| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | VSAL_I1306 |
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| Symbol | |
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| ID | 6986985 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Aliivibrio salmonicida LFI1238 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011312 |
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| Strand | + |
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| Start bp | 1417791 |
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| End bp | 1419131 |
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| Gene Length | 1341 bp |
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| Protein Length | 446 aa |
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| Translation table | 11 |
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| GC content | 36% |
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| IMG OID | 643379669 |
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| Product | putative HTH-type trancriptional regulator, GntR family |
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| Protein accession | YP_002262768 |
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| Protein GI | 209694840 |
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| COG category | [E] Amino acid transport and metabolism
[K] Transcription |
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| COG ID | [COG1167] Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain (MocR family) and their eukaryotic orthologs |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 0.734577 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAGTGAAA ATAAATTTAA GCAAATAGCG GAGACTATTG AGTCACGAAT TATTGACGGT
ATATATCCCC CAAACTTTAA ACTGCCTCCT CATAGAGAGC TAGCTAATGA GTTATCGACA
ACACCTGCTA CTATCGCGAA AGCTTATAAA TTGCTTGCTG ATAAAAAGAG AGTTGAACCA
TTTGTAGGCA GAGGAACCTT TGTATGTGGT GAGTCACGTT TAGATCAAGT GATTCAATCT
TCTGAAGACA ACGGAGACTA TAATTTTTCA ATATTACAAC CTTGCTTGAG CCATAATGTT
CAACCGTTAA AAGAAGCATT AGAGAAAGCA GCTAGTCAAT TAACCTCAGA TCTCATTGGA
TATACGGAGC ACTCAGGGCA TGAAACTCAC CGTTTAGCAG GTGTGAATTG GGCGAAAGAA
TATGGTTTAG TTGGTGGTAA TGCCAATAAC ACTTTACTGA CAAATGGCGC ACAACATGCT
CTTTCTTTAT TGATTGAGGT ATTGACTAAG CCCGGTGATA CCATTGCTAT TGAAGCGTTG
GTTTATCCCG GAATTATTGC TATTGCGAGT TTGCTTGGTA GGCAAATCGT GGGTGTAGCG
CTTGATGACA AAGGGATGTC CCCAACAGAT TTAACTAGAG TTATTAAACA GCATAAACCT
AAATTAGTCA TCGTTATTCC TAGCTTTCAA AATCCAACTG GTATAACGAT GCCCACAGCT
CGTCGTAAAG AAATTGCAGA CGTCATTATT AAGAATAATA TTTATCTAAT TGAAGATGAT
ATTTATGGTT TTTTGAATGA AAAAGTTATT CCTGCTATTT GTAATTGGTT ACCGGAACAA
GGCTTTCATA TTACAAGTTT ATCTAAAGCA ATAAGCCCTG CAATTCGATG TGGTTTTGTT
AAGGTTCCTG ATATACATAT TTCAAATGTT GGTGCTCAAA TTCGAGCCAG TATTTGGCTA
TCTTCTCCAA TTAATTACAT TGCTGCGAGT GATATGATTG AAACAGGAGT CGCTTATCAA
CTAGCAAACT ATCAACGTGA GATAGCTTTA CGCCGACAAG AGATGGTATA TGAGGTTTTT
GGCAATAGTT ATTTAAAAAC AGATGGTTAT CATGTTTGGT TGCCGCTTAT GGCGCATTGG
CAACAAGATC AATTTGTTTT AGAGGCAAAA AATCGAGGAT TAATTGTAAG TAGTGGTGGC
TATTTTAATG CTACAGATAC GCACTTGAAC CATGTTCGTT TATCTTTAAT GTCAATTAAT
TCAGATGAGA AATTTAAAAA GGGTTTAAAA GCATTATTTG AACTTCTAAA TTCAAACAAT
AAAACCATGT TTCCATTTTA A
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| Protein sequence | MSENKFKQIA ETIESRIIDG IYPPNFKLPP HRELANELST TPATIAKAYK LLADKKRVEP
FVGRGTFVCG ESRLDQVIQS SEDNGDYNFS ILQPCLSHNV QPLKEALEKA ASQLTSDLIG
YTEHSGHETH RLAGVNWAKE YGLVGGNANN TLLTNGAQHA LSLLIEVLTK PGDTIAIEAL
VYPGIIAIAS LLGRQIVGVA LDDKGMSPTD LTRVIKQHKP KLVIVIPSFQ NPTGITMPTA
RRKEIADVII KNNIYLIEDD IYGFLNEKVI PAICNWLPEQ GFHITSLSKA ISPAIRCGFV
KVPDIHISNV GAQIRASIWL SSPINYIAAS DMIETGVAYQ LANYQREIAL RRQEMVYEVF
GNSYLKTDGY HVWLPLMAHW QQDQFVLEAK NRGLIVSSGG YFNATDTHLN HVRLSLMSIN
SDEKFKKGLK ALFELLNSNN KTMFPF
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