| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Snas_4186 |
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| Symbol | |
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| ID | 8885387 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Stackebrandtia nassauensis DSM 44728 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013947 |
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| Strand | - |
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| Start bp | 4483477 |
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| End bp | 4484787 |
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| Gene Length | 1311 bp |
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| Protein Length | 436 aa |
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| Translation table | 11 |
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| GC content | 76% |
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| IMG OID | |
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| Product | transcriptional regulator, GntR family with aminotransferase domain-containing protein |
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| Protein accession | YP_003512929 |
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| Protein GI | 291301651 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 0.710263 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 16 |
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| Fosmid unclonability p-value | 0.0862967 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGGTAGAAC AATATCAGAT CACCGGAGCC GGTGCCGCCG AAATAGTCGC CAGCGTCGAG
ACCGGCGTGC GCACCTCCCG GCTGGCACCC GGCAGCGCGC TGCCGCCGGT GCGCGCCCTG
GCCGCCGAAC TCGGCCTGGC CACCGCCACC GTCGCCGCCG CCTACCGCAC GCTGCGGCAA
CGCGGCATCG TCGACACCGC CGGACGGCAC GGCACCCGGG TGCGGCAGCG GCCCGCGATC
GAACACCGGG GCCGCACGGC GCTGCCCGCG GGCGTGCTCG ACCTCACCAC CGGCGAACCC
GACCCGGCGC TGCTGCCCGA CCTGGCCGTG GCGCTGCGGC AGGTGCCCAC CACCCCGGCC
AGCTACCGCG ACGCCGGGGC CTCGCCGCGA CTGCTGGCCG CCGCCCGCCA ACGGCTCGCC
GCCGACGGCC TGAGCGGCAC CCCCACCGTC ACCGGTGGCG CGCTGGACGG CATCTACCGC
GCGCTGTCGG CCCACCTGCG TCCCGGCGAC CGGGTCGCGG TCGAGGACCC GTGCTGGTCC
AACGTCCGCG ATCTGCTGGC CTCGCTGGGG ATGCACGCCG TCCCGGTCGC CGTCGACGAC
GAGGGCCCCA CCCCCGAGGC TTTGGAGCAG GCACTGCGAT CGGGGGCCAG CGCCTGCGTC
CTCACCAGCC GCGCCCACAA CCCCACCGGC GCCGTCATCA CCGCCGAGCG CGCCCGGCGG
CTGCGCGCCG TCCTGGCCCG GCACCCCGGC GTGCTGGCCA TTGAGGACGA TCACTGGGCC
GAACTGTCCG ACGACCCGCT CCACCCGGTC GCCGACGCCG CCGCCCGCTG GCTGTTCCTG
CGCTCGGTGT CCAAACCGTA CGGACCCGAC CTGCGGCTGG CCATCGGCTG CGGCGACGAG
GCCACCGTCG CGCGGCTGCA CGGCCAGCTG CGGCTGAGCT CCGGCTGGGT CTCCACCGTC
CTGCAACACC TCGTGCTGGG CGTGTGGGAC GACCCGCTGA CCACCCCCGC CCTGCACCGC
GCCCGCGACA CCTACCGCGA CCGCCGCCAG GCCCTGCTCA CCGCCCTTGC CGCCCACGGC
GTCACCGCGC GCGGCCACAC CGGCCTCAAC GTGTGGATCC CGGTGCCCGA CGAGACCGCG
GCCGTCACCA CGCTGCGCGA CGCCGGTTAC GCCGTCGCCC CCGGCACCCC GTACCGCATC
GCCTCGGCGT CGGGCATCCG CGTCAGCACC AGCGACCTGC CGCTCGACCA CGTCGAACCC
CTGGCCACGG TCATCGCCGA GGCCATGCAC ACGCCCTACC CGCTCGCTTA G
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| Protein sequence | MVEQYQITGA GAAEIVASVE TGVRTSRLAP GSALPPVRAL AAELGLATAT VAAAYRTLRQ
RGIVDTAGRH GTRVRQRPAI EHRGRTALPA GVLDLTTGEP DPALLPDLAV ALRQVPTTPA
SYRDAGASPR LLAAARQRLA ADGLSGTPTV TGGALDGIYR ALSAHLRPGD RVAVEDPCWS
NVRDLLASLG MHAVPVAVDD EGPTPEALEQ ALRSGASACV LTSRAHNPTG AVITAERARR
LRAVLARHPG VLAIEDDHWA ELSDDPLHPV ADAAARWLFL RSVSKPYGPD LRLAIGCGDE
ATVARLHGQL RLSSGWVSTV LQHLVLGVWD DPLTTPALHR ARDTYRDRRQ ALLTALAAHG
VTARGHTGLN VWIPVPDETA AVTTLRDAGY AVAPGTPYRI ASASGIRVST SDLPLDHVEP
LATVIAEAMH TPYPLA
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