| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bphyt_4517 |
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| Symbol | |
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| ID | 6279848 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia phytofirmans PsJN |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010676 |
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| Strand | - |
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| Start bp | 585250 |
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| End bp | 586665 |
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| Gene Length | 1416 bp |
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| Protein Length | 471 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 642615607 |
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| Product | transcriptional regulator, GntR family with aminotransferase domain |
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| Protein accession | YP_001888260 |
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| Protein GI | 187919229 |
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| COG category | [E] Amino acid transport and metabolism
[K] Transcription |
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| COG ID | [COG1167] Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain (MocR family) and their eukaryotic orthologs |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 29 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 50 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAACGCT TCGAAATGCT GGCCAACACC ATGGCCGATG AAATTCGCTC GGGCAGCCGG
CCAGTCGGCT CGCGTATGCC GTCGCTGCGG CATCTCACCA CACAGCACGG CGTGAGCCAG
TCCACCGTGT TTCGTGCCTA TTATCTGCTC GAAGAGTGGG GCTTGATTCG AGCACGCGAA
CGCTCGGGCT ACTACGTCGC GCCGGGCGCC GCGCTCGAAC ACAAACCGGC GCCCCAACCG
CCAGCCGCTC TGGAATCCGC CAAGGTCGAG ATCAGCGATC TCGTTTTCTC GGTGCTCGAA
GCCGCGAAGC ATCCCAATGT GGTGCCGTTC GGTTCGGCCT TTCCGTCTCC GCAACTTTTT
CCCCTCCAGC GTCTGGCCAG GTCGCTCGGG CATTCGAGCC GTTTGATCAG TCCGTGGAGC
ACCGTCGTCG ATCTTCCGCC GGGCAATGAG CCGTTGCGCC GCCAGATATC GTTGCGTTAC
ATGGGGATGG GCATTGCCCA GCCGATGGAG CAGCTTGTCG TCACCAACGG CGCGCTGGAA
GCATTGAACC TGTGTTTGAT GGCCGTCACG CGCCCGGGCG ACGTGGTCGC GATCGAGTCG
CCCGGATTCT ATGCGGCCCT GCAGGCCATC GAGCGCCTCG ATCTGCGGGC GGTCGAGATT
CCAGTCGATC CTGTGTCGGG CATCGATTTG CAAGCGCTCT CGGATGCCCT CGACAAGCAT
CCTATCCGCG CATGCTGGTT CATGACCAAC TATCAGAATC CGACCGGCGC GGCGATGTCG
CAGGAGAAGA AGAAAGCGCT GGTCGAACTT CTCGCCGAAC GTGACGTGCC GCTTATCGAG
GATGACGTGT ACGGCGAACT GCATCACGCG GCGACCTACC CGCTGCCCGC CATCGCCTTC
GACACGAAAG GGCTCGTGAT GCACTGCAGT TCATTTTCGA AGACGCTCGC TCCGGGATAC
CGCATTGGAT GGGTCGCGGC GGGACGCTTC GCCGAGAAGG TGCAGCGCCT GAAGCTGATG
ACCACGTTGT CGGCCAGCAT TCCCGCGCAG GCAGCGATAG CGGACTATCT TCAGCACGGC
GGGTACGACA AGCATCTGCG GAAACTGCGC GGCGCGTTCC GCAATCAACT CGCCTCGATG
GACACCGCGC TGCGCCGCTA CATGCCGGAG GATTCGCATT GGACGCTGCC GTCCGGAGGC
TATTTTCTGT GGCTGCGGCT GCCGTCGCAT GTCGACGCGA TGCAATTGCA CCGCCTTGCG
CTAGAGAACG GCATCAGCAT CGCGCCGGGT CCGATCTTCT CCGCGCGGCA CGAATTCCGG
AATCATATCC GCTTGAACTT CGGTCATCCG TGGAGCGACA ACACGGAGAG CGCTGTCCAA
ACACTGGCCT CGCTGCTCGA GCAGGCGAGC CGATAA
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| Protein sequence | MKRFEMLANT MADEIRSGSR PVGSRMPSLR HLTTQHGVSQ STVFRAYYLL EEWGLIRARE
RSGYYVAPGA ALEHKPAPQP PAALESAKVE ISDLVFSVLE AAKHPNVVPF GSAFPSPQLF
PLQRLARSLG HSSRLISPWS TVVDLPPGNE PLRRQISLRY MGMGIAQPME QLVVTNGALE
ALNLCLMAVT RPGDVVAIES PGFYAALQAI ERLDLRAVEI PVDPVSGIDL QALSDALDKH
PIRACWFMTN YQNPTGAAMS QEKKKALVEL LAERDVPLIE DDVYGELHHA ATYPLPAIAF
DTKGLVMHCS SFSKTLAPGY RIGWVAAGRF AEKVQRLKLM TTLSASIPAQ AAIADYLQHG
GYDKHLRKLR GAFRNQLASM DTALRRYMPE DSHWTLPSGG YFLWLRLPSH VDAMQLHRLA
LENGISIAPG PIFSARHEFR NHIRLNFGHP WSDNTESAVQ TLASLLEQAS R
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