| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swoo_1939 |
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| Symbol | |
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| ID | 6116202 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella woodyi ATCC 51908 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010506 |
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| Strand | + |
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| Start bp | 2385969 |
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| End bp | 2387399 |
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| Gene Length | 1431 bp |
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| Protein Length | 476 aa |
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| Translation table | 11 |
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| GC content | 43% |
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| IMG OID | 641633442 |
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| Product | transcriptional regulator |
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| Protein accession | YP_001760318 |
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| Protein GI | 170726292 |
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| COG category | [E] Amino acid transport and metabolism
[K] Transcription |
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| COG ID | [COG1167] Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain (MocR family) and their eukaryotic orthologs |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 6 |
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| Plasmid unclonability p-value | 0.0234327 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 8 |
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| Fosmid unclonability p-value | 0.0215976 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCCTATTA AGAAATATCA ACTGGTTGCG GACACGATTT CCCAGCAGAT CTTGACTGGT
TATTTTCAAC CTGGAGAGAA AATCCCTTCA GTTAGAGCAA GCTGTGAACA GTTTCATGTC
AGTATGACAA CGGTACAAGC GGCGTATGAG ATCCTTGAAG ATAATGGCTT AGTGGCAAGT
AGGCCAAGTT CCGGTTACTT TGTTTCTCGT TTAGCCGATA CCGAGCACTT AACGCCAATA
AAGCCACAGG GGATCTCCGT TTATAACCGC ATGATATCTG TGCTGAATGA TTGTCATAAA
GAGGGGGTGA TAAACCTAGG TACCGCGGTC GTATCACCCT CACTGCTTCC CACTCATCAA
ATTAAGAAAA TCCTGAATAA GCTGACTCGC GATCATATGC TTGAATTAGT CACGCCTGAG
TTTTCATCAG GTTATCCGCG CTTAAGAAGG GAGTTCGCTA AACGAATGCT CAATGTGAAT
GTTGAAGTAC ACCCTGATGA TATCTTGGTT ACTGGTGGCT GCCAGGATGC GATCGCATTA
GCATTAAGTG CAGTGGCAAA TGCAGGTGAT GTCATCGCTG TTGAAAGTCC ATGTTTTCCA
GGATTATTAC AAGTGATTGA ATCACTTGAT ATGAAGGCGT TGCCACTTCC TTGCTCGGGG
AGCTTAGGGA TGAAGCCTGA TACATTACAA GATGCGCTTC AGTCTTGGCC TATATCAGCC
ATAGTGCTTG TTCCCTCATT CAGTAACCCT ACCGGGAGTC TTATGCCGAT AGAGAGTAGA
AAGAGGGTGA TAGCCTTAGT AGAGGAGTAT GATATTGCGC TTATTGAAGA TGACCTTTTC
TCTGAGCTTA ACTATCAAGA TAAACCTGTA CCAGCTATCA AGTCATTAGA GAGAAAGGGG
AATGTGATCT ATTGCTCCTC AGTTTCTAAA TCATTAGGCT CAGGCTTTAG GTTGGGCTGG
TTATGCGGTG GAAAGTATCA TAGCAAGATT ATGAAATTAA AAGCTTTTAG GAATGTATCC
GAACCTTTGA TTATTCAGAT GTTGATAGCT GAATTGATGA AACAGGGCGG ATATAGTAAA
CACCTTAAAA AACTGAAAAT AGCCTTACAT CAAAATCAAA AATTGATGCA AAGCTGTATC
AAAAAATCCT TCCCTAAAGG GACACTGGTG AACTCTTGTG ATGGTGGTTA TGTCCTGTGG
GTGCAACTTC CTGATCTTTG TGACTCAAGA GAGTTGTTTA CGCAAGCCAT TAAAAGTGGA
GTTGCATTTT TCCCTGGGGA TGTGTTTTCT CCCCATGAGC ACTACCTTAG TTACATCAGG
TTTAACTTAG CTGTGAAATG GTGTCAGGAG ATTGAGCAAG CCGTTATAAG TTTAGGTAAG
CTGGTTAAGC TGCAGTTAGA GCGAAGTGCA GCTCAGCTAC CGATAGACTG A
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| Protein sequence | MPIKKYQLVA DTISQQILTG YFQPGEKIPS VRASCEQFHV SMTTVQAAYE ILEDNGLVAS
RPSSGYFVSR LADTEHLTPI KPQGISVYNR MISVLNDCHK EGVINLGTAV VSPSLLPTHQ
IKKILNKLTR DHMLELVTPE FSSGYPRLRR EFAKRMLNVN VEVHPDDILV TGGCQDAIAL
ALSAVANAGD VIAVESPCFP GLLQVIESLD MKALPLPCSG SLGMKPDTLQ DALQSWPISA
IVLVPSFSNP TGSLMPIESR KRVIALVEEY DIALIEDDLF SELNYQDKPV PAIKSLERKG
NVIYCSSVSK SLGSGFRLGW LCGGKYHSKI MKLKAFRNVS EPLIIQMLIA ELMKQGGYSK
HLKKLKIALH QNQKLMQSCI KKSFPKGTLV NSCDGGYVLW VQLPDLCDSR ELFTQAIKSG
VAFFPGDVFS PHEHYLSYIR FNLAVKWCQE IEQAVISLGK LVKLQLERSA AQLPID
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