| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dbac_0439 |
|---|
| Symbol | |
|---|
| ID | 8376088 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Desulfomicrobium baculatum DSM 4028 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013173 |
|---|
| Strand | + |
|---|
| Start bp | 517079 |
|---|
| End bp | 518632 |
|---|
| Gene Length | 1554 bp |
|---|
| Protein Length | 517 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 67% |
|---|
| IMG OID | 644999680 |
|---|
| Product | transcriptional regulator, GntR family with aminotransferase domain protein |
|---|
| Protein accession | YP_003156981 |
|---|
| Protein GI | 256828253 |
|---|
| COG category | [E] Amino acid transport and metabolism
[K] Transcription |
|---|
| COG ID | [COG1167] Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain (MocR family) and their eukaryotic orthologs |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 21 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGCGCCTGG CACTGGATTC TGATTCCTCC GAGCCCGTTT ACGCCCAGAT CAGTGGCCAT
TTCCGCCACA GCATCCTGTC CGACAACCTG CGGCCCGGGG TCCGGTTGCC TGCGGTCCGC
GTCCTGGCCG CGAATCTGGG CGTGAGCCGG GGCACGGTGG AGAGCGCCTA CGCCGAACTT
CTGGCCGAGG GGCTGATCAC TTCCCGGCAG GGCAGCGGCT TTTATGTGCT GCCCCATGCA
CCGGGCGAAA CCGGCGGTTT CCCCCGCGCC GGTGGGTGGC CCGCCTGGCA GGACCGTCTG
CGCTATGGCG GCTTCGAGGC CATGAGCGCC TATCTGCCGG AGGTCAGCCG CCAAACGGAC
TGGATCGCCC TGGACGGCGG GGCCTGCGAT CCGCGCCTTT TTCCCATGGA CGAGTTCAGA
AGGCTTCTGG GGCAGGTCAT GCGCCGGGAC GGGGCGGCGG CCGTGGAGTA CGGGGAGATC
GCCGGATTCG GGCCCCTGCG CGCCACCCTG GCCCAGGTTC TGGCCAGCCA GGGCATCCAG
ACCGGGCCCG GCAATATTCT GATCACCGCC GGGTCCCAGC AGGCCCTTTC CCTGGTTGCC
GGACTGATCC TGCCGCCCGG ATCAAGCGTG GTCGTGGAGC GTCCGACCTA TGCCGGGGCC
CTGGACGTGT TCCGCTCCCG GAACCTGCGC ATTCACACCG TGGGCCTGGA CGAGGACGGC
CTGGACGTGG ACGAGCTGGA AGGGATTCTG CGCCGCCATA AGCCCGGGCT CATCTATACC
ATACCCAATT TTCACAACCC CACGGGCGCC TGCCTCAGCG GTCAGCGCCG CAGGCAGCTG
ATCAGTCTGG CCGGACGCTT CGACGTGCCG GTCCTGGAAG ACGATTATGT CGGCGACATC
CGCTACGAGG GACATGTCCA GCCGACGCTC AAGTCTCTCG ATCCGGACGG GCGGGTCATC
TACATGAGCA CCTTTTCCAA GATGCTCATC CCCGGCCTGC GCGTGGGTTT CGTGGTCGCC
GACGGCCCGG TCTACGCCCA TCTGCTGCGT TCCAAACGCT GCCACGATCT GGCCACCTGC
AACCTGATCC AGCGGGCGCT CAAGGATTAC GTGTCCGTGG GTCGCTATGC CGCCCACCTG
CAACGCTCCT GCACCCTCTA CCGCCGTCGT CGGGACGCCA TGCTCGCGGC CCTGGAGCGG
CACATGCCGT CCGGTACACG TTGGACGCGG CCCAAGGGAG GGCTTTTCGT GTGGGTCAAT
CTGCCGGAAG GAACGAAGGC CTCCGACCTG CTGCCCAAGG CCTGCGGGAA AGGCGTGATT
TTCGCGCCGG GGGGAAATTT CCATCTCGAT CCCGCCCAGG GCGAAGGGTT CATGCGGCTC
AATTTCGCCT CCAACAGCGA GGAGATCATC GAAGAGGGGA TCAGGAGGCT GGGGAGGGCG
ATGGGGGGCA GGGCGGACAC GTTGGGCAGG GCGGACACGT TGGGCAGGGC GGACACGTTG
GGCAGGGCGG ACACGTTGGG CAGGGCGGAC ACGTTGGGCA GGGCGGACAC GTAG
|
|---|
| Protein sequence | MRLALDSDSS EPVYAQISGH FRHSILSDNL RPGVRLPAVR VLAANLGVSR GTVESAYAEL
LAEGLITSRQ GSGFYVLPHA PGETGGFPRA GGWPAWQDRL RYGGFEAMSA YLPEVSRQTD
WIALDGGACD PRLFPMDEFR RLLGQVMRRD GAAAVEYGEI AGFGPLRATL AQVLASQGIQ
TGPGNILITA GSQQALSLVA GLILPPGSSV VVERPTYAGA LDVFRSRNLR IHTVGLDEDG
LDVDELEGIL RRHKPGLIYT IPNFHNPTGA CLSGQRRRQL ISLAGRFDVP VLEDDYVGDI
RYEGHVQPTL KSLDPDGRVI YMSTFSKMLI PGLRVGFVVA DGPVYAHLLR SKRCHDLATC
NLIQRALKDY VSVGRYAAHL QRSCTLYRRR RDAMLAALER HMPSGTRWTR PKGGLFVWVN
LPEGTKASDL LPKACGKGVI FAPGGNFHLD PAQGEGFMRL NFASNSEEII EEGIRRLGRA
MGGRADTLGR ADTLGRADTL GRADTLGRAD TLGRADT
|
|---|
| |