| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pmen_3095 |
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| Symbol | |
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| ID | 5107418 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas mendocina ymp |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009439 |
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| Strand | + |
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| Start bp | 3421308 |
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| End bp | 3422783 |
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| Gene Length | 1476 bp |
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| Protein Length | 491 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 640504352 |
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| Product | GntR family transcriptional regulator |
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| Protein accession | YP_001188581 |
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| Protein GI | 146308116 |
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| COG category | [E] Amino acid transport and metabolism
[K] Transcription |
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| COG ID | [COG1167] Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain (MocR family) and their eukaryotic orthologs |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 0.259075 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 47 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCTGCCG CTCACCCCGT AAAGTGTTCG CCCGTACCCT TTGCGGCGGT GAACCAGGAC
AGGATGAAAC GCTACGAAAA ATTCGCCGAC GAGATCGCCG CGCTGATCCG TACCGGCGTG
CTCGGCCCCG GCGAGAAGGT GCCCTCGGTG CGCCACGCCA GCCGCACCTA CGGGGTCAGC
CCATCCACCG TGTTCCAGGC CTACTACCTG CTGGAAGACC GCGGCCTGAT CCAGGCGCGC
GCACGCTCGG GCTACTTCGT GCGCGAGCAC GCCAAGCGCC CGCTGCACGA GCCGGAGCTG
ACCGCCCACA CGGCACAGAC CACCGAGATC GGCGTCAGCG AGCTGGTGTT CTCCGTGCTC
GCCTCGCTCA AGGATCCGCA CACCGTACCT TTCGGCTCGG CCTTCCCCAG CCCCGACCTG
TTCCCCCTGC CGCGCCTGGC CAAGAGCATG GCGCACGCGC TGCGCATGCT CTCGCCGCAC
GAGATCATCG CCGACATGAC CGCCGGCAAC GCCGACCTGC GCCGGCAGAT CGCCCTGCGC
TACATGGTCA GCGGCGTGAT GCTGCCGATG GAAGAGCTGG TGATCAGCAA CGGCGCCATG
GAGGCGCTCA ACCTTTGCCT GCAGTGCGTG ACCCAGCCGG GCGATCTGGT GGCCATCGAG
TCGCCCACCT TCTACGCCTG CCTGCAGGTG CTGGAGCGGC TGCAGCTCAA GGCGGTGGAA
ATCCCTGTGC ACCCGCGCGA AGGCATCGAC CTGGGCGCCC TGTCGGAGAG TCTGAAGCAA
CTGCCGATCA AGGCCTGCTG GTTTATGAGC AGCCTGCAGA ACCCGCTCGG CGCGAGCATG
AGCGAGGAGA AGAAACAGGC GCTGTACGAC CTGCTGGTGG AGCATCAGGT GCCGTTGATC
GAGGATGACG TGTACGCCGA GCTGTACTTC GGCAGCCACC CGCCCAAACC GGTGAAGAGC
TTCGACCGCG AAGGGCTGGT GATGCACTGC AGCTCCTTCT CCAAGAGCCT GGCGCCGGGC
TATCGCATCG GCTGGGTGGC CGGTGGGCGC TATGCCGAGC AGATCGCCCG ACTGAAGCTG
ATGACCACCA TCTCGCCTTC GGTGCCGGCC CAGGCCGCGC TGGCCGACTA CCTGCAGCAC
GGCGGTTACG ACCGCCACCT GCGCAAGCTG CGCCATGCCC TGGAGATGCA GCAGAGCGCC
ATGCTCGCCT CGGCCGCCCG GCATTTTCCC GCCAGCACGC GGGTGACGCG GCCGGCGGGC
GGCTATTTTC TCTGGTTCGA ATTTCCCGAG CGCCTGGACT CGCTGCAATT GCTGCGCCTG
GCGCTGGCCC AGGGCATCAG CCTGGCGCCG GGGCCGATCT TCTCCGCCAG CCAGGGCTTT
CGCCATTGCG CGCGGCTGAA CTACGGCCAC CCCTGGAGCC CGCGCAGCGA ACAGGCCATG
GAAGTGCTCG GGCGCCTGGT TGCAGGGCTG TTGTAG
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| Protein sequence | MSAAHPVKCS PVPFAAVNQD RMKRYEKFAD EIAALIRTGV LGPGEKVPSV RHASRTYGVS
PSTVFQAYYL LEDRGLIQAR ARSGYFVREH AKRPLHEPEL TAHTAQTTEI GVSELVFSVL
ASLKDPHTVP FGSAFPSPDL FPLPRLAKSM AHALRMLSPH EIIADMTAGN ADLRRQIALR
YMVSGVMLPM EELVISNGAM EALNLCLQCV TQPGDLVAIE SPTFYACLQV LERLQLKAVE
IPVHPREGID LGALSESLKQ LPIKACWFMS SLQNPLGASM SEEKKQALYD LLVEHQVPLI
EDDVYAELYF GSHPPKPVKS FDREGLVMHC SSFSKSLAPG YRIGWVAGGR YAEQIARLKL
MTTISPSVPA QAALADYLQH GGYDRHLRKL RHALEMQQSA MLASAARHFP ASTRVTRPAG
GYFLWFEFPE RLDSLQLLRL ALAQGISLAP GPIFSASQGF RHCARLNYGH PWSPRSEQAM
EVLGRLVAGL L
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