| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | VEA_003147 |
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| Symbol | |
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| ID | 8556880 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Vibrio sp. Ex25 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013456 |
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| Strand | + |
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| Start bp | 1719778 |
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| End bp | 1721184 |
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| Gene Length | 1407 bp |
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| Protein Length | 468 aa |
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| Translation table | 11 |
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| GC content | 44% |
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| IMG OID | 646406242 |
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| Product | GntR-family regulatory protein |
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| Protein accession | YP_003285772 |
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| Protein GI | 262393918 |
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| COG category | [E] Amino acid transport and metabolism
[K] Transcription |
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| COG ID | [COG1167] Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain (MocR family) and their eukaryotic orthologs |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 5 |
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| Plasmid unclonability p-value | 0.00323958 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAATCGAT ACCGTCAATT GGCCGAATTG TTTAAGGCAC AAATTCAGCA AGATACTTGG
AGAGCAGGGG AGAAGCTGCC TTCAATACGC GTCACCAGCC GCAATCATTC CGTAAGTGCA
GGTACGGTAT TACAAGCCTA TCAATTGCTA GAGGCGCAAG GCTGGGTGAT AGCAAAGCCT
CAATCTGGTT ACTATGTGAC TGCCGATCTT GAACGTCTCA CTAATACGAA TGGAATTAAA
AGCAACAATA CACCATGCAC CAAGTTGAAT GATGAGTTGT ATTCGTTTTT GAAGCATCAA
GCAACATCGG ATGTTGTTCA TTTAGGCTCG GCGTTTCCGG ATCCGTGTTT GTTTCCTTTA
GAGTCGCTTA ACCGTAATTT GGCCAGCTCG GGACGAAAAA TGGGGCCGGA TAAGTTGCTA
GACAACCTAC CTCCTGGTGC TGAGTCGTTA AGGCGACTCG TCGCTCAGAG GTATATTCAT
CATGGGATAT CACTAACCCA TGATGATGTG GTTATTACTT CCGGTGCGCT AGAAGCATTA
AACTTGAGTT TGCAAGCGGT CACCCGACCA GGTGATACCG TCGTTGTTGA ATCCCCAACG
TTTTATGGCG CACTTCAAGC GGTAGAACGG TTAGGTCTCA AGGCTATTGA AATCAGTGTC
GATGATGAGA GTGGGCATTC GCTTGAACAA ATCGAAGCAG CTTTTGCCAA TGAAGATGTT
CGGGCTTGTT GGTTAATGAC GAACTTTCAT AATCCAACCG GGGCTTCTTT GTCTGATGAA
CACAAACGAT ACATTGTTGA GTTAGCCAAT CGATATGATG TGTATCTCAT TGAAGACGAT
GTGTACTCTG AGCTGTATTT TTCTGACAAA AGGCCGAACT CATTAAAGAG CTTTGATGAG
CAAGAACGTG TCCTTCATTG TGGTTCTTTT TCTAAGAGTT TATGCCCTGG ATATCGCTTG
GGTTGGGTGG TGAATAAGCG TTTTAACGAG ACTATTCAAA AGCTCCAGTT AATATCGACA
TTGTCTGGGA GTGCCCCTAT TCAGCAGGGA GTTGCACACT ACTTACAAAA CGACAGTTAC
GACAACCACC TGAGAAAGCT GCGTAAGACA CTGCAACACC GTCAAGCTGA CTTCGTGGAT
TTACTCGCAA AGCACATACC TAAAGAGGTT ACCTATCAAC GTCCTGATGG TGGTTACTTT
CTTTGGCTGA AATTGCCAGA TGGAATATCA AGTAAAGCGG TATATCAAGC ACTATTGTCT
GAGCATGTTA CCGTCGCTTA TGGCAAACTC TTTTCGATAA GTGATCAATA CGAAAACTAT
TTAAGACTGA ATGCATCGCT TCCTTTAGAA ACGAGTTTAG AACGTGCTAT CAAAAGATTA
GGTGATTTGC TTCGCGAATT ACTCTGA
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| Protein sequence | MNRYRQLAEL FKAQIQQDTW RAGEKLPSIR VTSRNHSVSA GTVLQAYQLL EAQGWVIAKP
QSGYYVTADL ERLTNTNGIK SNNTPCTKLN DELYSFLKHQ ATSDVVHLGS AFPDPCLFPL
ESLNRNLASS GRKMGPDKLL DNLPPGAESL RRLVAQRYIH HGISLTHDDV VITSGALEAL
NLSLQAVTRP GDTVVVESPT FYGALQAVER LGLKAIEISV DDESGHSLEQ IEAAFANEDV
RACWLMTNFH NPTGASLSDE HKRYIVELAN RYDVYLIEDD VYSELYFSDK RPNSLKSFDE
QERVLHCGSF SKSLCPGYRL GWVVNKRFNE TIQKLQLIST LSGSAPIQQG VAHYLQNDSY
DNHLRKLRKT LQHRQADFVD LLAKHIPKEV TYQRPDGGYF LWLKLPDGIS SKAVYQALLS
EHVTVAYGKL FSISDQYENY LRLNASLPLE TSLERAIKRL GDLLRELL
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