| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cthe_2689 |
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| Symbol | |
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| ID | 4808861 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Clostridium thermocellum ATCC 27405 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009012 |
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| Strand | - |
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| Start bp | 3174251 |
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| End bp | 3175747 |
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| Gene Length | 1497 bp |
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| Protein Length | 498 aa |
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| Translation table | 11 |
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| GC content | 42% |
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| IMG OID | 640108108 |
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| Product | GntR family transcriptional regulator |
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| Protein accession | YP_001039081 |
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| Protein GI | 125975171 |
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| COG category | [E] Amino acid transport and metabolism
[K] Transcription |
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| COG ID | [COG1167] Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain (MocR family) and their eukaryotic orthologs |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 6 |
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| Plasmid unclonability p-value | 0.00169618 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCTGGAAC TGTTTAAGTC TGTAAAACTT GATAAAAATT CAGGCACTCC TTTATATATG
CAACTCAGCG ACAAAATCGC CGAAATGATT GAAAACGGGA TACTTCCGGC TGATCTGAAA
CTTCCTTCAA TACGTCAAAT GTCGGCCTTG CTCAATGTCA ATTCAGTGAC AATAGTGTCC
TGTTACAAAC ACCTGGAAAC AAAAGGCTAT GTATATTCCA GGCCGGGAAG CGGTACGTAT
GTTGCCGTTG TTCTGCCCAA GCAAAGCGAA AATTACTCAG ACCGCAACAT TATACTGGAT
GAGCTTTATC AAAGCGACGA CCTCAACTTA ATCAACAACG GGCATATTAA AATCAATGAA
AATACCATTA ATTTTGCCAG CGCCACCCCC AAGTCAAGTC TGTTTCCGGT GGAAAACTTC
AAGCTTGTTT TAAATGAAGT ACTTGACCGT GACCGGGGAA ACGCTTTTGA CTATCAGGAC
AGTCAAGGCT ATTACCCTTT GCGTTCGTCA GTCCGCATTC TGCTCGAAAA AAGAAAAATT
GCGTGTCATG AGGAAAATAT TCAGATCATT TCCGGCGCGC AGCAGGGAAT AGATATAATT
GCCAAAGCCC TGTTGAGGCA GGGTGACTAT GTGATTACCG AAAGTCCCAC CTATACGGGA
GCTATAGCGG TATTTAAATC AAGAGGAGCG GAAATCGCCG ATGTTCCCTT GTCTTGTGAC
GGTCCGAATC TTAATATCCT TGAGTACAAC CTTAAAAAAT ACAAACCAAA GCTTATTTAC
ACAATACCGT CTTTTCAGAA TCCTACAGGG ATATCATATT CCAATGAGAA AAGGAAGGAA
ATTTTGGCCC TTGCGGAAAG GTATGACGCT TATATTATCG AGGATGATTA TGTAAGCGGA
CTGGACTTTG AAAATATGGG GTTTGCCACC GTTAAATCCA TGGATAAATC CGACAGAGTT
ATATTTCTCA AAAGTTTTTC CAAGATTTTT ATGCCGGGAC TCAGGCTTGG CTTTATGGTT
GTGCCGTCAA GCCTTAAAAG TTATATAATA GAAGCAAAAC ATGCAACGGA CATATCCACC
TCCGGACTTA TCCAGAGGGC TTTTGACCTT TATATAAGAA AAGGAATGTG GGACGGGCAT
TTTAAACTAA TGTTCAATAT TTACAAAGAA AGGTATTATA AAACTATAGA AGCTTTGGAA
AGGCATCTTC CCCAAAATGT TCAGTTCCAC AAGCCCGGAG GCGGCCTGAA TATTTGGCTC
GAGCTTCCAG CAAACTGCTT TACAGGCAGC CTGTTAAAGG CTGCGTCTGC CGAGAATATT
GTGTTTGCTC CCGGTAGGAT CTTCTACAGC AGTACGCCAA CCAATCTCAA CAATATAAGG
TTAAGCTTTG CCGCAGTTGA CGCTGATGAA ATTGAAAGGG GCATTGAAAA ACTTTCCGAA
TTGATTTTAC GCTTTGACAG GAACAAGTCC CTGACAGATA ATATTCCAAT ACTGTAA
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| Protein sequence | MLELFKSVKL DKNSGTPLYM QLSDKIAEMI ENGILPADLK LPSIRQMSAL LNVNSVTIVS
CYKHLETKGY VYSRPGSGTY VAVVLPKQSE NYSDRNIILD ELYQSDDLNL INNGHIKINE
NTINFASATP KSSLFPVENF KLVLNEVLDR DRGNAFDYQD SQGYYPLRSS VRILLEKRKI
ACHEENIQII SGAQQGIDII AKALLRQGDY VITESPTYTG AIAVFKSRGA EIADVPLSCD
GPNLNILEYN LKKYKPKLIY TIPSFQNPTG ISYSNEKRKE ILALAERYDA YIIEDDYVSG
LDFENMGFAT VKSMDKSDRV IFLKSFSKIF MPGLRLGFMV VPSSLKSYII EAKHATDIST
SGLIQRAFDL YIRKGMWDGH FKLMFNIYKE RYYKTIEALE RHLPQNVQFH KPGGGLNIWL
ELPANCFTGS LLKAASAENI VFAPGRIFYS STPTNLNNIR LSFAAVDADE IERGIEKLSE
LILRFDRNKS LTDNIPIL
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