| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | SeAg_B2581 |
|---|
| Symbol | |
|---|
| ID | 6796604 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Salmonella enterica subsp. enterica serovar Agona str. SL483 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011149 |
|---|
| Strand | + |
|---|
| Start bp | 2509858 |
|---|
| End bp | 2511150 |
|---|
| Gene Length | 1293 bp |
|---|
| Protein Length | 430 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 59% |
|---|
| IMG OID | 642776773 |
|---|
| Product | GntR-family transcriptional regulator |
|---|
| Protein accession | YP_002147390 |
|---|
| Protein GI | 197250424 |
|---|
| COG category | [E] Amino acid transport and metabolism
[K] Transcription |
|---|
| COG ID | [COG1167] Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain (MocR family) and their eukaryotic orthologs |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 25 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGATCGACG GAAAAACCGC TAACGAAATT TTTGACAGTA TCCGTCAACA CATTATCGCC
GGCACGTTAC GGGCGGAGGA TTCGCTCCCG CCGGTACGGG AGCTGGCAAG CGAATTAAAG
GTGAACCGCA ATACCGTCGC AGCGGCGTAT AAACGGCTGA TAACGGCGGG ACTGGCGCAA
AGTTTAGGCC GCAATGGGAC GGTGATTAAA GGCAGTCCGT CTCCCGTAGC GCTGGAAGGC
GGCGATCCGC ATACGCCTCT GCACGACCTT TCCGGCGGCA ATCCCGATCC GCAGCGTCTG
CCTGACCTTA GCCGTTATTT TGCCCGTCTC AGCCGCACGC CGCATCTCTA CGGCGATGCG
CCCATTTCCC CTGAACTACA CGCCTGGGCG GCGCGCTGGC TACGGGATGC CACCCCCGTC
GCAGGCGAAA TTGATATCAC CAGCGGAGCT ATCGACGCTA TCGAAAGACT GCTTTGCGCG
CATCTGCTGC CGGGCGACAG CGTCGCGGTG GAAGATCCCT GTTTTTTAAG CAGTATCAAT
ATGCTGCGCT ATGCCGGTTT TAGCGCCAGC CCGGTCAGTG TGGATAGCGA AGGAATGCAG
CCTGAAAAGC TGGAACAGGC GCTAAACCAG GGCGCGCGGG CAGTGATCTT AACGCCGCGC
GCACACAACC CTACCGGCTG TAGCCTGAGC GCTCGCCGTG CCGCTGCGCT GCAAAATATA
CTGGCGCGTT ACCCTCAGGT AGTGGTCATT ATCGACGATC ACTTCGCCCT GCTTTCTTCG
TCGCCCTGGC AGCCGGTTAT TGCGCAGACA ACGCAACACT GGGCGGTGAT ACGCTCCGTT
TCCAAAGCCC TCGGCCCCGA TTTACGTCTT GCTATTGTCG CCAGCGACAG CGCGACCTCG
GCAAAACTTC GGCTGCGACT AAATGCCGGT AGTCAGTGGG TCAGCCATCT GTTACAGGAT
CTGGTCTACG CCTGCCTGAC CGACCCTGAG TATCAGCACA GGCTGACGCA AACGCGGCTG
TTTTACGCCG CCCGGCAACA AAAACTGGCC CGCGCCCTAC AGCAATATGG CATCGCCATT
TCTCCCGGCG ACGGCGTGAA TGCCTGGCTC CCACTGGACA CCCATAGCCA GGCTACCGCG
TTTACGCTGG CAAAATCCGG CTGGCTGGTA CGTGAAGGAG AAGCCTTTGG CGTAAGCGCG
CCGTCTCACG GTCTACGTAT CACGCTGTCG ACATTAAATG ACGGCGAGAT CAACACGCTG
GCGGCTGATA TCCATCAGGC GCTAAATCGC TAA
|
|---|
| Protein sequence | MIDGKTANEI FDSIRQHIIA GTLRAEDSLP PVRELASELK VNRNTVAAAY KRLITAGLAQ
SLGRNGTVIK GSPSPVALEG GDPHTPLHDL SGGNPDPQRL PDLSRYFARL SRTPHLYGDA
PISPELHAWA ARWLRDATPV AGEIDITSGA IDAIERLLCA HLLPGDSVAV EDPCFLSSIN
MLRYAGFSAS PVSVDSEGMQ PEKLEQALNQ GARAVILTPR AHNPTGCSLS ARRAAALQNI
LARYPQVVVI IDDHFALLSS SPWQPVIAQT TQHWAVIRSV SKALGPDLRL AIVASDSATS
AKLRLRLNAG SQWVSHLLQD LVYACLTDPE YQHRLTQTRL FYAARQQKLA RALQQYGIAI
SPGDGVNAWL PLDTHSQATA FTLAKSGWLV REGEAFGVSA PSHGLRITLS TLNDGEINTL
AADIHQALNR
|
|---|
| |