| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Smed_3701 |
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| Symbol | |
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| ID | 5318310 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sinorhizobium medicae WSM419 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009620 |
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| Strand | - |
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| Start bp | 141684 |
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| End bp | 143120 |
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| Gene Length | 1437 bp |
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| Protein Length | 478 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 640775514 |
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| Product | GntR family transcriptional regulator |
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| Protein accession | YP_001312447 |
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| Protein GI | 150375851 |
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| COG category | [E] Amino acid transport and metabolism
[K] Transcription |
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| COG ID | [COG1167] Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain (MocR family) and their eukaryotic orthologs |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 30 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGCTCACTT TTGCATTGTC AATTGAGCTG ATTTTGATCA CTGTTCAAAT CATGACAAAT
TGGACGCCCG ACACGACACT TCTGCGCCGC CCTGCCTATC TTTCGCTGGC GGATCAATTC
GCCCGCGCCA TTCAGGAAGG AAGGCTCCAG AACGGTGCAA GGCTGCCGAC GCACCGCAAG
CTTGCCGACG ATCTGAAGCT CTCGGTTCAG ACGGTAAGCC GCGCCTATGA CGAGCTCATC
CGGCGCGGGC TGATCTCCGG TGAGGTCGGG CGTGGCAGTT TCGTGCAGAC GCGGCCGCGC
GAGCCGGAGC CGCCCTATCT GCCGGAGCGT CTGGGCGAAT TGATCGATCT TTCGATTCTC
AAGCCGGTCT GCGAGCAATA CCATCTGGAG AAGATGCGGC AGGGCTTTGC CTGGCTTGCC
GAAAACCTGC CTGCAAGTTC GGCGCTTTCC TTTCGTCCGA ACATGGTCTT CCCGCGGCAC
CGCAACATCG CGGCTGAATG GCTGTTACGC TGCGGCCTGG ACGTCTCTCC GCTCAACATC
AATCTGACCA ACGGTGCGAC TTCGGCCATG ACCGTGGCGC TGATGAGCGT GGCGCCGCCC
GGCTCGACCG TCGCAACCGA GGCGATCAGT CACCACACTC TGGTGCCGCT TTCGAGCTAT
CTCGGAATCC ACCTCAACGG CATCGCCATC GACCGCGACG GCATGATTCC GGATGCCCTG
GACGAGGCAT GCCGCAAGGG CGTGGTTCGC GCGGTCTTCC TGCAGCCTTC GGTGATCAAC
CCGACCGCGA CCCTGATGAG CGCGGAGCGG CGGGCGGCGC TGGCGGAGGT GGCGCGGCGG
CACGACATCG CCATCATCGA GAACGATATC CTCGGGCCCC TGGTCGAGGA GCGCTTGCCC
CCGGTCGCCG CATTGGCTCC GGAGCGTACG CTCTACGTGA CGAGCTTCAC CAAGATAACC
GTGCCCGGCC TCAGGATCGG CTACCTGGTG GCCCCCGACC GTTATGTGGC CGCGGTTGCC
AACAGGCATC TCGTTTCCAA CTGGATGGCG ACTCCGGCGA TTGCGGAGAT CGCGACGCAG
TGGGTGAGCG ACGGCACGGC GATCGAACTC GTGAACTGGC AGCGCCGCGC GCTCGCCTCG
CGCCATGTGA TCGCCAAGGA GGTGCTCGGA AGTCTTGCTC ATCACACGCA CCCGCAGAGC
CTGCATGTCT GGCTGCCGCT GCCCGAAGGT CATATGGAGG ACGCCTTCGT CTCTCAGGCA
CGCCTGCGCG GCGTGGCGAT CGCACCGGGT GCATCCTTCC GAACGGCGGA CAGCGGCTGG
CGTCCGGCCG TCAGAATATC GCTCGGCTCG ACGACCGAGC AGGAACTCAG GTCCGGGCTT
GGCATTGTCG CCTCCCTGGC GCTTGGCAAG CCGGAGGCAT TATTGCTCGT CATTTGA
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| Protein sequence | MLTFALSIEL ILITVQIMTN WTPDTTLLRR PAYLSLADQF ARAIQEGRLQ NGARLPTHRK
LADDLKLSVQ TVSRAYDELI RRGLISGEVG RGSFVQTRPR EPEPPYLPER LGELIDLSIL
KPVCEQYHLE KMRQGFAWLA ENLPASSALS FRPNMVFPRH RNIAAEWLLR CGLDVSPLNI
NLTNGATSAM TVALMSVAPP GSTVATEAIS HHTLVPLSSY LGIHLNGIAI DRDGMIPDAL
DEACRKGVVR AVFLQPSVIN PTATLMSAER RAALAEVARR HDIAIIENDI LGPLVEERLP
PVAALAPERT LYVTSFTKIT VPGLRIGYLV APDRYVAAVA NRHLVSNWMA TPAIAEIATQ
WVSDGTAIEL VNWQRRALAS RHVIAKEVLG SLAHHTHPQS LHVWLPLPEG HMEDAFVSQA
RLRGVAIAPG ASFRTADSGW RPAVRISLGS TTEQELRSGL GIVASLALGK PEALLLVI
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