Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bcen2424_6395 |
Symbol | |
ID | 4453938 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia cenocepacia HI2424 |
Kingdom | Bacteria |
Replicon accession | NC_008544 |
Strand | + |
Start bp | 594631 |
End bp | 596043 |
Gene Length | 1413 bp |
Protein Length | 470 aa |
Translation table | 11 |
GC content | 70% |
IMG OID | 639698459 |
Product | GntR family transcriptional regulator |
Protein accession | YP_840019 |
Protein GI | 116686772 |
COG category | [E] Amino acid transport and metabolism [K] Transcription |
COG ID | [COG1167] Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain (MocR family) and their eukaryotic orthologs |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 29 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 22 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGCATCAG ACAAACTTTC TGGCGAGCGC GATGGCGGCC TGCCGGCACC GGCGAAGCGA CCGACCTACG TCGAGGTCTC GAGCTCGATC GAGGCGGAAA TCCGCAACGG CATGTATCCG CCCGGCAGCC GCCTGCCGCC GCAGCGCCAG CTCGCGACCG AACTCGGCAT CAACGTGTCG ACGGTGTCGC GTGCGTACAA GGAATTGCAA CTGCGCGGCC TCGTGATCGG CAGCAAGCGT CGCGGCTCGC TCGTCACCGG TGGCGCGATG CCGAGCATCG AGCCGGCCCG CGCGTCGCTT GCGGCGGGCA ACGGCGTGAT CGACCTGACC GTGAACCGCC CGGCGACGGG CGAATTTCTC GCGAGCCTCG CGCAGACCTT CGCCACGCTG CCGAACGACC CGCGCTTCGC CGCGCTGCAG GAATACCAGC CGCCGCAAGG CCCCGACTGG GCGCGTGCGG CCGGCGCGCA GTGGCTGGCC GCGCCGGGCT TCGCGCCGTC GCCCGACCAG GTGGTCGTCA CGAGCGGCGC GCAGCACGGG CTGTATGCGG TACTCAACAG CCTGATCGGC ACCGACGGTG TGATCGTCGC CGACCGCCTC ACGTATTACG GGCTCAAGGC GCTCGCGCCG GTGTTCCAGT TCGAGATCGT CAGCGCGCCA GCCGACGACG ACGGCCTGCT GCCCGACGAG ATCGAACGGA TCTGCCAGCG CATGCCGGTC AAGGCGATCT TCGTCGTGCC TAATCTGCAA AACCCGACCG TGACGACGAT GAGCCTCGCG CGCCGCATGG CGCTCGTCGA CATCGCGCGG CGCCATCACG TGACGATCAT CGAGGACGAC GTGTACGGCC CGCTCGTGCG CGACCGGCTG CCGGCGATCG CGGGGCTGTG CCCGGAGCTG ACGTTCCATA TCGGCGCGAC GTCGAAGATC CTCGCGCCGG GGCTGCGCCT CGGCTACCTG AGCTGTCCGC GCGACAGCGT CGCGCTGTGC GCGGAAGCCG TGCGGACCAC CGCATGGATG CCGGCGCCCA CGTCGATGTT GATCGCGACG GTATGGATCG AGGACGGCAC CGCCGAGCGG ATCATGGCCG CGCAACTCGC GGAGATTCGC GCACGCGTCG ATCTCGCGCG GGAACTGCTG CCGGCCGGGC AACTGAAGGC CGACCCCGCC TGCATGTTCG TGTGGCTGCG GCTGCCGCCG CCGTGGCGGG CCGACGACTT CGCCGCGAAT GCGAAAGCGC GCGGCGTGAT CGTGATGCCG TCGTCGACTT TCGCGGTCGA CCGCGCGGAA CTCGAGCACG GCGTGCGCAT CAACCTCGCG TGCCCGGCCA CCCGCGACGA ACTCGTCAAC GGGCTGCGCA TCCTGTCCGG CACGCTGAAG GACCGGCCGC GCGCGCTGTT CGGTTCGATC TGA
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Protein sequence | MASDKLSGER DGGLPAPAKR PTYVEVSSSI EAEIRNGMYP PGSRLPPQRQ LATELGINVS TVSRAYKELQ LRGLVIGSKR RGSLVTGGAM PSIEPARASL AAGNGVIDLT VNRPATGEFL ASLAQTFATL PNDPRFAALQ EYQPPQGPDW ARAAGAQWLA APGFAPSPDQ VVVTSGAQHG LYAVLNSLIG TDGVIVADRL TYYGLKALAP VFQFEIVSAP ADDDGLLPDE IERICQRMPV KAIFVVPNLQ NPTVTTMSLA RRMALVDIAR RHHVTIIEDD VYGPLVRDRL PAIAGLCPEL TFHIGATSKI LAPGLRLGYL SCPRDSVALC AEAVRTTAWM PAPTSMLIAT VWIEDGTAER IMAAQLAEIR ARVDLARELL PAGQLKADPA CMFVWLRLPP PWRADDFAAN AKARGVIVMP SSTFAVDRAE LEHGVRINLA CPATRDELVN GLRILSGTLK DRPRALFGSI
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