Gene VIBHAR_01894 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagVIBHAR_01894 
Symbol 
ID5553492 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameVibrio harveyi ATCC BAA-1116 
KingdomBacteria 
Replicon accessionNC_009783 
Strand
Start bp1905979 
End bp1907370 
Gene Length1392 bp 
Protein Length463 aa 
Translation table11 
GC content47% 
IMG OID640907382 
Producthypothetical protein 
Protein accessionYP_001445087 
Protein GI156974180 
COG category[E] Amino acid transport and metabolism
[K] Transcription 
COG ID[COG1167] Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain (MocR family) and their eukaryotic orthologs 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAACCGAT ACCGCCAATT GGCTGAGCTG TTTAAAACTC AGATCCAGCA AAATACATGG 
AGAGCAGGAG AAAAACTGCC ATCTGTTCGT GTAACGAGTC GCAGCCATTC AGTCAGTACT
GGGACAGTAT TGCAAGCTTA TCAATTGCTA GAAGCTCAAG GTTGGGTGAC GGCAAAACCG
CAATCAGGGT ACTTTGTTAC CGCTGATCTC GAACGATTGG AAGTTTCAAC GTCAGAAAGT
CATCCGCTGC GAGTGTCGGT TAATGATGAG TTGTATGATT TTCTTAAACA TCAAGCGTCG
CCAGAGGCAA TAAAACTTGG ATCTGCTTTT CCCGAACCGA CTTTGTTTCC GTTAGACGCA
TTAAACCGCA ACCTTGCCAG CTCTGGGCGG AAAATGGGGC CAGACACCTT GCTGGATAAT
CTTCCCCCAG GTAGCGAGTC ACTCCGCCGC TTGATTGCTC AGCGCTACAT TCAGCAGGGC
ATGAACTTAA CTCACGATGA CATTGTGATC ACCTCGGGAG CGTTAGAAGC GCTCAACCTT
AGCCTGCAAG CCGTTACTCA ACCCGGCGAT ATTGTAGTCG TTGAGTCACC GACTTTTTAT
GGTGCGCTAC AAGCGATTGA ACGGCTCGGT TTGAAGGCGA TAGAAGTTCG CGTGGATGCT
AAGAAAGGCC ATTCATTAAC TCAATTAGAA AGTCTGTTTG AGCAGCACGA TGTGAAAGCA
TGTTGGCTCA TGACTAACTT CCACAATCCG ACAGGTACAT CGCTTAGTGA CGAGGAAAAA
CATCGTGTTG TCGATCTTGC TAATCAGCAC GATGTGTATC TAATCGAAGA TGACGCTTAT
GCTGAGCTGT ACTTTGGTGA GAAGAAGCCA ATGTCACTTA AAAGCTTTGA TACTCACGAG
CGAGTGCTCC ACTGTGGTTC ATTATCAAAA AGCCTTTGTC CAGGTTATCG TTTAGGTTGG
GTAATCAACA AACGCTTCAA TGAGCCGATT CAAAAGTTGC AATTGATGTC GACTTTGTCA
GGCAGCGCTC CTATTCAACA AGGCGTGGCG CATTACCTCC AAAATGATAG TTACGATAAC
CATCTAAGAA AGCTGCGTAA AACGCTCCAG CAGCGCCAAC AACGATTTAT TGCTCTTCTT
GAACAGCATC TTCCCGCGCA AGTTGATTTC TATGTACCGC AAGGTGGGTA TTTTCTGTGG
TTGACACTGC CAAAAGGCAT CAGTAGCAAA GTGCTCTATC ACGCGTTGCT CGCTGAACAG
GTGACCATTG CTCATGGCAA GTTGTTCTCC TTGGTTGCAC AGCTTGAAAA CTGTCTGCGG
CTTAATACCT CTTTAGCGAT GGATGAGCAC GTTGAACAAG CCATTCGCAA ATTGAGTGAT
TTACTTCGCT AA
 
Protein sequence
MNRYRQLAEL FKTQIQQNTW RAGEKLPSVR VTSRSHSVST GTVLQAYQLL EAQGWVTAKP 
QSGYFVTADL ERLEVSTSES HPLRVSVNDE LYDFLKHQAS PEAIKLGSAF PEPTLFPLDA
LNRNLASSGR KMGPDTLLDN LPPGSESLRR LIAQRYIQQG MNLTHDDIVI TSGALEALNL
SLQAVTQPGD IVVVESPTFY GALQAIERLG LKAIEVRVDA KKGHSLTQLE SLFEQHDVKA
CWLMTNFHNP TGTSLSDEEK HRVVDLANQH DVYLIEDDAY AELYFGEKKP MSLKSFDTHE
RVLHCGSLSK SLCPGYRLGW VINKRFNEPI QKLQLMSTLS GSAPIQQGVA HYLQNDSYDN
HLRKLRKTLQ QRQQRFIALL EQHLPAQVDF YVPQGGYFLW LTLPKGISSK VLYHALLAEQ
VTIAHGKLFS LVAQLENCLR LNTSLAMDEH VEQAIRKLSD LLR