| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Noca_1688 |
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| Symbol | |
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| ID | 4599727 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Nocardioides sp. JS614 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008699 |
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| Strand | + |
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| Start bp | 1794738 |
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| End bp | 1796213 |
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| Gene Length | 1476 bp |
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| Protein Length | 491 aa |
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| Translation table | 11 |
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| GC content | 77% |
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| IMG OID | 639776287 |
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| Product | GntR family transcriptional regulator |
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| Protein accession | YP_922888 |
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| Protein GI | 119715923 |
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| COG category | [E] Amino acid transport and metabolism
[K] Transcription |
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| COG ID | [COG1167] Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain (MocR family) and their eukaryotic orthologs |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 0.82306 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGACCTGC CGGTCGACCT GGACGCGCGC GCCGACCGGG CGAGCGCGAT CTATCGCGCG
CTGCTCGAGG CGATCCGCGC CGGCCGGGTC GGTGCCGGTG ACCGGCTGCC GCCGACCCGC
ACCCTGGCCC GCGACCTGGG GGTCGCGCGC AACACGGTTG CCACCGCGTA CGAGCGGCTC
GCCGCCGAGG GCCTCCTCGA CGCCCGCGTG GGCGCGGGCA CCTACGTCAC CGACCTGGCC
GCGCCGGTGC CGGCGCCGCG CCGCCCCGGC TCGCTGCACC CACGGGCCGG CTGGTCGTTC
CGGCCGCTGC CGGTGAGCGG CGAGCAGCCG GCACCGCCGT ACGACTTCCG GGTCGGCATC
CCCGACGCGT CGCTGTTCCC GTTCGACACC TGGCGTCGAC TGGTGGCCGC GGAGCTCCGC
GCCGGGGCGC ACCGCCCGGG CACCTACGCC CACCCAGCGG GCCTGCCGCA GCTGCGGGCC
GCCATCGTCC GCTACCTCGC CCTGGCCCGC GGCGTCGCAG CCGAGGCCGA CGACGTCGTG
GTGACCCACG GCACCCAGCA GGCCCTCGAC CTGGTCGCCC GGGTGCTGCT CGAGCCAGGC
GACGTCGTCG CGGTCGAGGA CCCCGGCTAC CCGTTCGCGC GCGAGCTGTT CGCGTCGCAC
GGCGCCCGCG TGGTGCCCGT CCCGGTCGAC GCGGAGGGCC TGGTCGTCGA GCGGGTCCCG
GAGCGGGCCC GGCTGGTGTT CAGCACCCCC TCACACCAGT TCCCGCTCGG TCCGCCGCTC
TCGCTGGCCC GGCGCCAGGC GCTGCTCGAG CTCGCCAACC GACACCGGGT CGCGATCGTC
GAGGACGACT ACGACAGCGA GTTCCGGTTC ACCGATCGCC CGCTCGAGAC GCTGCACGCG
ATGGACCGGC ACGGCCGGGT CGTCTACGTC GGCACCTTCT CGAAGTCGCT GCTCCCGGCC
CTGCGGGCGG GCTACCTGGT CGCTCCCGAG CCGCTGCGCG AGGCGCTGCT CGGGGCCCGC
CAGCTGGCGG ACGGCCACGG CGGTCCGGCC GAGCAGGCCG CGCTCGCCCA CTTCGTGGCC
GACGGGCTCC TCGCCCGGCA CCTCAGGCGG GCTCGGGCGA CGTACGCCGA GCGTCGCGAG
CTGGTCCGGT CCGGGCTGGA GCGGCTGCTC GCGGACCGCC TCGAGGTGGT CCCGTCGGCA
GCCGGCCTGC ACGTCGCCGC CACGTTCCGC GACGCCGAGG TCGACGACGC GGCGGTCGCG
GAGGCGGCGC TGGCGGCCGG CGTCGCGGTC GAGCCGCTCT CGGCGTACGC CGTCGGGCCG
GACGTCCCGC CGGGCCTGGT GCTCGGCTAC GGCGCCGCAG GCACCGCCAC GATCAGGCCG
GGTCTGGAGC GGCTCGCCCG GCTCGTCGCG TCCACGCCAT CCAGGCCACC GCGGCCGCGC
CGACCAGGAG CTGCGGCAGC AGGTAGCGCC CGGTGA
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| Protein sequence | MDLPVDLDAR ADRASAIYRA LLEAIRAGRV GAGDRLPPTR TLARDLGVAR NTVATAYERL
AAEGLLDARV GAGTYVTDLA APVPAPRRPG SLHPRAGWSF RPLPVSGEQP APPYDFRVGI
PDASLFPFDT WRRLVAAELR AGAHRPGTYA HPAGLPQLRA AIVRYLALAR GVAAEADDVV
VTHGTQQALD LVARVLLEPG DVVAVEDPGY PFARELFASH GARVVPVPVD AEGLVVERVP
ERARLVFSTP SHQFPLGPPL SLARRQALLE LANRHRVAIV EDDYDSEFRF TDRPLETLHA
MDRHGRVVYV GTFSKSLLPA LRAGYLVAPE PLREALLGAR QLADGHGGPA EQAALAHFVA
DGLLARHLRR ARATYAERRE LVRSGLERLL ADRLEVVPSA AGLHVAATFR DAEVDDAAVA
EAALAAGVAV EPLSAYAVGP DVPPGLVLGY GAAGTATIRP GLERLARLVA STPSRPPRPR
RPGAAAAGSA R
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