| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rpic_4705 |
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| Symbol | |
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| ID | 6285117 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ralstonia pickettii 12J |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010678 |
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| Strand | + |
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| Start bp | 1048849 |
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| End bp | 1050267 |
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| Gene Length | 1419 bp |
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| Protein Length | 472 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 642619181 |
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| Product | transcriptional regulator, GntR family with aminotransferase domain |
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| Protein accession | YP_001893216 |
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| Protein GI | 187926871 |
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| COG category | [E] Amino acid transport and metabolism
[K] Transcription |
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| COG ID | [COG1167] Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain (MocR family) and their eukaryotic orthologs |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 19 |
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| Fosmid unclonability p-value | 0.00798058 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGAAACTCC AGATCGACCC CGCCACCCGC GTGCCCATCT CCGACCAGAT CGTTGCGGGC
GTGCAGGCCT GGATTGGCGA CAACGACGTC CGGCCGGGCG CCAAGCTGCC GTCCATTCGC
CAACTGGCGG CGGAATATGG CATCAGCCGC TTTCCCGTCA TCGAGGCATA TGACCGGCTC
GTTTCGCTTG GGCTGCTGGA CTCGCGCCAC GGATCGGGCT TCTACGTGGC CGAGAGCGGA
CTGACCGGAC GAGACGGACG GGGCTGGACG GACCCGCGCC GGGCAGAGGC CGAATCCAAG
CACATCTTCG AGCAGTTCAG TTACCCCGAC GGCATGCTCA AGCTCGGCGG CGGTTTCGTG
CCCGCCGACT GGCGCGACAT GGATGGCCTC ACGCAGGCCA TTCGCCAGGT GTCTCGCACG
GACACGCACG CCGTGATCGA CTACGCGCCG CCGCTGGGCA ATCCTGCGCT GCGCCAGCAG
ATCATGATGC GCGCCCGGCA GCTGGGGGTG CAGGCCGAGC TGCCCAACGT GATGATCACG
GCGGGCACCA GCCAGGCCAT CGACCTCGTC ATTCGCCATC TGCTCAAGCC GGGCGATACG
GTGTTCGTCG AAGACCCGGG TTATTACACC GTCTTCGGCC TGCTGCGGCT GCACGGCGTG
AAGCTGGTCG GCATTCCGCG CAAGGCCGAC GGCCCCGATG TCGATGTGGC CGAGGCCATG
TTGCGCGAGC ACCGTCCCAA ACTGTTCATC ATCAATAGCG TGCTGCAGAA CCCGACGGGC
TCGACCTTGT CGCCGCCGGT CGCGTTCCGC CTGCTGGAGC TGGCACGGCG CCATGGCTTC
GTCTTTCTGG AAGACGACAT CTTTGCCGAC CTGCAGGCCG ACCCGACCGC CCGGCTGGCC
ACGCTGGATC AGATGGAACA CGTCATCTAC GTTGGCGGCT TTTCCAAGAC GGTGTCGGCG
TCGTTGCCGG TCGGCTATCT GATTGCCAAG CGCGAGCTCG TGCACGATCT CACCAACGTG
AAGATGCTGA CCAGCGTGGG CGGCTCGCGC TTTGCCGAGG CCGTGGTGAC CACGCTGCTC
GAGCGCGGTG CCTATCGGAA GTATGTGGAG CGGCTGCGCC AGCGCATCGG TGATTCGGTC
ATCGCGTCGC TCGATGTGCT GTCCGATGCC GGGTGGGAGG TCTTCCATCA TCCGCCGGGC
GGCAACTTCC TGTGGGCCCG CGTGCCGCAT GTGGAGGATT CGCGCGACCT GGCCGCCGTC
GCGGAAAAGC ATGGCGTGAC GCTCGCACCG GGGCACTATT TCCGCCCGAA CATGGAAGTC
TCGCCCTGGG TACGCATCAA CAGCGCCTAC GTGAATGAGC CGCGTGCGCT GGCATTCCTG
AAGGAAGCGG GGCGTCGCCC TGCGCGCAAG CGCGCCTGA
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| Protein sequence | MKLQIDPATR VPISDQIVAG VQAWIGDNDV RPGAKLPSIR QLAAEYGISR FPVIEAYDRL
VSLGLLDSRH GSGFYVAESG LTGRDGRGWT DPRRAEAESK HIFEQFSYPD GMLKLGGGFV
PADWRDMDGL TQAIRQVSRT DTHAVIDYAP PLGNPALRQQ IMMRARQLGV QAELPNVMIT
AGTSQAIDLV IRHLLKPGDT VFVEDPGYYT VFGLLRLHGV KLVGIPRKAD GPDVDVAEAM
LREHRPKLFI INSVLQNPTG STLSPPVAFR LLELARRHGF VFLEDDIFAD LQADPTARLA
TLDQMEHVIY VGGFSKTVSA SLPVGYLIAK RELVHDLTNV KMLTSVGGSR FAEAVVTTLL
ERGAYRKYVE RLRQRIGDSV IASLDVLSDA GWEVFHHPPG GNFLWARVPH VEDSRDLAAV
AEKHGVTLAP GHYFRPNMEV SPWVRINSAY VNEPRALAFL KEAGRRPARK RA
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