Gene YpsIP31758_1217 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagYpsIP31758_1217 
Symbol 
ID5388274 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameYersinia pseudotuberculosis IP 31758 
KingdomBacteria 
Replicon accessionNC_009708 
Strand
Start bp1434136 
End bp1435641 
Gene Length1506 bp 
Protein Length501 aa 
Translation table11 
GC content54% 
IMG OID640864195 
ProductGntR family transcriptional regulator 
Protein accessionYP_001400198 
Protein GI153950741 
COG category[E] Amino acid transport and metabolism
[K] Transcription 
COG ID[COG1167] Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain (MocR family) and their eukaryotic orthologs 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones55 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
TTGCGATCAC TGCTTTCTGA CCTGCTGTTA CAGCGCCTGA CACCGGCTAC CCTCTCTACG 
GTTCCAGTGG CTAAAAATAA GCGGCTCTAC CGTGCGCTGC GTTTATCTAT TCTGGACGGC
AGCATCCGTG CCGGTAGCCG CTTACCGGCC TCACGTGATC TGGCACAAGA ACTGGAGATT
TCGCGCAATA CGGTGCTGGC CGCCTATGAC CAATTACAGG CAGAAGGCTA TATTCAGACA
CGTACCGGCG GCGGTACCTT TGTGACCACT GATTTGCCAG AAGACGGGCT GAACAAAATG
GATACCCTGC CCCAGCATAG TGGGCCAGAA CCTGATGTGG CCCTGTCTAC ACGCGCTACC
CACCTGCTGA ACCACTGCGG CGTGGCGTCC TATCAATGGG GCACCTTCAT GCCCGGCGTG
CCAGATGTCA GGTTATTTCC CCATGAGGTG TGGCGTAAAT TACAAACGCG TCTCAGCCGC
CATTTGAATC CAGAAAATCT GACTTATTCT GTTCATGGCG GTTGTCCGCA ATTGCAGCAA
GCGTTGGCCG ACTATCTGCG AATTGCCCGT TCCGTTTCCT GTACTCCGGA TCAGATTTTG
ATCACTGCGG GCACGCATCA GGCACTGGAT TTGTTGGCAA AAATGTTATG CGACCCGGGC
GATCACGCCT GGATTGAAGA ACCCAGCTAC TGGGGGATCC GCAACGTGTT AACCATCAAT
GGCATAGAGG TCATCCCCGT GTCAGTGGAC GAAAATGGTA TGGATCCACT GGATTTACCG
TTTGAATCGC GCTCGCCACA TCTTATTTGC GTGACGCCAT CCCATCAATA TCCGTTAGGC
TCGGTGATGA GCCTGACACG ACGTCAGCGT ATTTTGGCGT TGGCGCAGCA GCATAACTGC
TGGGTGGTGG AAGATGATTA CGACAGCGAG TTCCGTTTTT CAGGCAGTCC GATCCCCGCG
CTGCAAGGGC TGATCCCCGA TGCGCCCGTC ATTTATCTCG GTACCTTCAG TAAAACCCTG
TATCCAGGGA TGCGTATCAG CTACATGGTA CTGCCACGCC CACTGGCGCA GCAGTTCAAG
GTAGCACATT CCGAGTTATA CCGTGGAGGA AATGGGATGA TGCAACTGAC GCTGGCAGAA
TTTATCCGCG AAGGCCACTA TGCCTCCCAT ATCCGTCGTA TGCGGTTGAT ATATGGCAAG
CGCCGGGCCG CACTGGTTGG CATGATCAAA CAACAGCTTG GGGGATCATT TCTCGCGGAA
TACGGTAACG CGGGGCTGCA CCTGATTCTG GCTTTACCGG AGTCTATTGA TGACGTGGCG
TTAAGCGCTG AACTGGAGCA GAAAGGGGTA CTCGTCCGTG CGCTCTCTGG CTATTACTTA
AAAAGTCCCC CGCGACGAGG GCTGTTACTC GGTTATGGTT GCGTACCAGA GGAGGCGATG
GAAGCCGTAT TCGCACCGAT AGTCAGCTAT CTCAGACGGC GGATAAACCC CGATGACGCG
ATCTGA
 
Protein sequence
MRSLLSDLLL QRLTPATLST VPVAKNKRLY RALRLSILDG SIRAGSRLPA SRDLAQELEI 
SRNTVLAAYD QLQAEGYIQT RTGGGTFVTT DLPEDGLNKM DTLPQHSGPE PDVALSTRAT
HLLNHCGVAS YQWGTFMPGV PDVRLFPHEV WRKLQTRLSR HLNPENLTYS VHGGCPQLQQ
ALADYLRIAR SVSCTPDQIL ITAGTHQALD LLAKMLCDPG DHAWIEEPSY WGIRNVLTIN
GIEVIPVSVD ENGMDPLDLP FESRSPHLIC VTPSHQYPLG SVMSLTRRQR ILALAQQHNC
WVVEDDYDSE FRFSGSPIPA LQGLIPDAPV IYLGTFSKTL YPGMRISYMV LPRPLAQQFK
VAHSELYRGG NGMMQLTLAE FIREGHYASH IRRMRLIYGK RRAALVGMIK QQLGGSFLAE
YGNAGLHLIL ALPESIDDVA LSAELEQKGV LVRALSGYYL KSPPRRGLLL GYGCVPEEAM
EAVFAPIVSY LRRRINPDDA I