| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bphyt_1108 |
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| Symbol | |
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| ID | 6280982 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia phytofirmans PsJN |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010681 |
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| Strand | - |
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| Start bp | 1247214 |
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| End bp | 1248629 |
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| Gene Length | 1416 bp |
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| Protein Length | 471 aa |
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| Translation table | 11 |
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| GC content | 58% |
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| IMG OID | 642620667 |
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| Product | transcriptional regulator, GntR family with aminotransferase domain |
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| Protein accession | YP_001894748 |
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| Protein GI | 187923106 |
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| COG category | [E] Amino acid transport and metabolism
[K] Transcription |
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| COG ID | [COG1167] Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain (MocR family) and their eukaryotic orthologs |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 48 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGATGCGAA CATCTGGCTG GACTCCAATT CTCGAAGGCG GGAATGGTCC GACGTATCTG
GCAATTGCCA ATGCCGTCGC TGAAAGCATA AATAAGGGTG AGCTCCGCGT CGGCGACAGA
TTACCCCCGC AACGTTCACT GGCCGCATTA CTCGGCATCG ACTTCACAAC CGTTAGCAGG
GGCTATGCCG AGGCCCAGCG ACGAGGTCTG CTCGAGGCTC GCGTGGGTCG CGGCACCTAT
GTGAAGGCGA TACAGCGTCC GTCTGCCACT CTAACGAACG TGTCCGGCAT CGACATGTTG
ATAAATCAGC CCCCGCCGTT CGACGACCCC ACGCTTGAGA AGCGCATCTG GGAAGGTGTG
CCTGCAATGC TGGCCGAGCG CGGCATGGAA ATGCTCATGC GCTACCAGGT GCCGAGCGGA
GCCATGAGAG ACCGTCTGGT GGGGGCGAAC TGGCTCACTC AACGTATTCC GGGCCTCGGA
CCTGAGCGCG TCCTTGTTTG CCCCGGCGCA CAAGGCGCAC TCCTTGCCGT CTCCATGATG
TTGGCAAGCG CGGGAGACAC CATTTGCGTA GAGGCGTTGA CGTATCCAGG CTGCCTCCTG
CTTGCGAAGG AACTGGGTGT TCGTCTGTCG GCGGTCGAAA TGGACGAGCA CGGAGCGATG
CCTGAATCAC TTGACGCGAT TTGCCGATCC GAGAAACCGA AGGCGTTCTA TTGCACTCCC
ATTGTTCACA ATCCCACCAC GATTACGATG CCGCTGGACC GGCGCATCGC TTTAGTCGAA
GTAGCGCGCC GTCACAAACT CCCCATCATC GAAGATGACA ACTATTGGCC TCTGGTCAAC
TCGCCCGACG ATTCTGCCGA TGCCTTGCGC GAACTTCCCG CTCTAGCGTC GCTGGCGCCC
GAGTTGGTGC ATTACATATC GGGACTGGCG AAATGCGTGT CGCCCGCATT GCGAATCGCC
TATCTGGCCG TACCTGACCA AAGCTCCGCA GAGAGAGCAT CCGTCGTGAT ACGTGCGACG
GCATCGATGG CCGCGCCGTT GAGCGCCGCC GTTGCTACTT ACTGGATTGA ATCTGGTTTG
GCAGAAGAGA TGCTCAGTGC GATACGCACA GAAAGTGAAG CACGCCAAGC TATCGCGCAC
CGGCACCTAG CTGCTGACCT GGAAAATCGA CATGGTTACG GCTTTCATTT GTGGCTGCCA
TTACCCGTGC CTTGGACATG CAACGCGTTC ATAACCCAAC TGAAGCTTTC AGGTATATCC
GTCGCGGGTA CTGACGCCTT TTCGGTTTCC GAGGCACCCG ATGGTGTCCG ACTCTGCTTA
GGCGCGCCGA GAACACGTAA CGACCTTGAA AATTGCATGC GTCGAATCGC CGACATCCTG
CATCTCAAAT CGTATGAACC GAGTCAAGTA ATCTGA
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| Protein sequence | MMRTSGWTPI LEGGNGPTYL AIANAVAESI NKGELRVGDR LPPQRSLAAL LGIDFTTVSR
GYAEAQRRGL LEARVGRGTY VKAIQRPSAT LTNVSGIDML INQPPPFDDP TLEKRIWEGV
PAMLAERGME MLMRYQVPSG AMRDRLVGAN WLTQRIPGLG PERVLVCPGA QGALLAVSMM
LASAGDTICV EALTYPGCLL LAKELGVRLS AVEMDEHGAM PESLDAICRS EKPKAFYCTP
IVHNPTTITM PLDRRIALVE VARRHKLPII EDDNYWPLVN SPDDSADALR ELPALASLAP
ELVHYISGLA KCVSPALRIA YLAVPDQSSA ERASVVIRAT ASMAAPLSAA VATYWIESGL
AEEMLSAIRT ESEARQAIAH RHLAADLENR HGYGFHLWLP LPVPWTCNAF ITQLKLSGIS
VAGTDAFSVS EAPDGVRLCL GAPRTRNDLE NCMRRIADIL HLKSYEPSQV I
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