Gene M446_3848 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagM446_3848 
Symbol 
ID6132068 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethylobacterium sp. 4-46 
KingdomBacteria 
Replicon accessionNC_010511 
Strand
Start bp4287991 
End bp4289382 
Gene Length1392 bp 
Protein Length463 aa 
Translation table11 
GC content60% 
IMG OID641644014 
Producttranscriptional regulator 
Protein accessionYP_001770656 
Protein GI170742001 
COG category[E] Amino acid transport and metabolism
[K] Transcription 
COG ID[COG1167] Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain (MocR family) and their eukaryotic orthologs 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones54 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCCTCGG AGAAGACCAA GTTTTTCGGC TGGCTGCCCC GGGAGCTGTC GTCGGAAGGT 
CCGCGCTACC TTGCTCTGGT AAATGCGCTT GAGCAGGACG TCGTGGAGAA CCGTCTAGTC
GACGGCTCGC GCCTCCCGCC GCACCGTGAA CTGGCTGCGC AGATCGGATT ATCAGTTGGT
ACTGTCAGCA AAGCATATCA AGAGGCGGAG CAACGGGGCA TCGTCAGCAG CCATGTCGGG
CAGGGGACTT TTGTGCGCAG GCGCGCATCG ACCGTCCCAA TCGGCGCGGC CGCGCCGCAA
GCCGTGAACA TGGCCCTCAA TGTGCCAGCT CATGGTCGCG AGGCGGATGT TCTCTCTGGG
CTCCTGAGCG ATGTCTACCG TCCCCAAGAA CTAGCGCCAC TACTCGATTA TCATCCCCAT
TCAGGCATCG GGCATCATCG CGAAGTCATT GCCCGCTCCA TTTCGGATGA TGCGTTCAGC
GTTGATCCCG CGCTGCTGTA TCTGTGCAAC GGCGCTCAGC ATGCCCTCGA CATTGCCGTG
CGTCTCGTGG CACAGCCAGG CGACAAGATA CTCGTCGATC GGCTCACCTA CTCGGGCTTC
AAGGCGATCG CAGTCGCGAA CTCACTCACG CTCGTGCCGG TTGATCTTGA TGATGAAGGC
ACCGATCCTG ACGCCTTGGA GGCAGCGTGC CGGCTTTCTG GTGCCCGCGT CTATTACTCT
ATGCCGACTC TACAAAGTCC GACAGCGCGG ACCATGAGTC TCCAGCGACG AAAGCGCATT
GCCGAATTGG CCGAAAAACT TGACCTCCTC ATTATTGAGG ACGACGTCTA CAGTTTCTTC
TATCCTGAAA GGCCGCTTCC GATCGCGGCG CTCGTGCCCG AAAGAAGTTT CTATGCAACG
TCTTATTCTA AGTGTGTCGC ACCGGGTTTT CGGCTCGGAA CACTCTCGGT TCCTCCCGCG
TTCAAGGGTC GGGCTGAATT ATTTGTCCAC GCCTCCTCAT GGTTCGCTGC ACCCATCTTG
GGTGACCTGG CGGTTCGTCT TCTCGAGAGC GGCAGGCTCG ATGAGCTGAT TCGTGAGCGG
AGGCGGCAGG CAACCGAGCG GTATCGTCTC TTCGCGAAGT TCTTTCCGTT TGTGGAGAAG
CTGGACAATC CCCCTTTCTA CGCCTGGCTG CCCTTGCCGC AGGAATGGTC CGCATCGCGT
TTCACTTCGG CGGCACGCGG GCAGGGCATC CTCGTAACGC CTCCGACCGC CTCCACTGTT
GATGACGACG ATCCGGGCGC CGTTCGCGTG TGCCTAGGTG CGCCAGACGA TCTAAGCGAG
CTTTCCGGTG CTCTCTCCAT CCTTAGCGAG ATCCTTGCTC GGCCACCTCT GAGCGTCTTC
TCTGTCGCTT GA
 
Protein sequence
MASEKTKFFG WLPRELSSEG PRYLALVNAL EQDVVENRLV DGSRLPPHRE LAAQIGLSVG 
TVSKAYQEAE QRGIVSSHVG QGTFVRRRAS TVPIGAAAPQ AVNMALNVPA HGREADVLSG
LLSDVYRPQE LAPLLDYHPH SGIGHHREVI ARSISDDAFS VDPALLYLCN GAQHALDIAV
RLVAQPGDKI LVDRLTYSGF KAIAVANSLT LVPVDLDDEG TDPDALEAAC RLSGARVYYS
MPTLQSPTAR TMSLQRRKRI AELAEKLDLL IIEDDVYSFF YPERPLPIAA LVPERSFYAT
SYSKCVAPGF RLGTLSVPPA FKGRAELFVH ASSWFAAPIL GDLAVRLLES GRLDELIRER
RRQATERYRL FAKFFPFVEK LDNPPFYAWL PLPQEWSASR FTSAARGQGI LVTPPTASTV
DDDDPGAVRV CLGAPDDLSE LSGALSILSE ILARPPLSVF SVA