| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Amir_5490 |
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| Symbol | |
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| ID | 8329696 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Actinosynnema mirum DSM 43827 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013093 |
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| Strand | - |
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| Start bp | 6522890 |
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| End bp | 6524023 |
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| Gene Length | 1134 bp |
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| Protein Length | 377 aa |
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| Translation table | 11 |
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| GC content | 75% |
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| IMG OID | 644945930 |
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| Product | putative transcriptional regulator, GntR family |
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| Protein accession | YP_003103154 |
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| Protein GI | 256379494 |
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| COG category | [E] Amino acid transport and metabolism
[K] Transcription |
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| COG ID | [COG1167] Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain (MocR family) and their eukaryotic orthologs |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.110442 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GTGCGCTCCC TTTCCGTGCC CAGCTCGCCC GTCCGCGACC TGCTCGCCCT CACCTCGCGC
CCCGAGGTGA TCTCCTTCGC GGGCGGCCTG CCCGCGCCCG AGCTGTTCGA CCTCGACGGC
CTCCGCGCCG CCGCCGACCG CGCCCTCACC CGCCGCACCC TCCAGTACGC GCCCACCGAA
GGCGACGCCG ACCTGCGAGA ACAGGTCGCG GCCCGGCTCA CCGCGCGCGG CCTGCCCACG
CGACCCGACG AGCTGCTGAT CACCACCGGG TCCCAGCAGG CGCTCACCCT CGTGGTCACC
GCCCTGCTCG AACCCGGCTC CGTCGTCGCG GTCGAGGAAC CGACCTATCT CGCCGCGCTC
CAGTGCTTCC ACCTCGCGGG CGCGCGCGTG GTCGCGGTCC CCGGCGACGA GCGCGGCATC
GACCCGGTCG CGCTCGCCGA GGTCGTCGAG CGCGACCGGC CCGAGCTGCT CTACCTGGTG
CCGACCTTCG CCAACCCGAC CGGCCGCACC CTCGACGCCG AGCGGCGCGC CGAGGTCCTC
CGCGTCGCCG AGCGCTCCGG GCTCCGCGTG CTGGAGGACG ACCCGTACAG CGAGCTGCGC
TACCGGGGGG ACGCGGTGCC CGCGCTGGCC GCGTCGAGCG ACCTCGTGCT GCACCTGGGC
ACGTTCTCCA AGATCGGCGC ACCGGGCCTG CGGGTCGGCT GGCTGCGCGC GCCCGAAGAG
CTGATGCCCG CGCTCGTGGT CACCAAGCAG GCCGCCGACC TGCACACCTC CGCGTTCGAC
CAGGCCGTTG TCGCGGACTA CCTGCGGGAG AGCGACCTCG ACGCGCACGT CCGGCGGTTG
TGCGCGACCT ACCGGGAGCG GCGGGACGCG CTGGTCGGCG CCCTGGCGGC GGTGCTGCCC
GAGGGGGCGG TGCGGACCGA CCCGGACGGC GGGATGTTCG TGTGGGTCCG GCTGCCCGGA
GAGGTGGACG CGGCGGTGGT GCTGCGGCGG GCGCTGGAGC GGGACGTGGC GTTCGTGCCG
GGCGCCTCCT TCTACGCGGG TGAACCTGAC CGGGCGACGA TGCGGCTGTC GTTCACCACC
GGCGCCCCCG AGGTCATCCG GGAGGGCGTG CGGAGGCTGG GGGAGGTGCT GTGA
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| Protein sequence | MRSLSVPSSP VRDLLALTSR PEVISFAGGL PAPELFDLDG LRAAADRALT RRTLQYAPTE
GDADLREQVA ARLTARGLPT RPDELLITTG SQQALTLVVT ALLEPGSVVA VEEPTYLAAL
QCFHLAGARV VAVPGDERGI DPVALAEVVE RDRPELLYLV PTFANPTGRT LDAERRAEVL
RVAERSGLRV LEDDPYSELR YRGDAVPALA ASSDLVLHLG TFSKIGAPGL RVGWLRAPEE
LMPALVVTKQ AADLHTSAFD QAVVADYLRE SDLDAHVRRL CATYRERRDA LVGALAAVLP
EGAVRTDPDG GMFVWVRLPG EVDAAVVLRR ALERDVAFVP GASFYAGEPD RATMRLSFTT
GAPEVIREGV RRLGEVL
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