| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Spro_4307 |
|---|
| Symbol | |
|---|
| ID | 5604338 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Serratia proteamaculans 568 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009832 |
|---|
| Strand | + |
|---|
| Start bp | 4775913 |
|---|
| End bp | 4777379 |
|---|
| Gene Length | 1467 bp |
|---|
| Protein Length | 488 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 60% |
|---|
| IMG OID | 640939868 |
|---|
| Product | transcriptional regulator |
|---|
| Protein accession | YP_001480529 |
|---|
| Protein GI | 157372540 |
|---|
| COG category | [E] Amino acid transport and metabolism
[K] Transcription |
|---|
| COG ID | [COG1167] Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain (MocR family) and their eukaryotic orthologs |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 26 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 30 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | TTGCGCTCAC TGAGTGGTGA CCTGTTATTG CAGCGTCTCG GCGAACAGCC CGATGATAAG
CTGCATAAAC GGCTCTATAA TGCGATCCGT ACCAGCATTC TGGACGGTAG CCTGCCGCCC
TCCAGCCGCC TGCCCGCCTC ACGCGATTTA GCGCAGGAGC TTAGCCTTTC ACGTAACACG
GTTTTAACCG TTTATGAACA ATTGCTGGCA GAAGGATATG TTCTGGCACG CGCGGGAAGT
GGCACATTCG TCGCCGAAAC CGTGCCAGAT AGTTGTTTAT CCACTGCCAG CGCCCCGGCA
GGCAGTGACG GGGTGCAACG AGGTATTGAA CTGTCAGAGC GCGGCGCCGC TCTGTTGCAT
CACGCCAGCG CCAGTCCCAA ACAATGGGGC GCGTTTATCC CCGGCGTGCC CGATGTTAAT
GCCTTCCCTC ATCAGTTATT CAGCAAGATC CAGGCACGCA TTAGCCGTCG CCCAGCCCCG
CAGAAACTGA CCTACAGCAA CCAGGGCGGC AGCCCGGAAC TGCAACATGC GCTGGTGGAT
TATCTGCGCG TAGCGCGTTC GGTACGCTGT TCGCCGGAGC AGATTCTGAT TACCGAGGGC
ATCCATCAGG CGATAGATCT GGTGACGCGG CTGCTGTGTA ATCCGGGCGA CGATGCCTGG
ATTGAAGAGC CGGGCTATTG GGGGATCCGC AATATCCTGC GAATGAACGA CGTGAATATC
TGCCCACTGG AAGTTGATGA GGCCGGCATG GTGCCGCCGG AGCAGCCCAG CGGCCCACCA
CGGTTGATAT TTGTCACCCC GTCGCACCAA TATCCGTTGG GATCGGTGAT GAGCCTGGCG
CGGCGACAAC GCTTGCTGGC ACTGGCACGC AACGGCGGCA GCTGGATCGT TGAGGATGAC
TACGACAGTG AATTCCGCTT TTCTGGCCAG CCGATCCCGG CATTGCAGGG GCTGGAAGCC
GACGCACCGG TGATCTATAT CGGCACCTTC AGTAAAACGC TGTACCCGGC GCTACGGCTG
GGCTACGTGG TGTTGCCAAA GCCGCTGGTC GCGGCGTTGA AAACCGCCCA TGCCGAGCTG
TACCGCGGCG GTCATCTGCT GATCCAGACC GCATTGGCGC AGTTTATTCA GGAAGGCCAT
TACACCGCGC ATATTCGCCG CATGCGGCTG CTGTATGCCC GCCGCCGGGC GTTTCTGACC
GCATTGATCG AGCAGCATCT GGGCAAGCAG GCGTTGAGCG AGTTCAACAA CAACGCCGGC
CTGCACCTGA TCCTAAACCT GCCTGACGAG GCGGACGACG TGGCTATCGC CGCCGCTGCC
AACGAACGCG GCGTGCTGGT GCGGCCGCTG TCGCGTTACT ACATGCTGCC CAACCATCGC
CGTGGCCTGC TGATGGGGTT TGCCTGCGTG CCAGAAGAAC AAATGGCCGC CGCCTTTACC
TTGCTGCTGG AATGCATCCG TCCCTGA
|
|---|
| Protein sequence | MRSLSGDLLL QRLGEQPDDK LHKRLYNAIR TSILDGSLPP SSRLPASRDL AQELSLSRNT
VLTVYEQLLA EGYVLARAGS GTFVAETVPD SCLSTASAPA GSDGVQRGIE LSERGAALLH
HASASPKQWG AFIPGVPDVN AFPHQLFSKI QARISRRPAP QKLTYSNQGG SPELQHALVD
YLRVARSVRC SPEQILITEG IHQAIDLVTR LLCNPGDDAW IEEPGYWGIR NILRMNDVNI
CPLEVDEAGM VPPEQPSGPP RLIFVTPSHQ YPLGSVMSLA RRQRLLALAR NGGSWIVEDD
YDSEFRFSGQ PIPALQGLEA DAPVIYIGTF SKTLYPALRL GYVVLPKPLV AALKTAHAEL
YRGGHLLIQT ALAQFIQEGH YTAHIRRMRL LYARRRAFLT ALIEQHLGKQ ALSEFNNNAG
LHLILNLPDE ADDVAIAAAA NERGVLVRPL SRYYMLPNHR RGLLMGFACV PEEQMAAAFT
LLLECIRP
|
|---|
| |