| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pnap_2106 |
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| Symbol | |
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| ID | 4689015 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Polaromonas naphthalenivorans CJ2 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008781 |
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| Strand | + |
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| Start bp | 2244484 |
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| End bp | 2245872 |
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| Gene Length | 1389 bp |
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| Protein Length | 462 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 639835117 |
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| Product | GntR family transcriptional regulator |
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| Protein accession | YP_982336 |
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| Protein GI | 121605007 |
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| COG category | [E] Amino acid transport and metabolism
[K] Transcription |
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| COG ID | [COG1167] Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain (MocR family) and their eukaryotic orthologs |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 0.0493633 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 19 |
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| Fosmid unclonability p-value | 0.356375 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAACAAAA CGACGCAGCA CTGGACCAAG AAACTCGCCC GAAGCGACCG GCCCGCCTAT
CTGCTGCTGG CTGACCTGAT CGCTGAAGAT ATTCGTGCCG GGCGGCTGGC AGCGCGCGAT
CGACTGCCCA CGCTGCGTGA ACTGGCCGCC GACCTGGGTC TCAACTACAC CACGGTGGCC
CGTGGCTACA GCGAGGCGCG CAAACGTGGG TTGATCGATT CCCACGCCGG CATTGGCACC
TATATTCGCG GAACCAGTCC CAGCCTGCCG CTGCGCGGTG GCAGCGGGGC GGAAATGACC
ATGAACCTGC CACCGGAGCC GCAAGACACC GTGCTGCTGC AGCGCATGCA CGACACGGCG
GCACGCATGC TGGAGCGCAC CGATCTCTAT GACCTGCTGC GCTACCAGGA CTTCGGCGGC
ACCGGGCACG ACCGCGAGGT GGGAACCCAG TGGCTGCGCC GCCACGTACC GCATGCAAGC
CTCAGTCAGG TCCTCGTGTG CCCCGGCATC CACAGTGTGC TGACCGCACT GTTTTCTCAA
CTGGCCCGGC CGGGCGAAAT GATCTGTGTG GAGGCGCTCA CTTACCCTGG CGTCAAGGCG
ATTGCCACGC AGTTGGGCAT CCAGCTCCAT GCACTGCCAT TGGACGACGA TGGCCCCTTG
GCCGAGGCCT TTGAGCATGC CTGCAAGACA CTGCATCCCA AAGCCTTGTA CTGCAACCCC
ACGCTGCTCA ACCCGACCAC GACCACCATG ACCCGTTCGC GCCGGGAGGC GCTGGCCGAT
GTGGCCTTGC GTTATGCCAT CCCCATCATC GAAGACGATG CCTACGGGAT GCTGCCCCGG
CAGGTGCCGC CGGCAATGGC TACTTTGGCG CCAGAGCTTA CCTACTACAT CACCGGCTTT
TCCAAATGCT TCGGCGCGGG CCTGCGCAGC GCTTATGTGC ATTCCCCTGG AAGCCGGCAG
TCGCAGCGGC TCGCAGGCGC GTTGCGCGCC ACCACCGTGA TGGCTTCACC GGTGACCAAT
GCACTGGCGA CCTGCTGGGT GGAAGACGGC ACGGCCGACG CCATGGTGGA GGCGATTCGC
ATTGAGTCCG CTGCCCGTCA GGCGCTGGCT GCGCGCTATC TGGGTCCGCA TGGAATGCAG
GCGCCGACCG ATGGTTTTCA CCTCTGGTTG CCGCTCACTT CAGGCTGGAG CCCGGTGGAG
TTCGCGTCCT ACCTGCGCAC CCAAGGCGTC GGCGTGGTCG CGAGTGCCGC CTTTTCCACA
GACGCAGACC CGCCCGATGC GGTGCGTATC TGCCTGGGTG GCCCGATCTC ACGCGAAGAG
TGTGAGCGCG GCCTCAAATT GGTCGCCGAG ACGATTGCCC ACCCGGTTCA TCCGCACGCG
ACGGTGTGA
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| Protein sequence | MNKTTQHWTK KLARSDRPAY LLLADLIAED IRAGRLAARD RLPTLRELAA DLGLNYTTVA
RGYSEARKRG LIDSHAGIGT YIRGTSPSLP LRGGSGAEMT MNLPPEPQDT VLLQRMHDTA
ARMLERTDLY DLLRYQDFGG TGHDREVGTQ WLRRHVPHAS LSQVLVCPGI HSVLTALFSQ
LARPGEMICV EALTYPGVKA IATQLGIQLH ALPLDDDGPL AEAFEHACKT LHPKALYCNP
TLLNPTTTTM TRSRREALAD VALRYAIPII EDDAYGMLPR QVPPAMATLA PELTYYITGF
SKCFGAGLRS AYVHSPGSRQ SQRLAGALRA TTVMASPVTN ALATCWVEDG TADAMVEAIR
IESAARQALA ARYLGPHGMQ APTDGFHLWL PLTSGWSPVE FASYLRTQGV GVVASAAFST
DADPPDAVRI CLGGPISREE CERGLKLVAE TIAHPVHPHA TV
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