| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | EcSMS35_1735 |
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| Symbol | |
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| ID | 6145643 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Escherichia coli SMS-3-5 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010498 |
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| Strand | - |
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| Start bp | 1739827 |
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| End bp | 1741233 |
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| Gene Length | 1407 bp |
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| Protein Length | 468 aa |
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| Translation table | 11 |
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| GC content | 51% |
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| IMG OID | 641616611 |
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| Product | GntR family transcriptional regulator |
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| Protein accession | YP_001743789 |
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| Protein GI | 170682466 |
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| COG category | [E] Amino acid transport and metabolism
[K] Transcription |
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| COG ID | [COG1167] Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain (MocR family) and their eukaryotic orthologs |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 0.453488 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 10 |
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| Fosmid unclonability p-value | 0.0000000000634797 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGAAAAAAT ACCAGCAGCT TGCAGAACAA TTACGCGAGC AGATTGCGTC GGGTATCTGG
CAACCCGGAG ATCGTTTGCC TTCGTTGCGT GACCAGGTGG CACTTTCTGG CATGAGCTTT
ATGACCGTGA GCCATGCCTA TCAGTTGCTC GAAAGTCAGG GATATATTAT CGCACGACCG
CAGTCGGGTT ATTACGTTGC GCCACAGGCA ATAAAAATGC CGAAAGCGCC AGTCATTCCA
GTCACTCGAG ATGAAGCAGT CGATATCAAC ACTTATATTT TTGATATGTT GCAGGCCAGT
CGCGATCCGT CGGTCGTTCC GTTTGCCTCG GCCTTTCCCG ACCCGCGACT TTTCCCCCTC
CAACAACTAA ACCGCTCGCT GGCGCAGGTA AGCAAAACCG CCACAGCGAT GAGCGTGATT
GAAAACTTAC CGCCAGGAAA CGCAGAACTG CGTCAGGCTA TTGCTCGTCG CTATGCCTTA
CAGGGCATCA CTATTTCTCC AGATGAAATT GCCATTACCG CCGGGGCGTT AGAGGCATTA
AACCTCAGTT TGCAAGTGGT AACTGAACCG GGCGATTGGG TGATAGTAGA GAATCCTTGT
TTCTACGGCG CTTTGCAGGC GCTGGAGCGG TTACGGCTGA AGGCGTTATC GGTGGCGACG
GACGTTAAAG AAGGGATCGA TCTTCAGGCG CTGGAACTGG CGTTGCAGGA GTATCCGGTG
AAAGCGTGCT GGCTGATGAC TAATAGCCAG AATCCACTCG GATTTACCTT AACACCGCAA
AAAAAAGCAC AACTGGTGGC GTTGCTCAAT CAGTACAACG TAACGCTGAT TGAAGATGAC
GTTTACAGCG AACTTTATTT TGGACGGGAA AAACCGCTGC CTGCGAAAGC GTGGGATCAC
CACGATGGTG TTTTGCATTG CTCTTCGTTT TCGAAATGTC TGGTGCCTGG TTTTCGTATT
GGTTGGGTCG CCGCCGGAAA ACATGCACGT AAAATTCAAC GCTTGCAGTT GATGAGTACG
CTTTCCACCA GCTCACCGAT GCAGCTTGCG CTGGTGGATT ACCTTTCTAC TCGCCGATAC
GATGCTCATC TTCGTCGTCT GCGTCGCCAG CTTGCGGAAC GTAAACAACG CGCCTGGCAG
GCTTTGCTGC GTTATCTGCC TGCGGAAGTC AAAATTCATC ACAATGACAG CGGTTATTTT
CTCTGGCTGG AGCTCCCCGA GCCGTTAGAT GCAGGAGAAT TAAGCCTGGT GGCACTGACG
CATCATATCA GTATTGCGCC GGGTAAAATG TTTTCTACCG GTGAAAACTG GTCACGTTTT
TTTCGTTTTA ATACCGCGTG GCAGTGGGGA GAACGTGAAG AACAGGCGGT AAAACAATTA
GGCAAACTTA TTCAAGAACG GCTGTAA
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| Protein sequence | MKKYQQLAEQ LREQIASGIW QPGDRLPSLR DQVALSGMSF MTVSHAYQLL ESQGYIIARP
QSGYYVAPQA IKMPKAPVIP VTRDEAVDIN TYIFDMLQAS RDPSVVPFAS AFPDPRLFPL
QQLNRSLAQV SKTATAMSVI ENLPPGNAEL RQAIARRYAL QGITISPDEI AITAGALEAL
NLSLQVVTEP GDWVIVENPC FYGALQALER LRLKALSVAT DVKEGIDLQA LELALQEYPV
KACWLMTNSQ NPLGFTLTPQ KKAQLVALLN QYNVTLIEDD VYSELYFGRE KPLPAKAWDH
HDGVLHCSSF SKCLVPGFRI GWVAAGKHAR KIQRLQLMST LSTSSPMQLA LVDYLSTRRY
DAHLRRLRRQ LAERKQRAWQ ALLRYLPAEV KIHHNDSGYF LWLELPEPLD AGELSLVALT
HHISIAPGKM FSTGENWSRF FRFNTAWQWG EREEQAVKQL GKLIQERL
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