| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Afer_0940 |
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| Symbol | |
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| ID | 8323004 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Acidimicrobium ferrooxidans DSM 10331 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013124 |
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| Strand | - |
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| Start bp | 957757 |
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| End bp | 959145 |
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| Gene Length | 1389 bp |
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| Protein Length | 462 aa |
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| Translation table | 11 |
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| GC content | 73% |
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| IMG OID | 644952068 |
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| Product | transcriptional regulator, GntR family with aminotransferase domain |
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| Protein accession | YP_003109552 |
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| Protein GI | 256371728 |
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| COG category | [E] Amino acid transport and metabolism
[K] Transcription |
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| COG ID | [COG1167] Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain (MocR family) and their eukaryotic orthologs |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 7 |
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| Plasmid unclonability p-value | 0.0465159 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGAGCATC TCGGGCACGA CGCAGCGGCA GACGCCCTGG TGGCAGCGCT GCGCCGTCGC
AGCGTCGGCA CGATCGGCGT GCGCACCGTT GCCTCGACGG TCGCGACCAT GATTCGCGCC
GGTGAGCTTC CCGAAGGCAC GCGCTTGCCC CCTGTTCGCC AGCTCGCCGC GGACCTTGGG
ATCTCGCCGA CGACGGTGGC GGCTGCTTGG GCACAGCTCG CCAGCTTGGG GCTCGTCGCG
GCCCAGGGCC GCCGTGGTAC CTTCGTCGCC TCACCACCGC GCCGTCGGCC TCGGCGATGG
CAGCAGACGC CGCCCCAGCC CGCACGCTAT GACCTCGGCA CCGGCGCTCC CGATCCGCGC
CTGCTCCCCG ACCCCGTGTC CTATCTCCCA CGCATCGCCC CGCTCGCTCC CGCGACGTAC
GCGGACCCAC CGGTGTTCGG ACCCCTCGTC GACGTCCTCG TCCCCTTGCT GCCACCCGCC
CTCCAGCTCC GAGCGGACAC CGGCACCACG ATCGTCGATG GCGCCCTCGA GGCGATCGAC
CGACTCCTCG GCACCGTCGC TCCCAGCGCG ACCGCCGTCG CCGTGGAGGA TCCGAGCTTT
CCCGCGCTCT TCGACCTCGT CGAGGCCCAC GGCTTGAGCG TCTGGCCCCT CCCGATCGAC
GCCGAGGGCC CCGACCCGAG CGACCTTGCG CGACTCGCCG CACGCCCCGA GCTTGGCGCG
GTGATCATCC AGCCCCGCGC GCACAACCCG ACCGGCGCGA CGGTGAGCGG CGAGCGTCGC
GATGCGCTGG CAGCAGCCCT CGCCCCACGC CCCGACGTCC TCGTGATCGA GGACGATCAC
TCCGGGCTCG TCGCCTCGAC GCTGTTGGCG AGCCTCGCAG GGCTCCATCC CGCGAGTGCG
TACGTGCTCA GCTTCTCGAA GTCCCACGGG CCCGACCTGC GCCTCGCCGC GATCATCACC
GATGCCGACC GACGCGACGC GCTCGAGCAC GCGCGCAGCC TCGGCCCGTC GTGGTCGCCG
AAACTCCTCC AGGCGCTGCT CGCCGCGATG CTCGAGGCCC CCGAGGAGAC GGAGCGCCTC
GAGCACGCCC GTGCCACCTA CGCAGCCCGA CGGGAGCGCC TCGCCGATGC GCTGGGTCGC
AACCTGACGG GAGACGGCGT CAACGCATGG CTCCCGCCCG ATCCCGAGGC GCTCATCGCC
CTCGAGCTCG CCGCCCACGG CGTGCGCACC GTGCCAGGCG CCGCCTTCAC CCTCGCCTCG
TCGTTCGCCG GCGCCGTGCG CATCACGCTG GCCGAGCCCC ACCACGACTT CGACGAGGTG
CTCGCCTACC TCGAGCGAGC GCGCCTCGAT ACCACGGCCT CACGACGCGA GCGAGCCCTC
GGGCGCTGA
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| Protein sequence | MEHLGHDAAA DALVAALRRR SVGTIGVRTV ASTVATMIRA GELPEGTRLP PVRQLAADLG
ISPTTVAAAW AQLASLGLVA AQGRRGTFVA SPPRRRPRRW QQTPPQPARY DLGTGAPDPR
LLPDPVSYLP RIAPLAPATY ADPPVFGPLV DVLVPLLPPA LQLRADTGTT IVDGALEAID
RLLGTVAPSA TAVAVEDPSF PALFDLVEAH GLSVWPLPID AEGPDPSDLA RLAARPELGA
VIIQPRAHNP TGATVSGERR DALAAALAPR PDVLVIEDDH SGLVASTLLA SLAGLHPASA
YVLSFSKSHG PDLRLAAIIT DADRRDALEH ARSLGPSWSP KLLQALLAAM LEAPEETERL
EHARATYAAR RERLADALGR NLTGDGVNAW LPPDPEALIA LELAAHGVRT VPGAAFTLAS
SFAGAVRITL AEPHHDFDEV LAYLERARLD TTASRRERAL GR
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