Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bamb_6017 |
Symbol | |
ID | 4314921 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia ambifaria AMMD |
Kingdom | Bacteria |
Replicon accession | NC_008392 |
Strand | + |
Start bp | 569482 |
End bp | 570894 |
Gene Length | 1413 bp |
Protein Length | 470 aa |
Translation table | 11 |
GC content | 68% |
IMG OID | 638153861 |
Product | GntR family transcriptional regulator |
Protein accession | YP_777895 |
Protein GI | 115360758 |
COG category | [E] Amino acid transport and metabolism [K] Transcription |
COG ID | [COG1167] Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain (MocR family) and their eukaryotic orthologs |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 0.488047 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 18 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGGACGGA CCGAGGTATC GGCGCGCTGG CACGACGCGA TCGGCGCGGT GCACGGCATC GAGTCGAAAT ACAAGCGGCT CGTGAAGGCG ATCGCCACCG ACATCGAAAG CGGCGCGCTC GCACCGGGCG CGCGGCTCGC GCCGCAGCGC GACGTGGCGT CGAGCCTCGG CGTCAGCGTG CAGACCGTCA CCAATGCCTA CAAGGAACTC GAAAGGCAGG GGCTGATCCG CTGCGAAGTC GGGCGCGGCA GCTTCGTGGC CGCCCGCGTG ACCGAATCGA TGTCGAACTA CATCCTCGAT ACGGCCGAGC GCGAGCTGGT CGACTTCTCG ATCGCGCGCA TCGTGCATAC GCCGGAGCAC GATGCCGCGT GGCGGGGCGT CTGCGCGGCG ATGGCCGACA CCGACGACCA GCCGTGGATC CGCTCGTTCC GGCCGATCGC GGGCCTCGAC GCGCATCGCG AGGCCGGCGC CGCGTGGCTC GGGTCGCTGA ACCTGCCGGT CCATCCCGAA TCGCTGCTGA TCACGAACGG CGCGGCGCAC GGCATCTTTC TCGCGCTCGC GTCGATCGTC GGGCCGGGCG ACACCGTGCT GTGCGAGAGC CTGACCGACC ACGGCGTGAT CGGCTCGGCG AACGTGCTCG GGTTTACGCT GAAAGGGCTC GAGATGGACG AACATGGGAT CCGTCCCGAA CATTTCGAAG AAATGTGCGA CGGCGAGCGG ATCAGTGCGC TCGTCTGCAC GCCGACCCTC AATAACCCGA CGGTGTCGAT GATGTCCGAT TCGCGCCGCA AGTCGATCGC GCGCATCGCG TCGCGCTACG GCGTGTACGT GATCGAGGAC GACGTGTACG GCCCGCTCCC TGCGAAGACG GCGACTCCGA TCGCGAGCCT GATTCCGGAG CTGGGCTTCT ACTGCACGAG CATGACGAAA TCCGTGCTCA CCGGATTGCG CACCGGTTAT CTCGCGATGC CGAGGCGGCT CGCGTTGCGC GTCGAGAGCG TGCTGCGCGT GAGCAGCTGG ATGGCGACGT CGCCGATCGC GGAGATCGCG ACGCGCTGGA TCGCCGACGG CACAGCGCGC AGGCTCGTCG AACTGCAGCG GCAGCGGCTC GCGGCGCGTC AGGAGATGGT GAAGGCCGCG CTTGGGCCCT ATGTGCTGGG TGCGCATCCG AATGCATTGT CGGCGTGGCT GCGCGTGCCC GACTACTGGC AGGCCGACCG GCTCGTGCGC GAATTGCGTA CCCGCAAGAT CGCGGTGACG TCGCCCGACC CGTTCCTCGT CGGCGGCACG GAGCGGCCGA ACGCGGTGCG CGTGTGTATC GGCGCGGAGA CGACGGATGC CGCATGCAAC GCCGCGCTCC AGACCATCGC GGGCGTGTTC GAGCAGTATC CGCACGTGCA CGATTTTCAC TGA
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Protein sequence | MGRTEVSARW HDAIGAVHGI ESKYKRLVKA IATDIESGAL APGARLAPQR DVASSLGVSV QTVTNAYKEL ERQGLIRCEV GRGSFVAARV TESMSNYILD TAERELVDFS IARIVHTPEH DAAWRGVCAA MADTDDQPWI RSFRPIAGLD AHREAGAAWL GSLNLPVHPE SLLITNGAAH GIFLALASIV GPGDTVLCES LTDHGVIGSA NVLGFTLKGL EMDEHGIRPE HFEEMCDGER ISALVCTPTL NNPTVSMMSD SRRKSIARIA SRYGVYVIED DVYGPLPAKT ATPIASLIPE LGFYCTSMTK SVLTGLRTGY LAMPRRLALR VESVLRVSSW MATSPIAEIA TRWIADGTAR RLVELQRQRL AARQEMVKAA LGPYVLGAHP NALSAWLRVP DYWQADRLVR ELRTRKIAVT SPDPFLVGGT ERPNAVRVCI GAETTDAACN AALQTIAGVF EQYPHVHDFH
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