| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | SeSA_A2672 |
|---|
| Symbol | |
|---|
| ID | 6516466 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Salmonella enterica subsp. enterica serovar Schwarzengrund str. CVM19633 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011094 |
|---|
| Strand | + |
|---|
| Start bp | 2551354 |
|---|
| End bp | 2552646 |
|---|
| Gene Length | 1293 bp |
|---|
| Protein Length | 430 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 58% |
|---|
| IMG OID | 642747718 |
|---|
| Product | GntR-family transcriptional regulator |
|---|
| Protein accession | YP_002115503 |
|---|
| Protein GI | 194734061 |
|---|
| COG category | [E] Amino acid transport and metabolism
[K] Transcription |
|---|
| COG ID | [COG1167] Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain (MocR family) and their eukaryotic orthologs |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 11 |
|---|
| Plasmid unclonability p-value | 0.562569 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 28 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGATCGACG GAAAAACCGC TAACGAAATT TTTGACAGTA TCCGTCAACA CATTATTGCC
GGCACGTTAC GGGCAGAGGA TTCGCTCCCG CCGGTACGGG AGCTGGCAAA CGAATTAAAG
GTGAACCGCA ATACCGTCGC AGCGGCGTAT AAACGGCTGA TAACGGCGGG ACTGGCGCAA
AGTTTAGGCC GCAATGGGAC GGTGATTAAA GGCAGTCCGT CTCCCGTAGC GCTGGAAGGC
GGCGATCCGC ATACGCCTCT GCACGACCTT TCCGGCGGCA ATCCCGATCC GCAGCGTCTG
CCTGACCTCA GCCATTATTT TGCCCGTCTC AACCGCACGC CGCATCTCTA CGGCGATGCG
CCCGTTTCCC CTGAACTACA CGCCTGGGCG GCGCGCTGGC TACGGGATGC CACTCCCGTC
GCAGGCGAAA TTGATATCAC CAGCGGAGCT ATCGACGCTA TCGAAAGACT GCTTTGCGCG
CATCTGCTGC CGGGCGACAG CGTCGCGGTG GAAGATCCCT GTTTTTTAAG CAGTATCAAT
ATGCTGCGCT ATGCCGGTTT TAGCGCCAGC CCGGTCAGCG TAGATAGCGA AGGAATGCAG
CCTGAAAAGC TGGAGCAGGC GCTAAATCAG GGCGCGCGGG CAGTGATCTT AACGCCGCGC
GCGCATAACC CTACCGGCTG TAGTCTGAGC GCTCGCCGTG CCGCTGCGCT GCAAAATATA
CTGGCGCGTT ACCCTCAGGT ACTGGTCATT ATCGACGATC ACTTCGCCTT GCTTTCTTCG
TCGCCCTGGC AGCCGGTTAT TGCGCAGACA ACGCAACACT GGGCGGTGAT ACGCTCCGTT
TCCAAAGCCC TCGGCCCCGA TTTACGTCTT GCTATTGTCG CCAGCGACAG CACGACCTCG
GCAAAACTTC GGCTGCGGCT AAATGCCGGT AGTCAGTGGG TCAGCCATCT GTTACAGGAT
CTGGTCTACG CCTGCCTGAC CGACCCTGAG TATCAGCACA GGCTGGCGCA AACGCGGCTG
TTTTACGCCG CCCGGCAACA AAAACTGGCC TGCGCCCTAC AGCAATATGG CATCGCCATT
TCTCCCGGCG ACGGCGTGAA TGCCTGGCTC CCGCTGGACA CCCATAGCCA GGCTACCGCG
TTTACGCTGG CAAAATCCGG CTGGCTGGTA CGTGAGGGAG AAGCCTTTGG CGTAAGCGCG
CCGTCTCACG GTCTACGTAT CACGCTGTCG ACATTAAATG ACAGCGAGAT CAACACGCTG
GCGGCTGATA TCCATCAGGC GCTAAATCGC TAA
|
|---|
| Protein sequence | MIDGKTANEI FDSIRQHIIA GTLRAEDSLP PVRELANELK VNRNTVAAAY KRLITAGLAQ
SLGRNGTVIK GSPSPVALEG GDPHTPLHDL SGGNPDPQRL PDLSHYFARL NRTPHLYGDA
PVSPELHAWA ARWLRDATPV AGEIDITSGA IDAIERLLCA HLLPGDSVAV EDPCFLSSIN
MLRYAGFSAS PVSVDSEGMQ PEKLEQALNQ GARAVILTPR AHNPTGCSLS ARRAAALQNI
LARYPQVLVI IDDHFALLSS SPWQPVIAQT TQHWAVIRSV SKALGPDLRL AIVASDSTTS
AKLRLRLNAG SQWVSHLLQD LVYACLTDPE YQHRLAQTRL FYAARQQKLA CALQQYGIAI
SPGDGVNAWL PLDTHSQATA FTLAKSGWLV REGEAFGVSA PSHGLRITLS TLNDSEINTL
AADIHQALNR
|
|---|
| |