Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | EcE24377A_1618 |
Symbol | |
ID | 5588121 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Escherichia coli E24377A |
Kingdom | Bacteria |
Replicon accession | NC_009801 |
Strand | + |
Start bp | 1609977 |
End bp | 1611383 |
Gene Length | 1407 bp |
Protein Length | 468 aa |
Translation table | 11 |
GC content | 51% |
IMG OID | 640925306 |
Product | GntR family transcriptional regulator |
Protein accession | YP_001462711 |
Protein GI | 157156514 |
COG category | [E] Amino acid transport and metabolism [K] Transcription |
COG ID | [COG1167] Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain (MocR family) and their eukaryotic orthologs |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 27 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAAAAAAT ACCAGCAGCT TGCAGAACAA TTACGCGAGC AGATTGCGTC GGGTATCTGG CAACCCGGCG ATCGTTTGCC TTCGTTGCGT GACCAGGTGG CGCTTTCAGG CATGAGCTTT ATGACTGTCA GCCATGCCTA TCAGTTGCTC GAAAGTCAGG GATATATTAT CGCACGACCG CAGTCGGGTT ATTACGTTGC GCCACAGGCA ATAAAAATGC CGAAAGCGCC AGTCATTCCA GTCACTCGAG ATGAAGCAGT CGATATCAAC ACTTATATTT TTGATATGTT GCAGGCCAGT CGCGATCCGT CGGTCGTTCC GTTTGCCTCG GCCTTTCCCG ACCCGCGACT TTTCCCCCTC CAACAACTAA ACCGCTCGCT GGCGCAGGTA AGCAAAACCG CCACGGCGAT GAGCGTGATT GAAAACTTAC CGCCAGGAAA CGCAGAACTG CGTCAGGCTA TTGCTCGTCG CTATGCCTTA CAGGGCATCA CCATTTCTCC TGATGAAATT GTCATTACTG CCGGGGCGTT AGAGGCATTA AACCTCAGTT TGCAAGCGGT AACTGAACCG GGCGATTGGG TGATAGTAGA GAATCCTTGT TTCTATGGCG CGTTGCAGGC GCTGGAACGG CTACGGCTGA AAGCGTTATC GGTGGCGACG GATGTTAAAG AAGGGATCGA TCTTCAGGCG TTGGAACTGG CGTTGCAGGA GTATCCGGTG AAAGCGTGCT GGCTGATGAC TAATAGCCAG AATCCACTCG GATTTACCTT AACGCCGCAA AAAAAAGCAC AACTGGTGGC GTTACTCAAT CAGTACAACG TAACGCTGAT TGAAGATGAC GTTTACAGCG AACTTTATTT TGGACGGGAA AAACCGCTGC CTGCGAAAGC GTGGGATCGC CACGATGGCG TTTTGCATTG CTCTTCGTTT TCGAAATGTC TGGTGCCTGG TTTTCGTATT GGTTGGGTCG CCGCCGGAAA ACATGCACGT AAAATTCAAC GCTTGCAGTT GATGAGTACG CTTTCCACCA GCTCACCGAT GCAGCTTGCG CTGGTGGATT ACCTTTCCAC GCGCCGATAC GACGCCCATC TTCGTCGCCT GCGTCGCCAG CTTGCGGAAC GTAAACAACG TGCCTGGCAG GCACTGCTGC GTTATCTGCC TGCGGAAGTT AAAATTCATC ATAGTGACAG CGGTTATTTT CTCTGGCTGG AGCTCCCCGA GCCGTTAGAT GCCGGCGAAT TAAGCCTGGC GGCACTGACG CATCATATCA GTATTGCGCC GGGTAAAATG TTTTCTACCG GTGAAAACTG GTCACGTTTT TTTCGTTTTA ATACCGCGTG GCAGTGGGGA GAACGTGAAG AACAGGCGGT AAAACAATTA GGCAAACTTA TTCAAGAACG GCTGTAA
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Protein sequence | MKKYQQLAEQ LREQIASGIW QPGDRLPSLR DQVALSGMSF MTVSHAYQLL ESQGYIIARP QSGYYVAPQA IKMPKAPVIP VTRDEAVDIN TYIFDMLQAS RDPSVVPFAS AFPDPRLFPL QQLNRSLAQV SKTATAMSVI ENLPPGNAEL RQAIARRYAL QGITISPDEI VITAGALEAL NLSLQAVTEP GDWVIVENPC FYGALQALER LRLKALSVAT DVKEGIDLQA LELALQEYPV KACWLMTNSQ NPLGFTLTPQ KKAQLVALLN QYNVTLIEDD VYSELYFGRE KPLPAKAWDR HDGVLHCSSF SKCLVPGFRI GWVAAGKHAR KIQRLQLMST LSTSSPMQLA LVDYLSTRRY DAHLRRLRRQ LAERKQRAWQ ALLRYLPAEV KIHHSDSGYF LWLELPEPLD AGELSLAALT HHISIAPGKM FSTGENWSRF FRFNTAWQWG EREEQAVKQL GKLIQERL
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