCACCT ACCCCGGTTT CAAGGCGGCC GCCGCCGCGC GCGGCGTGGA ATTGCTGGCA
GTACCTTGCG ATGCCAGCGG CCCCGATTTC GCTGCCCTGG CAGCGCTGTG CAGAACGCGC
CGGGTACGGG CGATCTACAG CATGCCGACC CTGCACAACC CGCTGGGCTG GGTACTCGAC
CGGCCGCAGC GCGAGCGCCT GATCGAGATT GCCCGCGAGC ACGACTTGCT GATCATCGAG
GATGCCGCCT ACGCCTTCCT GGCCAGCTCG GCACCAGCGC CACTGGCCGC CCTGGCGCCC
GAACGCACGG TGCATGTGTC CGGCTTCTCG AAGAACATCG CCACCGGCTT GCGGGTTGGC
TACCTGACTG CGCCTGCCGT CTGGGTCGCC GCACTGGAGC GCAGCATCCG CGCCAGCACC
TGGAACACCC CGGGCATCAT GACGGCGCTG GTCTGCGCCT GGATCGAAGA CGGCACACTG
GCCCGCCTGC AAGCGCAGAA GCGCGAGGAC GCCCGCTGTC GGCAAGCGCG GGCTCGGCGC
GTGCTGGCCG GCCTGCAACC GATCGGCCAT GAGGCCGGCT ACTTCCTCTG GCTGCCATTA
CCGACCGAGG TGCGCGCCGA TCAGGTCGTG GCGCGCCTGC TGCACGAGCA GGTGGCGGTC
TCCACCGCAG AGCCGTTCAG CACCTCGGAG CAGGTGCCCC ATGCGCTGCG CCTGGCCCTT
GGCTCGGTCA CCCTGGCGCA ACTGGAAGAT GGGCTGGACA AGGTCAGGCA AGCCATCGCC
CATTTCGCCT ATTGA
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| Protein sequence | MPRARYKQLV DQLAADIRCG ALAPGTRLPT HRELAAQHGI ALVTASRVYA ELHAMGLVSG
ETGRGTFVRE TSLAPGHGID QPATEGGMLD LNFNYPTSPG QADLLRQALR QLALSGDLEA
LLRYQPHAGR PHERALLARH LTDQGLPVTA QQVLIVNGAQ HGLALTLQTL LKPGDVVAVD
ALTYPGFKAA AAARGVELLA VPCDASGPDF AALAALCRTR RVRAIYSMPT LHNPLGWVLD
RPQRERLIEI AREHDLLIIE DAAYAFLASS APAPLAALAP ERTVHVSGFS KNIATGLRVG
YLTAPAVWVA ALERSIRAST WNTPGIMTAL VCAWIEDGTL ARLQAQKRED ARCRQARARR
VLAGLQPIGH EAGYFLWLPL PTEVRADQVV ARLLHEQVAV STAEPFSTSE QVPHALRLAL
GSVTLAQLED GLDKVRQAIA HFAY
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