| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tpau_0837 |
|---|
| Symbol | |
|---|
| ID | 9154977 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Tsukamurella paurometabola DSM 20162 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_014158 |
|---|
| Strand | - |
|---|
| Start bp | 845546 |
|---|
| End bp | 846934 |
|---|
| Gene Length | 1389 bp |
|---|
| Protein Length | 462 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 71% |
|---|
| IMG OID | |
|---|
| Product | transcriptional regulator, GntR family with aminotransferase domain |
|---|
| Protein accession | YP_003645812 |
|---|
| Protein GI | 296138569 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 11 |
|---|
| Plasmid unclonability p-value | 0.439147 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGATAAAT CTCCGGCCGA CCCCCCGCGT CCCACGCCGG CCATCCACAT CGACGACCCC
TCGCCCGCCG GGATCGCCGG CGCGATCGCG CGGATGATCA ACACCGGCGA ACTACTGCCG
GGCGACCGGC TCCCGACGGT GCGCACCCTC GCCCGGGAGC TGGGCGTCTC ACCGGCGACG
ATCAGCCACG GGTGGCAGGC ACTGGCACGG TCGGGCCTCG TCGTATCACG AGGCCGCAGT
GGCACTTTCG TCGCTGACGG AGCCGCCCGG CGTCCGGCCC CATCATCGAG GACGGGTGCC
ATGGCGGGCC GGCACGGCGA TGTGCGATGG GATCTGTCCC TCGGTGCACC CGATCCGCAG
TTGCTCCCGG AGATCGCACA CTCGCTGGCC GCCGTGGCTC GCCGGGGCGA AACCACGAAC
TATCACGAGC ATCCGGTGGT GCCCGAACTC GGGGCGCTCC TGAGCGCCAC CTGGCCGACC
ACCTCGGAAG CCCTCACCAT CGTCGACGGT GCGCTCGATG CGGTGGTGCG CGCGCTCGAT
GCCACCACGC GCTACGGCGA CCGGGTGATC GTGGAGAACC CCACCTTCCC GCAATTCCTC
GACCTCGTGG AGATCAACGG CCTCGAGGCC CTCCCCGTCG AACTCGACGA CGAGGGCGTC
CGGCCCGACG CGTTCGCGCG CGCCCTCGCC CAGGGACCGT CCGCCGCGAT CATTCAGCCC
CGTGCGCACA ATCCCACCGG GCGATCGATG TCGCCGGACC GCGCGAAGGA ACTCGTGCGC
CTGCTCCGCG GCAACTCCCA GTGCATGGTG ATCGAGGACG ACCACTCCGG CTCGGTGGTC
ACTGCGCCGG ACCTCAGCCT GGGGCGCTGG ATCCCCGATC GGGTGCTGCA CATTCGCAGC
TTCTCCAAAT CGCACGGACC GGATCTGCGA ATCGCCGCCA TGTCCGGTCC GGCCGAGGTG
ATCAACCGCG TGGTGACGCG GCGCTCACTC GGCCCCGGCT GGACCCCGCG GATCCTGCAG
CGCCTGCTGT ACGACCTGCT CTCCGACGCC ACCGCGGAGC GCACGGTCGC CCGGGCCCGC
GAACAGTACC GCCGGCGTCG GGACGCGCTG CTCCCCGCAC TCGGGGGGAT CGACGCCGGC
GTGGCGACGG CCGAGGGCCT GAACCTGTGG ATCCCCGTCG ACGACGAACG GCGCGCCCTG
ATCCACCTGG CGGCGGAAGG CATCCGGGTG GCTCCCGGAA CCCCGTTCGT GGTGGGAACG
CCGGAGACGG ACCATATCCG GGTCACGATC GCACCGCTCG ACACCGAGTT CGACGATGTC
GGGCGTGCCG TGGCCACCGC CGCGGCCCCG TTCAAACGCG ACGAGTTCTA CGCGCTGCGC
GGCCTGTGA
|
|---|
| Protein sequence | MDKSPADPPR PTPAIHIDDP SPAGIAGAIA RMINTGELLP GDRLPTVRTL ARELGVSPAT
ISHGWQALAR SGLVVSRGRS GTFVADGAAR RPAPSSRTGA MAGRHGDVRW DLSLGAPDPQ
LLPEIAHSLA AVARRGETTN YHEHPVVPEL GALLSATWPT TSEALTIVDG ALDAVVRALD
ATTRYGDRVI VENPTFPQFL DLVEINGLEA LPVELDDEGV RPDAFARALA QGPSAAIIQP
RAHNPTGRSM SPDRAKELVR LLRGNSQCMV IEDDHSGSVV TAPDLSLGRW IPDRVLHIRS
FSKSHGPDLR IAAMSGPAEV INRVVTRRSL GPGWTPRILQ RLLYDLLSDA TAERTVARAR
EQYRRRRDAL LPALGGIDAG VATAEGLNLW IPVDDERRAL IHLAAEGIRV APGTPFVVGT
PETDHIRVTI APLDTEFDDV GRAVATAAAP FKRDEFYALR GL
|
|---|
| |