Gene SeSA_A1716 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSeSA_A1716 
Symbol 
ID6517225 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalmonella enterica subsp. enterica serovar Schwarzengrund str. CVM19633 
KingdomBacteria 
Replicon accessionNC_011094 
Strand
Start bp1659134 
End bp1660558 
Gene Length1425 bp 
Protein Length474 aa 
Translation table11 
GC content53% 
IMG OID642746820 
Productaminotransferase, classes I and II superfamily 
Protein accessionYP_002114623 
Protein GI194734457 
COG category[E] Amino acid transport and metabolism
[K] Transcription 
COG ID[COG1167] Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain (MocR family) and their eukaryotic orthologs 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones19 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAAAAAT ATCAACGTCT GGCGGAGCAA ATTAGAGAAC AAATCGCCTC TGGCGTTTGG 
CAGCCCGGCG ATCGATTACC CTCGCTGAGG GAGCAGGTCG CCAGTAGCGG CATGAGTTTT
ATGACTGTCG GTCATGCGTA CCAGTTGCTG GAAAGTCAGG GACGGATTAT CGCCCGTCCG
CAATCCGGTT ATTATGTCGC GCCGCATCCG GTTTGTCGGT CAGTCGCGAC GGCAGCGCAC
GTTATTCGGG ATGAAGCCGT AGATATCAAT ACCTATATTT TTGAGATGCT GCAGGCCAGC
CGTGATACCT CAGTGGTGCC TTTTGCTTCA GCGTTTCCCG ATCCGCGTCT GTTTCCCTTG
CCGCAATTGA ACCGATCTCT GGCGCAGGTC AGTAAAACCG CGACGGCAAT GAGCGTCATC
GAAAATTTGC CGCCAGGTAA TGCAGAATTG CGCTATGCAA TAGCACGCCG TTACGCGCAG
CAGGGGATTA CCGTTTCTCC TGACGAGATT GTCATTACCG CCGGCGCGCT GGAAGCGTTG
AATCTTAGTT TACAGGCGGT GACGGCACCG GGAGACTGGG TGGTGGTGGA GAACCCCTGT
TTCTACGGTG CGCTACAGGC CCTGGAGCGA TTGCGCCTGA AAGCGTTGTC GATACCCACC
GATGTTAAAG AAGGTATCGA TCTTATGGCG CTGGAACAAG CGTTACAGGA ATATCCGGTG
AAAGCGTGCT GGTTAATGAC CAACAGCCAG AATCCGTTAG GGTTCACGCT GAGCGCTGAG
AAAAAAGCGC GGCTGGTTGC GTTACTCACG CACCATAACG TGATGCTAAT TGAAGATGAT
GTTTATAGCG AACTCTACTT TGGCCGCGAG AAACCTCTGC CCGCCAAAGC ATGGGATCGC
GACGATACCG TGTTGCATTG TTCGTCTTTT TCCAAATGTC TGGTTCCCGG TTTTCGCATT
GGCTGGGTTG CGGGAGGAAG CCATGCCAGA CAAATTCAGC GTTTGCAGTT AATGAGCACA
TTATCCACCA GTTCCCCCAT GCAATTGGCG TTAGTGGATT ATCTCTCGAC ACGTCGATAT
GACGCGCATC TGCGCCGATT GCGAAGGCAG CTTGCCGAAC GTAAACAGCA AGCCTGGCAA
ACCCTTTTGC GCCATCTCCC GGCGGAAGTA AAAATTCACC ATAACGATAG CGGTTATTTT
CTTTGGCTGG AGCTACCTGA GCAGCTTGAT GCCGGTGAAC TTAGCGCCAA AGCGCTTGAA
CACCTTATCA GTATCGCGCC GGGGAAAATG TTTTCAACGT CCGGCGCCTG GACGCGTTTC
TTTCGTTTTA ACACCGCATG GCATTGGGGA GAACGGGAAG AACAGGCCGT AAAACAGCTT
GGCAGCCTGA TTCGCGAGAT GCTGCGCGCT AAAAGCCTTG TGTGA
 
Protein sequence
MKKYQRLAEQ IREQIASGVW QPGDRLPSLR EQVASSGMSF MTVGHAYQLL ESQGRIIARP 
QSGYYVAPHP VCRSVATAAH VIRDEAVDIN TYIFEMLQAS RDTSVVPFAS AFPDPRLFPL
PQLNRSLAQV SKTATAMSVI ENLPPGNAEL RYAIARRYAQ QGITVSPDEI VITAGALEAL
NLSLQAVTAP GDWVVVENPC FYGALQALER LRLKALSIPT DVKEGIDLMA LEQALQEYPV
KACWLMTNSQ NPLGFTLSAE KKARLVALLT HHNVMLIEDD VYSELYFGRE KPLPAKAWDR
DDTVLHCSSF SKCLVPGFRI GWVAGGSHAR QIQRLQLMST LSTSSPMQLA LVDYLSTRRY
DAHLRRLRRQ LAERKQQAWQ TLLRHLPAEV KIHHNDSGYF LWLELPEQLD AGELSAKALE
HLISIAPGKM FSTSGAWTRF FRFNTAWHWG EREEQAVKQL GSLIREMLRA KSLV