More than 300 homologs were found in PanDaTox collection
for query gene Dtpsy_0018 on replicon NC_011992
Organism: Acidovorax ebreus TPSY



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_011992  Dtpsy_0018  transcriptional regulator, GntR family with aminotransferase domain  100 
 
 
442 aa  834    Acidovorax ebreus TPSY  Bacteria  normal  0.316764  n/a   
 
 
-
 
NC_008782  Ajs_4162  GntR family transcriptional regulator  97.96 
 
 
442 aa  737    Acidovorax sp. JS42  Bacteria  normal  normal 
 
 
-
 
NC_008752  Aave_0017  GntR family transcriptional regulator  59.4 
 
 
442 aa  385  1e-106  Acidovorax citrulli AAC00-1  Bacteria  normal  normal 
 
 
-
 
NC_009832  Spro_2563  transcriptional regulator  46.8 
 
 
434 aa  301  2e-80  Serratia proteamaculans 568  Bacteria  normal  normal 
 
 
-
 
NC_013947  Snas_4186  transcriptional regulator, GntR family with aminotransferase domain-containing protein  43.05 
 
 
436 aa  238  1e-61  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  0.710263  normal  0.0862967 
 
 
-
 
NC_009425  Ent638_4213  GntR family transcriptional regulator  34.73 
 
 
432 aa  230  3e-59  Enterobacter sp. 638  Bacteria  normal  0.0990086  normal 
 
 
-
 
NC_011071  Smal_2382  transcriptional regulator, GntR family with aminotransferase domain  41.19 
 
 
428 aa  228  1e-58  Stenotrophomonas maltophilia R551-3  Bacteria  normal  0.268016  normal 
 
 
-
 
NC_013131  Caci_1566  transcriptional regulator, GntR family with aminotransferase domain  42.66 
 
 
444 aa  228  2e-58  Catenulispora acidiphila DSM 44928  Bacteria  normal  normal  0.487946 
 
 
-
 
NC_011094  SeSA_A2672  GntR-family transcriptional regulator  37.1 
 
 
430 aa  205  1e-51  Salmonella enterica subsp. enterica serovar Schwarzengrund str. CVM19633  Bacteria  normal  0.562569  normal 
 
 
-
 
NC_011083  SeHA_C2696  GntR family transcriptional regulator  36.51 
 
 
430 aa  204  2e-51  Salmonella enterica subsp. enterica serovar Heidelberg str. SL476  Bacteria  normal  normal 
 
 
-
 
NC_011205  SeD_A2802  GntR family transcriptional regulator  36.36 
 
 
430 aa  204  2e-51  Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853  Bacteria  normal  normal 
 
 
-
 
NC_011149  SeAg_B2581  GntR-family transcriptional regulator  36.51 
 
 
430 aa  204  3e-51  Salmonella enterica subsp. enterica serovar Agona str. SL483  Bacteria  normal  n/a   
 
 
-
 
NC_011080  SNSL254_A2630  GntR family transcriptional regulator  36.51 
 
 
430 aa  202  9.999999999999999e-51  Salmonella enterica subsp. enterica serovar Newport str. SL254  Bacteria  normal  0.0520726  normal 
 
 
-
 
NC_007974  Rmet_4117  transcriptional regulator with aminotransferase and DNA binding domains (possibly involved in vitB6 biosynthesis)  37.08 
 
 
431 aa  198  2.0000000000000003e-49  Cupriavidus metallidurans CH34  Bacteria  normal  normal 
 
 
-
 
NC_013172  Bfae_00360  transcriptional regulator with HTH domain and aminotransferase domain  40.38 
 
 
455 aa  196  5.000000000000001e-49  Brachybacterium faecium DSM 4810  Bacteria  normal  n/a   
 
 
-
 
NC_014151  Cfla_1430  transcriptional regulator, GntR family with aminotransferase domain  37.9 
 
 
446 aa  182  1e-44  Cellulomonas flavigena DSM 20109  Bacteria  normal  0.0746057  normal 
 
 
-
 
NC_013521  Sked_24220  transcriptional regulator with HTH domain and aminotransferase domain  36.2 
 
 
448 aa  176  5e-43  Sanguibacter keddieii DSM 10542  Bacteria  normal  normal 
 
 
-
 
NC_014158  Tpau_0837  transcriptional regulator, GntR family with aminotransferase domain  35.89 
 
 
462 aa  174  1.9999999999999998e-42  Tsukamurella paurometabola DSM 20162  Bacteria  normal  0.439147  n/a   
 
 
-
 
NC_013124  Afer_0940  transcriptional regulator, GntR family with aminotransferase domain  37.44 
 
 
462 aa  163  7e-39  Acidimicrobium ferrooxidans DSM 10331  Bacteria  normal  0.0465159  n/a   
 
 
-
 
NC_008254  Meso_0044  GntR family transcriptional regulator  32.22 
 
 
445 aa  153  5.9999999999999996e-36  Chelativorans sp. BNC1  Bacteria  normal  n/a   
 
 
-
 
NC_007951  Bxe_A1472  GntR family transcriptional regulator  30.88 
 
 
449 aa  152  8e-36  Burkholderia xenovorans LB400  Bacteria  normal  normal  0.240551 
 
 
-
 
NC_012880  Dd703_0385  transcriptional regulator, GntR family with aminotransferase domain  30.61 
 
 
452 aa  148  2.0000000000000003e-34  Dickeya dadantii Ech703  Bacteria  normal  0.577938  n/a   
 
 
-
 
NC_012848  Rleg_5410  transcriptional regulator, GntR family with aminotransferase domain  31 
 
 
441 aa  147  4.0000000000000006e-34  Rhizobium leguminosarum bv. trifolii WSM1325  Bacteria  normal  normal 
 
 
-
 
NC_011368  Rleg2_5225  transcriptional regulator, GntR family with aminotransferase domain  32.37 
 
 
441 aa  146  8.000000000000001e-34  Rhizobium leguminosarum bv. trifolii WSM2304  Bacteria  normal  normal  0.260155 
 
 
-
 
NC_010816  BLD_1418  putative transcriptional regulator  30.32 
 
 
532 aa  139  1e-31  Bifidobacterium longum DJO10A  Bacteria  normal  n/a   
 
 
-
 
NC_007952  Bxe_B2819  GntR family transcriptional regulator  34.62 
 
 
467 aa  136  6.0000000000000005e-31  Burkholderia xenovorans LB400  Bacteria  normal  normal 
 
 
-
 
NC_007952  Bxe_B0246  GntR family transcriptional regulator  32.81 
 
 
507 aa  102  1e-20  Burkholderia xenovorans LB400  Bacteria  normal  normal 
 
 
-
 
NC_013946  Mrub_0775  GntR family transcriptional regulator with aminotransferase domain  27.74 
 
 
484 aa  101  2e-20  Meiothermus ruber DSM 1279  Bacteria  normal  0.835406  normal  0.904358 
 
 
-
 
NC_010676  Bphyt_7128  transcriptional regulator, GntR family with aminotransferase domain  31.9 
 
 
507 aa  99.4  1e-19  Burkholderia phytofirmans PsJN  Bacteria  normal  normal 
 
 
-
 
NC_011080  SNSL254_A3002  GntR family transcriptional regulator  30.84 
 
 
444 aa  97.4  5e-19  Salmonella enterica subsp. enterica serovar Newport str. SL254  Bacteria  normal  hitchhiker  0.00227723 
 
 
-
 
NC_011083  SeHA_C2985  GntR family transcriptional regulator  29.98 
 
 
444 aa  96.7  8e-19  Salmonella enterica subsp. enterica serovar Heidelberg str. SL476  Bacteria  normal  normal  0.12333 
 
 
-
 
NC_011149  SeAg_B2919  transcriptional regulator, GntR family with aminotransferase domain  29.98 
 
 
444 aa  96.3  9e-19  Salmonella enterica subsp. enterica serovar Agona str. SL483  Bacteria  normal  n/a   
 
 
-
 
NC_011094  SeSA_A2950  transcriptional regulator, GntR family with aminotransferase domain  29.98 
 
 
444 aa  96.3  9e-19  Salmonella enterica subsp. enterica serovar Schwarzengrund str. CVM19633  Bacteria  normal  0.130328  normal  0.0175968 
 
 
-
 
NC_011205  SeD_A3108  GntR family transcriptional regulator  29.76 
 
 
444 aa  95.5  1e-18  Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853  Bacteria  normal  0.552212  normal  0.675979 
 
 
-
 
NC_008060  Bcen_1433  GntR family transcriptional regulator  28.39 
 
 
470 aa  95.5  1e-18  Burkholderia cenocepacia AU 1054  Bacteria  normal  0.139667  n/a   
 
 
-
 
NC_008544  Bcen2424_6395  GntR family transcriptional regulator  28.39 
 
 
470 aa  95.5  1e-18  Burkholderia cenocepacia HI2424  Bacteria  normal  normal 
 
 
-
 
NC_010002  Daci_2022  transcriptional regulator  29.09 
 
 
509 aa  95.1  2e-18  Delftia acidovorans SPH-1  Bacteria  normal  0.190123  normal 
 
 
-
 
NC_014213  Mesil_3297  hypothetical protein  28.99 
 
 
493 aa  95.5  2e-18  Meiothermus silvanus DSM 9946  Bacteria  normal  normal  0.0920316 
 
 
-
 
NC_013441  Gbro_1658  regulatory protein GntR HTH  32.31 
 
 
498 aa  95.1  2e-18  Gordonia bronchialis DSM 43247  Bacteria  normal  n/a   
 
 
-
 
NC_008576  Mmc1_0766  GntR family transcriptional regulator  30.91 
 
 
473 aa  94.7  3e-18  Magnetococcus sp. MC-1  Bacteria  normal  0.124102  normal 
 
 
-
 
NC_010557  BamMC406_6454  transcriptional regulator  28.17 
 
 
470 aa  92.4  1e-17  Burkholderia ambifaria MC40-6  Bacteria  normal  normal  0.645482 
 
 
-
 
NC_007760  Adeh_0043  GntR family transcriptional regulator  32.74 
 
 
492 aa  92.8  1e-17  Anaeromyxobacter dehalogenans 2CP-C  Bacteria  normal  n/a   
 
 
-
 
NC_011312  VSAL_I1306  putative HTH-type trancriptional regulator, GntR family  25.13 
 
 
446 aa  91.7  3e-17  Aliivibrio salmonicida LFI1238  Bacteria  normal  0.734577  n/a   
 
 
-
 
NC_003909  BCE_3789  GntR family transcriptional regulator  25.38 
 
 
477 aa  89.7  1e-16  Bacillus cereus ATCC 10987  Bacteria  normal  0.0162684  n/a   
 
 
-
 
NC_006274  BCZK3511  GntR family transcriptional regulator  25.84 
 
 
477 aa  89  1e-16  Bacillus cereus E33L  Bacteria  normal  n/a   
 
 
-
 
NC_007643  Rru_A1925  GntR family transcriptional regulator  30.79 
 
 
488 aa  88.2  3e-16  Rhodospirillum rubrum ATCC 11170  Bacteria  normal  n/a   
 
 
-
 
NC_011658  BCAH187_A3799  transcriptional regulator, GntR family/aminotransferase, class I protein  25.42 
 
 
477 aa  87.8  4e-16  Bacillus cereus AH187  Bacteria  hitchhiker  0.00124231  n/a   
 
 
-
 
NC_007951  Bxe_A1487  GntR family transcriptional regulator  28.04 
 
 
477 aa  87  5e-16  Burkholderia xenovorans LB400  Bacteria  normal  0.539495  normal  0.767107 
 
 
-
 
NC_011773  BCAH820_3767  transcriptional regulator, GntR family/aminotransferase, class I protein  25.63 
 
 
477 aa  86.3  9e-16  Bacillus cereus AH820  Bacteria  n/a    hitchhiker  0.00000000429089 
 
 
-
 
NC_005945  BAS3600  GntR family transcriptional regulator  25.63 
 
 
477 aa  86.3  0.000000000000001  Bacillus anthracis str. Sterne  Bacteria  normal  n/a   
 
 
-
 
NC_009620  Smed_3701  GntR family transcriptional regulator  29 
 
 
478 aa  85.9  0.000000000000001  Sinorhizobium medicae WSM419  Bacteria  normal  normal 
 
 
-
 
NC_007530  GBAA_3886  GntR family transcriptional regulator  25.63 
 
 
477 aa  86.3  0.000000000000001  Bacillus anthracis str. 'Ames Ancestor'  Bacteria  normal  n/a   
 
 
-
 
NC_012856  Rpic12D_3289  transcriptional regulator, GntR family with aminotransferase domain protein  28.51 
 
 
485 aa  86.3  0.000000000000001  Ralstonia pickettii 12D  Bacteria  normal  normal 
 
 
-
 
NC_005957  BT9727_3499  transcriptional regulator  25.63 
 
 
477 aa  85.5  0.000000000000002  Bacillus thuringiensis serovar konkukian str. 97-27  Bacteria  hitchhiker  0.0033434  n/a   
 
 
-
 
NC_011891  A2cp1_1714  transcriptional regulator, GntR family with aminotransferase domain  31.83 
 
 
488 aa  85.5  0.000000000000002  Anaeromyxobacter dehalogenans 2CP-1  Bacteria  normal  0.0550689  n/a   
 
 
-
 
NC_007974  Rmet_4318  GntR family transcriptional regulator  25.67 
 
 
504 aa  85.1  0.000000000000002  Cupriavidus metallidurans CH34  Bacteria  normal  0.632192  normal 
 
 
-
 
NC_007406  Nwi_0881  GntR family transcriptional regulator  29.06 
 
 
478 aa  85.1  0.000000000000003  Nitrobacter winogradskyi Nb-255  Bacteria  normal  0.426216  normal 
 
 
-
 
NC_011891  A2cp1_0059  transcriptional regulator, GntR family with aminotransferase domain  33.07 
 
 
487 aa  84  0.000000000000004  Anaeromyxobacter dehalogenans 2CP-1  Bacteria  normal  0.869186  n/a   
 
 
-
 
NC_013947  Snas_1082  transcriptional regulator, GntR family with aminotransferase domain-containing protein  31.34 
 
 
457 aa  83.6  0.000000000000006  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  0.029023  normal 
 
 
-
 
NC_010682  Rpic_3611  transcriptional regulator, GntR family with aminotransferase domain  28.46 
 
 
485 aa  83.6  0.000000000000006  Ralstonia pickettii 12J  Bacteria  normal  0.444902  normal 
 
 
-
 
NC_009719  Plav_2133  GntR family transcriptional regulator  26.46 
 
 
476 aa  83.2  0.000000000000009  Parvibaculum lavamentivorans DS-1  Bacteria  normal  normal 
 
 
-
 
NC_014210  Ndas_2010  transcriptional regulator, GntR family with aminotransferase domain  32.35 
 
 
483 aa  83.2  0.000000000000009  Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111  Bacteria  normal  0.348528  normal 
 
 
-
 
NC_011145  AnaeK_1641  transcriptional regulator, GntR family with aminotransferase domain  32.18 
 
 
488 aa  82.8  0.00000000000001  Anaeromyxobacter sp. K  Bacteria  normal  0.119637  n/a   
 
 
-
 
NC_007760  Adeh_2233  GntR family transcriptional regulator  32.29 
 
 
488 aa  83.2  0.00000000000001  Anaeromyxobacter dehalogenans 2CP-C  Bacteria  normal  0.420665  n/a   
 
 
-
 
NC_008391  Bamb_3667  GntR family transcriptional regulator  27.16 
 
 
494 aa  82.4  0.00000000000001  Burkholderia ambifaria AMMD  Bacteria  normal  normal  0.890756 
 
 
-
 
NC_011725  BCB4264_A3856  transcriptional regulator, GntR family/aminotransferase, class I protein  25.15 
 
 
477 aa  82  0.00000000000002  Bacillus cereus B4264  Bacteria  normal  n/a   
 
 
-
 
NC_007493  RSP_1922  GntR family transcriptional regulator  32.28 
 
 
470 aa  81.6  0.00000000000003  Rhodobacter sphaeroides 2.4.1  Bacteria  normal  0.664628  n/a   
 
 
-
 
NC_010498  EcSMS35_2793  GntR family transcriptional regulator  28.05 
 
 
444 aa  81.3  0.00000000000003  Escherichia coli SMS-3-5  Bacteria  normal  normal  0.102841 
 
 
-
 
NC_009636  Smed_1974  GntR family transcriptional regulator  28.93 
 
 
514 aa  80.9  0.00000000000004  Sinorhizobium medicae WSM419  Bacteria  normal  normal 
 
 
-
 
NC_011369  Rleg2_0907  transcriptional regulator, GntR family with aminotransferase domain  26.97 
 
 
467 aa  80.9  0.00000000000004  Rhizobium leguminosarum bv. trifolii WSM2304  Bacteria  normal  0.358943  normal 
 
 
-
 
NC_011145  AnaeK_0047  transcriptional regulator, GntR family with aminotransferase domain  32.52 
 
 
482 aa  80.9  0.00000000000005  Anaeromyxobacter sp. K  Bacteria  normal  0.493151  n/a   
 
 
-
 
NC_007963  Csal_1101  GntR family transcriptional regulator  27.84 
 
 
464 aa  80.9  0.00000000000005  Chromohalobacter salexigens DSM 3043  Bacteria  normal  n/a   
 
 
-
 
NC_011353  ECH74115_3915  transcriptional regulator, GntR family  28.63 
 
 
444 aa  80.9  0.00000000000005  Escherichia coli O157:H7 str. EC4115  Bacteria  normal  normal  0.0753496 
 
 
-
 
NC_010515  Bcenmc03_3251  transcriptional regulator  28 
 
 
494 aa  80.5  0.00000000000006  Burkholderia cenocepacia MC0-3  Bacteria  normal  normal 
 
 
-
 
NC_010681  Bphyt_2639  transcriptional regulator, GntR family with aminotransferase domain  27.1 
 
 
477 aa  80.1  0.00000000000007  Burkholderia phytofirmans PsJN  Bacteria  normal  0.147714  normal 
 
 
-
 
NC_009049  Rsph17029_0573  GntR family transcriptional regulator  32.28 
 
 
470 aa  80.1  0.00000000000008  Rhodobacter sphaeroides ATCC 17029  Bacteria  normal  normal 
 
 
-
 
NC_008044  TM1040_2167  GntR family transcriptional regulator  30.72 
 
 
465 aa  80.1  0.00000000000008  Ruegeria sp. TM1040  Bacteria  normal  normal  0.786725 
 
 
-
 
NC_009972  Haur_3364  transcriptional regulator  30.63 
 
 
498 aa  79.7  0.00000000000009  Herpetosiphon aurantiacus ATCC 23779  Bacteria  normal  n/a   
 
 
-
 
NC_011772  BCG9842_B1442  transcriptional regulator, GntR family/aminotransferase, class I protein  25.98 
 
 
477 aa  79.3  0.0000000000001  Bacillus cereus G9842  Bacteria  normal  0.057405  hitchhiker  0.00000201635 
 
 
-
 
NC_013457  VEA_000881  transcriptional regulator  30.12 
 
 
478 aa  79.3  0.0000000000001  Vibrio sp. Ex25  Bacteria  normal  0.458944  n/a   
 
 
-
 
NC_007650  BTH_II2118  GntR family transcriptional regulator  27.63 
 
 
562 aa  79.3  0.0000000000001  Burkholderia thailandensis E264  Bacteria  normal  0.0506592  n/a   
 
 
-
 
NC_011981  Avi_7573  transcriptional regulator GntR family  28.03 
 
 
467 aa  79.7  0.0000000000001  Agrobacterium vitis S4  Bacteria  normal  0.688585  n/a   
 
 
-
 
NC_008686  Pden_1434  GntR family transcriptional regulator  32.02 
 
 
480 aa  79.3  0.0000000000001  Paracoccus denitrificans PD1222  Bacteria  normal  normal  0.515471 
 
 
-
 
NC_009674  Bcer98_2044  GntR family transcriptional regulator  24.59 
 
 
480 aa  78.6  0.0000000000002  Bacillus cytotoxicus NVH 391-98  Bacteria  normal  0.439116  n/a   
 
 
-
 
NC_010338  Caul_2483  transcriptional regulator  31.91 
 
 
470 aa  78.6  0.0000000000002  Caulobacter sp. K31  Bacteria  normal  0.0358309  normal 
 
 
-
 
NC_012850  Rleg_1054  transcriptional regulator, GntR family with aminotransferase domain  26.69 
 
 
467 aa  79  0.0000000000002  Rhizobium leguminosarum bv. trifolii WSM1325  Bacteria  normal  0.180567  normal 
 
 
-
 
NC_008061  Bcen_4100  GntR family transcriptional regulator  28.43 
 
 
494 aa  78.6  0.0000000000002  Burkholderia cenocepacia AU 1054  Bacteria  normal  0.959861  n/a   
 
 
-
 
NC_008543  Bcen2424_4266  GntR family transcriptional regulator  28.43 
 
 
494 aa  78.6  0.0000000000002  Burkholderia cenocepacia HI2424  Bacteria  normal  0.501313  normal  0.325137 
 
 
-
 
NC_011071  Smal_3799  transcriptional regulator, GntR family with aminotransferase domain  28.82 
 
 
504 aa  79  0.0000000000002  Stenotrophomonas maltophilia R551-3  Bacteria  normal  normal 
 
 
-
 
NC_011365  Gdia_0682  transcriptional regulator, GntR family with aminotransferase domain  30.56 
 
 
474 aa  77.8  0.0000000000003  Gluconacetobacter diazotrophicus PAl 5  Bacteria  normal  hitchhiker  0.000368055 
 
 
-
 
NC_009511  Swit_2764  GntR family transcriptional regulator  31.92 
 
 
453 aa  78.2  0.0000000000003  Sphingomonas wittichii RW1  Bacteria  normal  normal 
 
 
-
 
NC_007347  Reut_A1805  GntR family transcriptional regulator  27.29 
 
 
504 aa  78.2  0.0000000000003  Ralstonia eutropha JMP134  Bacteria  normal  n/a   
 
 
-
 
NC_010676  Bphyt_5339  transcriptional regulator, GntR family with aminotransferase domain  25.32 
 
 
469 aa  77.8  0.0000000000003  Burkholderia phytofirmans PsJN  Bacteria  normal  0.485061  normal 
 
 
-
 
NC_008686  Pden_0279  GntR family transcriptional regulator  28.7 
 
 
461 aa  78.2  0.0000000000003  Paracoccus denitrificans PD1222  Bacteria  normal  normal 
 
 
-
 
NC_013037  Dfer_2235  transcriptional regulator, GntR family with aminotransferase domain  25.12 
 
 
473 aa  77.8  0.0000000000004  Dyadobacter fermentans DSM 18053  Bacteria  normal  normal  0.71743 
 
 
-
 
NC_007951  Bxe_A4302  GntR family transcriptional regulator  28.14 
 
 
521 aa  77.4  0.0000000000004  Burkholderia xenovorans LB400  Bacteria  normal  normal 
 
 
-
 
NC_007511  Bcep18194_B3074  GntR family transcriptional regulator  30.47 
 
 
470 aa  77.4  0.0000000000005  Burkholderia sp. 383  Bacteria  normal  normal 
 
 
-
 
NC_007952  Bxe_B0835  GntR family transcriptional regulator  26.82 
 
 
501 aa  77.4  0.0000000000005  Burkholderia xenovorans LB400  Bacteria  normal  normal  0.255171 
 
 
-
 
NC_010676  Bphyt_4520  transcriptional regulator, GntR family with aminotransferase domain  26.81 
 
 
501 aa  76.6  0.0000000000007  Burkholderia phytofirmans PsJN  Bacteria  normal  normal 
 
 
-
 
NC_010002  Daci_5878  transcriptional regulator  30.39 
 
 
455 aa  76.6  0.0000000000008  Delftia acidovorans SPH-1  Bacteria  normal  normal  0.243171 
 
 
-
 
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