| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bpro_2911 |
|---|
| Symbol | |
|---|
| ID | 4014408 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Polaromonas sp. JS666 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007948 |
|---|
| Strand | - |
|---|
| Start bp | 3072663 |
|---|
| End bp | 3074078 |
|---|
| Gene Length | 1416 bp |
|---|
| Protein Length | 471 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 63% |
|---|
| IMG OID | 637942574 |
|---|
| Product | GntR family transcriptional regulator |
|---|
| Protein accession | YP_549723 |
|---|
| Protein GI | 91788771 |
|---|
| COG category | [E] Amino acid transport and metabolism
[K] Transcription |
|---|
| COG ID | [COG1167] Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain (MocR family) and their eukaryotic orthologs |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 27 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 12 |
|---|
| Fosmid unclonability p-value | 0.86551 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCTCACAC TTCGCCCGGA ACTCCAGACT CCACTGGTGA GCCAGATCGT CGACGGTCTG
CGTGGAATGA TTGCCGGGCA AACCCTGAAA CCTGGGGTCA AACTGCCCTC TATCCGCGGT
TTCGCCGCCG CGCACGGGGT CAGCGTCTTC ACGGTGGTGG AGGCCTACGA CCGCCTCGTC
GCCCAGGGTT GGCTCGTTTC ACGTGCCAAC GCCGGTTTTT TCGTCAAACG CAGGGGCGAT
GATGGTGCAT CGGGCGCTCC GTATGCGCAG CCCGAGCAGC CTAAATTTGA TGCGCGCTGG
TACCTCAAGC AGATTTTTGA GAACCGTAAT CTGCCGATGA AGCCAGGGTG CGGCTGGTTG
CCGCACGACT TTCTCTTCGG TGACGCGCTG CGGCGCAGCA TGCGGCACCT GTCGGCCGAC
GGGTCCTCGC TGGAGGGTTA CGGCCTTCCC TACGGGCACA TGGCCTTGCG CATGGTCATT
GCGGAGGCGC TGGCCGAAAA CCAGATCGCG GTCGAAGTGG ACCAGGTGCT GCTGACGCAG
GGGTCCAGCC AGGCGCTTGA CCTGGTGGCT CGCCAACTGG TCAAGCCGGG CGATACGGTG
CTGGTGGACA GCCCCGGTTA CCCCAACCTG ATGTTCATGC TGCGCTTTCT GGGCGCCAAC
CTGATAGGCG TGCCGCGTAC CCCCACGGGT TACGATCTCG CCGCTCTTGA GTCCCTGCTG
GCCACCCACA AGCCGAGGGC TTTCTTCACG CAACCCCGCC TGCAGAGCCC GACCTGCTCA
ATTGCGTCGG CGGCCCATCT GCACCGCCTG CTGCAACTGG CTGAAACCCA CGGGTTCACT
CTGGTGGAGA ACGATATCTA CGCCGATATG GACCCGATGC CCCGGTCCAC CCTGGCGAGC
CTAGACCAGT TGCGGCGCGT GGTGTACATC GGCAGCTATT CAAAAACAAT TTCGCCCAAC
CTGCGCGTAG GCTACCTGCT GGCCGGGCGC GACCTGATTG AGGATCTGGC CCAGCTCAAG
ATGATTTCGG GGCTCACATC CTCGGACATC GCCGAGCGGC TCACTTTTGG GGTGGTCACC
GATGGCCGCT GGCGCAAACA CCTCAAGTCG CTTCGCGAGC GCCTGGCCCT GGCGCACCGC
AAGACAGAGA AAAGCCTGAC CGGTCTTGGG TTTGAGCTCT TTCATGAGCC GGGGGCCGGC
ATGTACCTGT GGGCCCGGCA CCCTGATCTC CCCGATAGCG CCGTGCTTTC CCAGGACGCG
ACGACCGAGG GCATCATGCT CGGGCCGGGG CAACTGTTTT TGCTCGAACC CCATCCCACG
GGCTGGCTTC GCTTTAACGT GGCTTTCAGC GACGATGAAC GTTTATGGCG GTTTTTGTCC
CGACGAATTG ATCTGGGCCG GCAGACCGCC CAATAA
|
|---|
| Protein sequence | MLTLRPELQT PLVSQIVDGL RGMIAGQTLK PGVKLPSIRG FAAAHGVSVF TVVEAYDRLV
AQGWLVSRAN AGFFVKRRGD DGASGAPYAQ PEQPKFDARW YLKQIFENRN LPMKPGCGWL
PHDFLFGDAL RRSMRHLSAD GSSLEGYGLP YGHMALRMVI AEALAENQIA VEVDQVLLTQ
GSSQALDLVA RQLVKPGDTV LVDSPGYPNL MFMLRFLGAN LIGVPRTPTG YDLAALESLL
ATHKPRAFFT QPRLQSPTCS IASAAHLHRL LQLAETHGFT LVENDIYADM DPMPRSTLAS
LDQLRRVVYI GSYSKTISPN LRVGYLLAGR DLIEDLAQLK MISGLTSSDI AERLTFGVVT
DGRWRKHLKS LRERLALAHR KTEKSLTGLG FELFHEPGAG MYLWARHPDL PDSAVLSQDA
TTEGIMLGPG QLFLLEPHPT GWLRFNVAFS DDERLWRFLS RRIDLGRQTA Q
|
|---|
| |